RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 C10orf71Q711Q0 1435 aa14.71□□□□□ -0.06
PTPRE-204ENST00000455661 GPR75-ASB3A0A0A6YYF3 556 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 LRRD1A4D1F6 860 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 EIF3DO15371 548 aaKnown RBP eCLIP14.7□□□□□ -0.06
PTPRE-204ENST00000455661 TGFB1I1O43294 461 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 AHCYL1O43865 530 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 POTEJP0CG39 1038 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 PYGMP11217 842 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 GNAZP19086 355 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 RFX1P22670 979 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 KCNJ1P48048 391 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 IL9RQ01113 521 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 RNF207Q6ZRF8 634 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 ZNF804AQ7Z570 1209 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 PALB2Q86YC2 1186 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 ANO3Q9BYT9 981 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 IRS2Q9Y4H2 1338 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 DOT1LQ8TEK3 1739 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 USP17L15C9J2P7 530 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 USP17L13C9JLJ4 530 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 USP17L11C9JVI0 530 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 USP17L18D6R9N7 530 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 USP17L22D6RA61 530 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 USP17L17D6RBQ6 530 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 USP17L19D6RCP7 530 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 USP17L20D6RJB6 530 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 MPHOSPH10O00566 681 aaKnown RBP14.7□□□□□ -0.06
PTPRE-204ENST00000455661 ABLIM1O14639 778 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 TTC4O95801 387 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 GH1P01241 217 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 FESP07332 822 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 CTCFP49711 727 aaPredicted RBP14.7□□□□□ -0.06
PTPRE-204ENST00000455661 RAD23BP54727 409 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 MRPS35P82673 323 aaKnown RBP14.7□□□□□ -0.06
PTPRE-204ENST00000455661 MYL7Q01449 175 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 KCNA1Q09470 495 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 USP17L24Q0WX57 530 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 NFIL3Q16649 462 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 GPATCH4Q5T3I0 446 aaKnown RBP14.7□□□□□ -0.06
PTPRE-204ENST00000455661 USP17L6PQ6QN14 398 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 MOXD1Q6UVY6 613 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 C12orf50Q8NA57 414 aaPredicted RBP14.7□□□□□ -0.06
PTPRE-204ENST00000455661 ZBTB10Q96DT7 871 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 LRMDAQ9H2I8 198 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 OLFML3Q9NRN5 406 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 ASIC3Q9UHC3 531 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 PLIN4Q96Q06 1357 aa14.7□□□□□ -0.06
PTPRE-204ENST00000455661 MYH14Q7Z406 1995 aaKnown RBP14.7□□□□□ -0.06
PTPRE-204ENST00000455661 ARFGEF1Q9Y6D6 1849 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 FOXN3O00409 490 aaPredicted RBP14.69□□□□□ -0.06
PTPRE-204ENST00000455661 THAP12O43422 761 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 SPOPO43791 374 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 LRRN2O75325 713 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 FAM13AO94988 1023 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 SPATA31C1P0DKV0 1188 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 RWDD2BP57060 319 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 MGAT5Q09328 741 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 TTBK2Q6IQ55 1244 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 EGFL6Q8IUX8 553 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 STK32AQ8WU08 396 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 VTI1AQ96AJ9 217 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 MBOAT7Q96N66 472 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 TSC22D3Q99576 134 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 CCDC77Q9BR77 488 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 PLVAPQ9BX97 442 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 BHMT2Q9H2M3 363 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 LRRC19Q9H756 370 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 CYP39A1Q9NYL5 469 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 CPSF2Q9P2I0 782 aaKnown RBP14.69□□□□□ -0.06
PTPRE-204ENST00000455661 CTNNAL1Q9UBT7 734 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 SPATA31A1Q5TZJ5 1347 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 NHSQ6T4R5 1651 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 TCRBV7S2A1N4TA0A589 114 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 USP17L10C9JJH3 530 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 TBX3O15119 743 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 TCEA3O75764 348 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 SNUPNO95149 360 aaKnown RBP14.69□□□□□ -0.06
PTPRE-204ENST00000455661 EYA4O95677 639 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 SLC16A2P36021 539 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 RASSF2P50749 326 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 KRT17Q04695 432 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 SPIRE1Q08AE8 756 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 CBWD6Q4V339 395 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 PRR16Q569H4 304 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 CBWD3Q5JTY5 395 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 CBWD5Q5RIA9 395 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 CGB2Q6NT52 195 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 SLC30A9Q6PML9 568 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 HS2ST1Q7LGA3 356 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 ANKRD35Q8N283 1001 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 MYCT1Q8N699 235 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 PARD3BQ8TEW8 1205 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 INPP5DQ92835 1189 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 RUSC1Q9BVN2 902 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 MYLK2Q9H1R3 596 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 SLAIN2Q9P270 581 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 NKX1-2Q9UD57 310 aaPredicted RBP14.69□□□□□ -0.06
PTPRE-204ENST00000455661 RABGAP1Q9Y3P9 1069 aa14.69□□□□□ -0.06
PTPRE-204ENST00000455661 ADGRA3Q8IWK6 1321 aa14.68□□□□□ -0.06
PTPRE-204ENST00000455661 KLHL33A6NCF5 533 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms