RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 PKP1Q13835 747 aa27.44■■□□□ 1.98
MSH2-203ENST00000454849 MCM6Q14566 821 aa27.44■■□□□ 1.98
MSH2-203ENST00000454849 TJAP1Q5JTD0 557 aa27.44■■□□□ 1.98
MSH2-203ENST00000454849 EEF1DP3Q658K8 133 aa27.44■■□□□ 1.98
MSH2-203ENST00000454849 SLC27A1Q6PCB7 646 aa27.44■■□□□ 1.98
MSH2-203ENST00000454849 PPP4R3CPQ6ZMV5 832 aa27.44■■□□□ 1.98
MSH2-203ENST00000454849 URGCPQ8TCY9 931 aa27.44■■□□□ 1.98
MSH2-203ENST00000454849 CCDC51Q96ER9 411 aa27.44■■□□□ 1.98
MSH2-203ENST00000454849 ZFP42Q96MM3 310 aa27.44■■□□□ 1.98
MSH2-203ENST00000454849 GAD1Q99259 594 aa27.44■■□□□ 1.98
MSH2-203ENST00000454849 PDZD7Q9H5P4 517 aa27.44■■□□□ 1.98
MSH2-203ENST00000454849 UBE2ZQ9H832 354 aaPredicted RBP27.44■■□□□ 1.98
MSH2-203ENST00000454849 COG5Q9UP83 839 aa27.44■■□□□ 1.98
MSH2-203ENST00000454849 ATG2AQ2TAZ0 1938 aa27.43■■□□□ 1.98
MSH2-203ENST00000454849 DDHD2O94830 711 aa27.43■■□□□ 1.98
MSH2-203ENST00000454849 MLH1P40692 756 aa27.43■■□□□ 1.98
MSH2-203ENST00000454849 ALDH7A1P49419 539 aaKnown RBP27.43■■□□□ 1.98
MSH2-203ENST00000454849 FAM187BQ17R55 369 aa27.43■■□□□ 1.98
MSH2-203ENST00000454849 ARSHQ5FYA8 562 aa27.43■■□□□ 1.98
MSH2-203ENST00000454849 TMEM173Q86WV6 379 aaPredicted RBP27.43■■□□□ 1.98
MSH2-203ENST00000454849 BLOC1S4Q9NUP1 217 aa27.43■■□□□ 1.98
MSH2-203ENST00000454849 MIOSQ9NXC5 875 aa27.43■■□□□ 1.98
MSH2-203ENST00000454849 CLDND1Q9NY35 253 aa27.43■■□□□ 1.98
MSH2-203ENST00000454849 PARP2Q9UGN5 583 aa27.43■■□□□ 1.98
MSH2-203ENST00000454849 CNTNAP2Q9UHC6 1331 aa27.42■■□□□ 1.98
MSH2-203ENST00000454849 H3BQ06 376 aaPredicted RBP27.42■■□□□ 1.98
MSH2-203ENST00000454849 ACKR2O00590 384 aa27.42■■□□□ 1.98
MSH2-203ENST00000454849 PER2O15055 1255 aa27.42■■□□□ 1.98
MSH2-203ENST00000454849 SLC16A4O15374 487 aa27.42■■□□□ 1.98
MSH2-203ENST00000454849 LINC01565O15544 149 aa27.42■■□□□ 1.98
MSH2-203ENST00000454849 NT5DC1Q5TFE4 455 aa27.42■■□□□ 1.98
MSH2-203ENST00000454849 PLPP4Q5VZY2 271 aa27.42■■□□□ 1.98
MSH2-203ENST00000454849 GPBP1Q86WP2 473 aa27.42■■□□□ 1.98
MSH2-203ENST00000454849 SLC39A11Q8N1S5 342 aa27.42■■□□□ 1.98
MSH2-203ENST00000454849 MRPS27Q92552 414 aaKnown RBP27.42■■□□□ 1.98
MSH2-203ENST00000454849 SYMPKQ92797 1274 aaKnown RBP27.42■■□□□ 1.98
MSH2-203ENST00000454849 DRC1Q96MC2 740 aa27.42■■□□□ 1.98
MSH2-203ENST00000454849 PANK2Q9BZ23 570 aa27.42■■□□□ 1.98
MSH2-203ENST00000454849 KMT5AQ9NQR1 393 aa27.42■■□□□ 1.98
MSH2-203ENST00000454849 TLR9Q9NR96 1032 aa27.42■■□□□ 1.98
MSH2-203ENST00000454849 SRPRBQ9Y5M8 271 aaKnown RBP27.42■■□□□ 1.98
MSH2-203ENST00000454849 XIRP2A4UGR9 3374 aa27.42■■□□□ 1.98
MSH2-203ENST00000454849 ARL5CA6NH57 179 aa27.41■■□□□ 1.98
MSH2-203ENST00000454849 K7ERI5 159 aa27.41■■□□□ 1.98
MSH2-203ENST00000454849 GUCY2CP25092 1073 aa27.41■■□□□ 1.98
MSH2-203ENST00000454849 NRIP1P48552 1158 aa27.41■■□□□ 1.98
MSH2-203ENST00000454849 SLC11A1P49279 550 aa27.41■■□□□ 1.98
MSH2-203ENST00000454849 DMP1Q13316 513 aaPredicted RBP27.41■■□□□ 1.98
MSH2-203ENST00000454849 CSPP1Q1MSJ5 1256 aa27.41■■□□□ 1.98
MSH2-203ENST00000454849 CNNM3Q8NE01 707 aa27.41■■□□□ 1.98
MSH2-203ENST00000454849 BCL7CQ8WUZ0 217 aaPredicted RBP27.41■■□□□ 1.98
MSH2-203ENST00000454849 PRIMPOLQ96LW4 560 aa27.41■■□□□ 1.98
MSH2-203ENST00000454849 DAXXQ9UER7 740 aaPredicted RBP27.41■■□□□ 1.98
MSH2-203ENST00000454849 SPTBN5Q9NRC6 3674 aaKnown RBP27.4■■□□□ 1.98
MSH2-203ENST00000454849 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.4■■□□□ 1.98
MSH2-203ENST00000454849 GALTP07902 379 aa27.4■■□□□ 1.98
MSH2-203ENST00000454849 SCNN1GP51170 649 aa27.4■■□□□ 1.98
MSH2-203ENST00000454849 EFNA5P52803 228 aa27.4■■□□□ 1.98
MSH2-203ENST00000454849 KRT17Q04695 432 aa27.4■■□□□ 1.98
MSH2-203ENST00000454849 SLC39A14Q15043 492 aa27.4■■□□□ 1.98
MSH2-203ENST00000454849 NECAB3Q96P71 396 aaPredicted RBP27.4■■□□□ 1.98
MSH2-203ENST00000454849 FAM193BQ96PV7 902 aaPredicted RBP27.4■■□□□ 1.98
MSH2-203ENST00000454849 PUF60Q9UHX1 559 aaKnown RBP27.4■■□□□ 1.98
MSH2-203ENST00000454849 TCF20Q9UGU0 1960 aaKnown RBP27.39■■□□□ 1.98
MSH2-203ENST00000454849 N4BP3O15049 544 aa27.39■■□□□ 1.98
MSH2-203ENST00000454849 ZSCAN22P10073 491 aaPredicted RBP27.39■■□□□ 1.98
MSH2-203ENST00000454849 BMP1P13497 986 aa27.39■■□□□ 1.98
MSH2-203ENST00000454849 PLCB3Q01970 1234 aa27.39■■□□□ 1.98
MSH2-203ENST00000454849 UBE3AQ05086 875 aa27.39■■□□□ 1.98
MSH2-203ENST00000454849 STK38Q15208 465 aa27.39■■□□□ 1.98
MSH2-203ENST00000454849 CLUL1Q15846 466 aa27.39■■□□□ 1.98
MSH2-203ENST00000454849 TAS1R3Q7RTX0 852 aa27.39■■□□□ 1.98
MSH2-203ENST00000454849 RAD54LQ92698 747 aa27.39■■□□□ 1.98
MSH2-203ENST00000454849 TCF25Q9BQ70 676 aa27.39■■□□□ 1.98
MSH2-203ENST00000454849 CCSER1Q9C0I3 900 aa27.39■■□□□ 1.98
MSH2-203ENST00000454849 CXCL16Q9H2A7 254 aa27.39■■□□□ 1.98
MSH2-203ENST00000454849 ENTPD7Q9NQZ7 604 aa27.39■■□□□ 1.98
MSH2-203ENST00000454849 SNTG2Q9NY99 539 aa27.39■■□□□ 1.98
MSH2-203ENST00000454849 VCANP13611 3396 aa27.39■■□□□ 1.98
MSH2-203ENST00000454849 CA8P35219 290 aa27.38■■□□□ 1.97
MSH2-203ENST00000454849 PPM1AP35813 382 aa27.38■■□□□ 1.97
MSH2-203ENST00000454849 RBM10P98175 930 aaKnown RBP27.38■■□□□ 1.97
MSH2-203ENST00000454849 DLX2Q07687 328 aaPredicted RBP27.38■■□□□ 1.97
MSH2-203ENST00000454849 AAK1Q2M2I8 961 aa27.38■■□□□ 1.97
MSH2-203ENST00000454849 ATF7IP2Q5U623 682 aa27.38■■□□□ 1.97
MSH2-203ENST00000454849 RABGGTAQ92696 567 aa27.38■■□□□ 1.97
MSH2-203ENST00000454849 REEP2Q9BRK0 252 aa27.38■■□□□ 1.97
MSH2-203ENST00000454849 TLE6Q9H808 572 aa27.38■■□□□ 1.97
MSH2-203ENST00000454849 UBN1Q9NPG3 1134 aa27.38■■□□□ 1.97
MSH2-203ENST00000454849 GDAQ9Y2T3 454 aa27.38■■□□□ 1.97
MSH2-203ENST00000454849 HIDE1A8MVS5 230 aa27.37■■□□□ 1.97
MSH2-203ENST00000454849 SLC26A4O43511 780 aa27.37■■□□□ 1.97
MSH2-203ENST00000454849 PLS3P13797 630 aa27.37■■□□□ 1.97
MSH2-203ENST00000454849 NASPP49321 788 aaPredicted RBP27.37■■□□□ 1.97
MSH2-203ENST00000454849 TMC7Q7Z402 723 aa27.37■■□□□ 1.97
MSH2-203ENST00000454849 HACE1Q8IYU2 909 aa27.37■■□□□ 1.97
MSH2-203ENST00000454849 KRI1Q8N9T8 703 aaKnown RBP27.37■■□□□ 1.97
MSH2-203ENST00000454849 ADAMTS19Q8TE59 1207 aa27.37■■□□□ 1.97
MSH2-203ENST00000454849 AUTS2Q8WXX7 1259 aa27.37■■□□□ 1.97
MSH2-203ENST00000454849 PABPC5Q96DU9 382 aaKnown RBP27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms