RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 NPTX2P47972 431 aa16.15■□□□□ 0.18
VPS16-205ENST00000453689 NDUFA8P51970 172 aa16.15■□□□□ 0.18
VPS16-205ENST00000453689 DHX8Q14562 1220 aaKnown RBP16.15■□□□□ 0.18
VPS16-205ENST00000453689 MCM6Q14566 821 aa16.15■□□□□ 0.18
VPS16-205ENST00000453689 E2F4Q16254 413 aa16.15■□□□□ 0.18
VPS16-205ENST00000453689 MAPK6Q16659 721 aa16.15■□□□□ 0.18
VPS16-205ENST00000453689 AGMOQ6ZNB7 445 aa16.15■□□□□ 0.18
VPS16-205ENST00000453689 CDR2LQ86X02 465 aaPredicted RBP16.15■□□□□ 0.18
VPS16-205ENST00000453689 IQUBQ8NA54 791 aa16.15■□□□□ 0.18
VPS16-205ENST00000453689 SMG8Q8ND04 991 aaKnown RBP16.15■□□□□ 0.18
VPS16-205ENST00000453689 PRUNE2Q8WUY3 3088 aa16.15■□□□□ 0.18
VPS16-205ENST00000453689 LARP4BQ92615 738 aaKnown RBP16.15■□□□□ 0.18
VPS16-205ENST00000453689 P2RX5Q93086 422 aa16.15■□□□□ 0.18
VPS16-205ENST00000453689 DHX58Q96C10 678 aa16.15■□□□□ 0.18
VPS16-205ENST00000453689 PGBD4Q96DM1 585 aa16.15■□□□□ 0.18
VPS16-205ENST00000453689 PANK2Q9BZ23 570 aa16.15■□□□□ 0.18
VPS16-205ENST00000453689 CUEDC2Q9H467 287 aa16.15■□□□□ 0.18
VPS16-205ENST00000453689 KCND2Q9NZV8 630 aa16.15■□□□□ 0.18
VPS16-205ENST00000453689 CNTNAP2Q9UHC6 1331 aa16.15■□□□□ 0.18
VPS16-205ENST00000453689 A0A1B0GUA9 196 aa16.14■□□□□ 0.17
VPS16-205ENST00000453689 CCDC169A6NNP5 214 aa16.14■□□□□ 0.17
VPS16-205ENST00000453689 GRM6O15303 877 aa16.14■□□□□ 0.17
VPS16-205ENST00000453689 POLR2DO15514 142 aaKnown RBP16.14■□□□□ 0.17
VPS16-205ENST00000453689 EDN1P05305 212 aa16.14■□□□□ 0.17
VPS16-205ENST00000453689 LIG1P18858 919 aa16.14■□□□□ 0.17
VPS16-205ENST00000453689 SYKP43405 635 aa16.14■□□□□ 0.17
VPS16-205ENST00000453689 EFNA5P52803 228 aa16.14■□□□□ 0.17
VPS16-205ENST00000453689 DMP1Q13316 513 aaPredicted RBP16.14■□□□□ 0.17
VPS16-205ENST00000453689 NAALADL2Q58DX5 795 aa16.14■□□□□ 0.17
VPS16-205ENST00000453689 SLC27A1Q6PCB7 646 aa16.14■□□□□ 0.17
VPS16-205ENST00000453689 GPBP1Q86WP2 473 aa16.14■□□□□ 0.17
VPS16-205ENST00000453689 LRRC43Q8N309 656 aa16.14■□□□□ 0.17
VPS16-205ENST00000453689 COLGALT1Q8NBJ5 622 aa16.14■□□□□ 0.17
VPS16-205ENST00000453689 CNNM3Q8NE01 707 aa16.14■□□□□ 0.17
VPS16-205ENST00000453689 MRPL38Q96DV4 380 aaKnown RBP16.14■□□□□ 0.17
VPS16-205ENST00000453689 C17orf75Q9HAS0 396 aa16.14■□□□□ 0.17
VPS16-205ENST00000453689 MAGEF1Q9HAY2 307 aa16.14■□□□□ 0.17
VPS16-205ENST00000453689 USP20Q9Y2K6 914 aa16.14■□□□□ 0.17
VPS16-205ENST00000453689 IPPQ9Y573 584 aa16.14■□□□□ 0.17
VPS16-205ENST00000453689 ACKR2O00590 384 aa16.13■□□□□ 0.17
VPS16-205ENST00000453689 OFD1O75665 1012 aa16.13■□□□□ 0.17
VPS16-205ENST00000453689 NPTXRO95502 500 aa16.13■□□□□ 0.17
VPS16-205ENST00000453689 ITGB1P05556 798 aa16.13■□□□□ 0.17
VPS16-205ENST00000453689 LAG3P18627 525 aa16.13■□□□□ 0.17
VPS16-205ENST00000453689 CACNB1Q02641 598 aaPredicted RBP16.13■□□□□ 0.17
VPS16-205ENST00000453689 PRPF4BQ13523 1007 aaKnown RBP16.13■□□□□ 0.17
VPS16-205ENST00000453689 GLB1LQ6UWU2 654 aa16.13■□□□□ 0.17
VPS16-205ENST00000453689 KLHL23Q8NBE8 558 aa16.13■□□□□ 0.17
VPS16-205ENST00000453689 TRIM6Q9C030 488 aaPredicted RBP16.13■□□□□ 0.17
VPS16-205ENST00000453689 NXF3Q9H4D5 531 aaKnown RBP16.13■□□□□ 0.17
VPS16-205ENST00000453689 ALG13Q9NP73 1137 aaKnown RBP16.13■□□□□ 0.17
VPS16-205ENST00000453689 KMT5AQ9NQR1 393 aa16.13■□□□□ 0.17
VPS16-205ENST00000453689 AAASQ9NRG9 546 aa16.13■□□□□ 0.17
VPS16-205ENST00000453689 LMBRD1Q9NUN5 540 aa16.13■□□□□ 0.17
VPS16-205ENST00000453689 ARHGAP28Q9P2N2 729 aa16.13■□□□□ 0.17
VPS16-205ENST00000453689 USP25Q9UHP3 1055 aa16.13■□□□□ 0.17
VPS16-205ENST00000453689 PLAGL2Q9UPG8 496 aa16.13■□□□□ 0.17
VPS16-205ENST00000453689 INPP5FQ9Y2H2 1132 aa16.13■□□□□ 0.17
VPS16-205ENST00000453689 HES2Q9Y543 173 aa16.13■□□□□ 0.17
VPS16-205ENST00000453689 PCDHB12Q9Y5F1 795 aa16.13■□□□□ 0.17
VPS16-205ENST00000453689 PHLPP2Q6ZVD8 1323 aa16.13■□□□□ 0.17
VPS16-205ENST00000453689 ANK1P16157 1881 aa16.12■□□□□ 0.17
VPS16-205ENST00000453689 K7ERI5 159 aa16.12■□□□□ 0.17
VPS16-205ENST00000453689 N4BP3O15049 544 aa16.12■□□□□ 0.17
VPS16-205ENST00000453689 SLC16A4O15374 487 aa16.12■□□□□ 0.17
VPS16-205ENST00000453689 ITGA4P13612 1032 aa16.12■□□□□ 0.17
VPS16-205ENST00000453689 PLS3P13797 630 aa16.12■□□□□ 0.17
VPS16-205ENST00000453689 FAM160A1Q05DH4 1040 aa16.12■□□□□ 0.17
VPS16-205ENST00000453689 PTPROQ16827 1216 aa16.12■□□□□ 0.17
VPS16-205ENST00000453689 NOMO2Q5JPE7 1267 aa16.12■□□□□ 0.17
VPS16-205ENST00000453689 SV2BQ7L1I2 683 aa16.12■□□□□ 0.17
VPS16-205ENST00000453689 TAS1R3Q7RTX0 852 aa16.12■□□□□ 0.17
VPS16-205ENST00000453689 CEP57L1Q8IYX8 460 aa16.12■□□□□ 0.17
VPS16-205ENST00000453689 RSPH1Q8WYR4 309 aa16.12■□□□□ 0.17
VPS16-205ENST00000453689 REEP2Q9BRK0 252 aa16.12■□□□□ 0.17
VPS16-205ENST00000453689 MRPL9Q9BYD2 267 aaKnown RBP16.12■□□□□ 0.17
VPS16-205ENST00000453689 LMAN2LQ9H0V9 348 aa16.12■□□□□ 0.17
VPS16-205ENST00000453689 TNMDQ9H2S6 317 aa16.12■□□□□ 0.17
VPS16-205ENST00000453689 PDZD7Q9H5P4 517 aa16.12■□□□□ 0.17
VPS16-205ENST00000453689 TMEM134Q9H6X4 195 aa16.12■□□□□ 0.17
VPS16-205ENST00000453689 RSAD1Q9HA92 442 aa16.12■□□□□ 0.17
VPS16-205ENST00000453689 ODF2LQ9ULJ1 636 aa16.12■□□□□ 0.17
VPS16-205ENST00000453689 TCF20Q9UGU0 1960 aaKnown RBP16.11■□□□□ 0.17
VPS16-205ENST00000453689 ACTN4O43707 911 aaKnown RBP16.11■□□□□ 0.17
VPS16-205ENST00000453689 DNAJB1P25685 340 aa16.11■□□□□ 0.17
VPS16-205ENST00000453689 PBX3P40426 434 aa16.11■□□□□ 0.17
VPS16-205ENST00000453689 AFF1P51825 1210 aaKnown RBP16.11■□□□□ 0.17
VPS16-205ENST00000453689 TMEM132AQ24JP5 1023 aa16.11■□□□□ 0.17
VPS16-205ENST00000453689 NT5DC1Q5TFE4 455 aa16.11■□□□□ 0.17
VPS16-205ENST00000453689 EEF1DP3Q658K8 133 aa16.11■□□□□ 0.17
VPS16-205ENST00000453689 KCNT2Q6UVM3 1135 aa16.11■□□□□ 0.17
VPS16-205ENST00000453689 FMR1NBQ8N0W7 255 aaPredicted RBP16.11■□□□□ 0.17
VPS16-205ENST00000453689 ENGASEQ8NFI3 743 aa16.11■□□□□ 0.17
VPS16-205ENST00000453689 SPPL3Q8TCT6 385 aa16.11■□□□□ 0.17
VPS16-205ENST00000453689 SPIRE2Q8WWL2 714 aa16.11■□□□□ 0.17
VPS16-205ENST00000453689 ZNF558Q96NG5 402 aa16.11■□□□□ 0.17
VPS16-205ENST00000453689 NTPCRQ9BSD7 190 aaKnown RBP16.11■□□□□ 0.17
VPS16-205ENST00000453689 APOL6Q9BWW8 343 aa16.11■□□□□ 0.17
VPS16-205ENST00000453689 RNF39Q9H2S5 420 aa16.11■□□□□ 0.17
VPS16-205ENST00000453689 PRDM6Q9NQX0 595 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms