RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 VN1R3Q9BXE9 311 aa18.22■□□□□ 0.51
NCKIPSD-208ENST00000454134 TRIM6Q9C030 488 aaPredicted RBP18.22■□□□□ 0.51
NCKIPSD-208ENST00000454134 ZBP1Q9H171 429 aa18.22■□□□□ 0.51
NCKIPSD-208ENST00000454134 BHMT2Q9H2M3 363 aa18.22■□□□□ 0.51
NCKIPSD-208ENST00000454134 DDX19AQ9NUU7 478 aaKnown RBP18.22■□□□□ 0.51
NCKIPSD-208ENST00000454134 FSD2A1L4K1 749 aa18.21■□□□□ 0.51
NCKIPSD-208ENST00000454134 ARL5CA6NH57 179 aa18.21■□□□□ 0.51
NCKIPSD-208ENST00000454134 TTLL13PA6NNM8 815 aa18.21■□□□□ 0.51
NCKIPSD-208ENST00000454134 H3BQV1 296 aa18.21■□□□□ 0.51
NCKIPSD-208ENST00000454134 NPTXRO95502 500 aa18.21■□□□□ 0.51
NCKIPSD-208ENST00000454134 CDC25AP30304 524 aa18.21■□□□□ 0.51
NCKIPSD-208ENST00000454134 PDIA5Q14554 519 aa18.21■□□□□ 0.51
NCKIPSD-208ENST00000454134 TMEM184AQ6ZMB5 413 aa18.21■□□□□ 0.51
NCKIPSD-208ENST00000454134 DDX53Q86TM3 631 aaKnown RBP18.21■□□□□ 0.51
NCKIPSD-208ENST00000454134 IGSF22Q8N9C0 903 aa18.21■□□□□ 0.51
NCKIPSD-208ENST00000454134 UBN1Q9NPG3 1134 aa18.21■□□□□ 0.51
NCKIPSD-208ENST00000454134 C11orf16Q9NQ32 467 aa18.21■□□□□ 0.51
NCKIPSD-208ENST00000454134 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.21■□□□□ 0.51
NCKIPSD-208ENST00000454134 MIOSQ9NXC5 875 aa18.21■□□□□ 0.51
NCKIPSD-208ENST00000454134 KANSL3Q9P2N6 904 aa18.21■□□□□ 0.51
NCKIPSD-208ENST00000454134 USP20Q9Y2K6 914 aa18.21■□□□□ 0.51
NCKIPSD-208ENST00000454134 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.2■□□□□ 0.5
NCKIPSD-208ENST00000454134 NRP1O14786 923 aa18.2■□□□□ 0.5
NCKIPSD-208ENST00000454134 CLASP2O75122 1294 aaKnown RBP18.2■□□□□ 0.5
NCKIPSD-208ENST00000454134 ALDH2P05091 517 aa18.2■□□□□ 0.5
NCKIPSD-208ENST00000454134 SRGAP2BP0DMP2 458 aa18.2■□□□□ 0.5
NCKIPSD-208ENST00000454134 LIG1P18858 919 aa18.2■□□□□ 0.5
NCKIPSD-208ENST00000454134 MUTP22033 750 aa18.2■□□□□ 0.5
NCKIPSD-208ENST00000454134 AKAP5P24588 427 aa18.2■□□□□ 0.5
NCKIPSD-208ENST00000454134 MCM2P49736 904 aa18.2■□□□□ 0.5
NCKIPSD-208ENST00000454134 SCNN1GP51170 649 aa18.2■□□□□ 0.5
NCKIPSD-208ENST00000454134 CDCA2Q69YH5 1023 aaPredicted RBP18.2■□□□□ 0.5
NCKIPSD-208ENST00000454134 ANKRD54Q6NXT1 300 aa18.2■□□□□ 0.5
NCKIPSD-208ENST00000454134 SLC27A1Q6PCB7 646 aa18.2■□□□□ 0.5
NCKIPSD-208ENST00000454134 SYCE2Q6PIF2 218 aa18.2■□□□□ 0.5
NCKIPSD-208ENST00000454134 ZBTB8OSQ8IWT0 167 aa18.2■□□□□ 0.5
NCKIPSD-208ENST00000454134 POP1Q99575 1024 aaKnown RBP18.2■□□□□ 0.5
NCKIPSD-208ENST00000454134 LRFN3Q9BTN0 628 aa18.2■□□□□ 0.5
NCKIPSD-208ENST00000454134 KIFC3Q9BVG8 833 aa18.2■□□□□ 0.5
NCKIPSD-208ENST00000454134 RAB34Q9BZG1 259 aa18.2■□□□□ 0.5
NCKIPSD-208ENST00000454134 KLK14Q9P0G3 267 aa18.2■□□□□ 0.5
NCKIPSD-208ENST00000454134 SMC3Q9UQE7 1217 aa18.2■□□□□ 0.5
NCKIPSD-208ENST00000454134 FAN1Q9Y2M0 1017 aa18.2■□□□□ 0.5
NCKIPSD-208ENST00000454134 HCFC2Q9Y5Z7 792 aa18.2■□□□□ 0.5
NCKIPSD-208ENST00000454134 A0A1B0GUA9 196 aa18.19■□□□□ 0.5
NCKIPSD-208ENST00000454134 SSBP05455 408 aaKnown RBP eCLIP18.19■□□□□ 0.5
NCKIPSD-208ENST00000454134 CTSAP10619 480 aa18.19■□□□□ 0.5
NCKIPSD-208ENST00000454134 BMS1Q14692 1282 aaKnown RBP18.19■□□□□ 0.5
NCKIPSD-208ENST00000454134 TMEM31Q5JXX7 168 aa18.19■□□□□ 0.5
NCKIPSD-208ENST00000454134 DTHD1Q6ZMT9 781 aa18.19■□□□□ 0.5
NCKIPSD-208ENST00000454134 PPP4R3CPQ6ZMV5 832 aa18.19■□□□□ 0.5
NCKIPSD-208ENST00000454134 DEPTORQ8TB45 409 aa18.19■□□□□ 0.5
NCKIPSD-208ENST00000454134 TMEM175Q9BSA9 504 aa18.19■□□□□ 0.5
NCKIPSD-208ENST00000454134 S1PR5Q9H228 398 aa18.19■□□□□ 0.5
NCKIPSD-208ENST00000454134 FZD8Q9H461 694 aa18.19■□□□□ 0.5
NCKIPSD-208ENST00000454134 PRMT7Q9NVM4 692 aaPredicted RBP18.19■□□□□ 0.5
NCKIPSD-208ENST00000454134 CDH22Q9UJ99 828 aa18.19■□□□□ 0.5
NCKIPSD-208ENST00000454134 PRG3Q9Y2Y8 225 aaPredicted RBP18.19■□□□□ 0.5
NCKIPSD-208ENST00000454134 CARNS1A5YM72 827 aa18.18■□□□□ 0.5
NCKIPSD-208ENST00000454134 E9PMD0 336 aa18.18■□□□□ 0.5
NCKIPSD-208ENST00000454134 LAD1O00515 517 aa18.18■□□□□ 0.5
NCKIPSD-208ENST00000454134 INPPL1O15357 1258 aa18.18■□□□□ 0.5
NCKIPSD-208ENST00000454134 EDN1P05305 212 aa18.18■□□□□ 0.5
NCKIPSD-208ENST00000454134 PRPHP41219 470 aa18.18■□□□□ 0.5
NCKIPSD-208ENST00000454134 NAMPTP43490 491 aa18.18■□□□□ 0.5
NCKIPSD-208ENST00000454134 OR1G1P47890 313 aa18.18■□□□□ 0.5
NCKIPSD-208ENST00000454134 TMEM132AQ24JP5 1023 aa18.18■□□□□ 0.5
NCKIPSD-208ENST00000454134 RILPL1Q5EBL4 403 aa18.18■□□□□ 0.5
NCKIPSD-208ENST00000454134 KRT79Q5XKE5 535 aa18.18■□□□□ 0.5
NCKIPSD-208ENST00000454134 COLGALT2Q8IYK4 626 aa18.18■□□□□ 0.5
NCKIPSD-208ENST00000454134 HACE1Q8IYU2 909 aa18.18■□□□□ 0.5
NCKIPSD-208ENST00000454134 TMEM87AQ8NBN3 555 aa18.18■□□□□ 0.5
NCKIPSD-208ENST00000454134 SUSD6Q92537 303 aa18.18■□□□□ 0.5
NCKIPSD-208ENST00000454134 CASP10Q92851 521 aa18.18■□□□□ 0.5
NCKIPSD-208ENST00000454134 MMTAG2Q9BU76 263 aaKnown RBP18.18■□□□□ 0.5
NCKIPSD-208ENST00000454134 C2orf40Q9H1Z8 148 aa18.18■□□□□ 0.5
NCKIPSD-208ENST00000454134 MARCH5Q9NX47 278 aa18.18■□□□□ 0.5
NCKIPSD-208ENST00000454134 PARP2Q9UGN5 583 aa18.18■□□□□ 0.5
NCKIPSD-208ENST00000454134 GIT1Q9Y2X7 761 aa18.18■□□□□ 0.5
NCKIPSD-208ENST00000454134 F8W810 466 aa18.17■□□□□ 0.5
NCKIPSD-208ENST00000454134 DCXO43602 365 aa18.17■□□□□ 0.5
NCKIPSD-208ENST00000454134 PRKCBP05771 671 aa18.17■□□□□ 0.5
NCKIPSD-208ENST00000454134 ALADP13716 330 aa18.17■□□□□ 0.5
NCKIPSD-208ENST00000454134 ATP2C1P98194 919 aaPredicted RBP18.17■□□□□ 0.5
NCKIPSD-208ENST00000454134 DSC1Q08554 894 aa18.17■□□□□ 0.5
NCKIPSD-208ENST00000454134 PRPF4BQ13523 1007 aaKnown RBP18.17■□□□□ 0.5
NCKIPSD-208ENST00000454134 PPP2R5AQ15172 486 aa18.17■□□□□ 0.5
NCKIPSD-208ENST00000454134 ZRSR1Q15695 479 aaKnown RBP18.17■□□□□ 0.5
NCKIPSD-208ENST00000454134 MAPK6Q16659 721 aa18.17■□□□□ 0.5
NCKIPSD-208ENST00000454134 FAM187BQ17R55 369 aa18.17■□□□□ 0.5
NCKIPSD-208ENST00000454134 KCNK18Q7Z418 384 aa18.17■□□□□ 0.5
NCKIPSD-208ENST00000454134 RNF135Q8IUD6 432 aa18.17■□□□□ 0.5
NCKIPSD-208ENST00000454134 GSTCDQ8NEC7 633 aa18.17■□□□□ 0.5
NCKIPSD-208ENST00000454134 RPGRIP1Q96KN7 1286 aa18.17■□□□□ 0.5
NCKIPSD-208ENST00000454134 PRIMPOLQ96LW4 560 aa18.17■□□□□ 0.5
NCKIPSD-208ENST00000454134 CCDC113Q9H0I3 377 aa18.17■□□□□ 0.5
NCKIPSD-208ENST00000454134 PDZD7Q9H5P4 517 aa18.17■□□□□ 0.5
NCKIPSD-208ENST00000454134 MUTYHQ9UIF7 546 aa18.17■□□□□ 0.5
NCKIPSD-208ENST00000454134 DNM3Q9UQ16 869 aa18.17■□□□□ 0.5
NCKIPSD-208ENST00000454134 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms