RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 GGPS1O95749 300 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 CCNE2O96020 404 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 GH1P01241 217 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 ASGR1P07306 291 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 CTAGE8P0CG41 777 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 MAPTP10636 758 aaKnown RBP11.67□□□□□ -0.54
PKP4-206ENST00000452162 UCHL3P15374 230 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 CBX1P83916 185 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 ASIC2Q16515 512 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 HS2ST1Q7LGA3 356 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 CTAGE6Q86UF2 777 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 SLC9A9Q8IVB4 645 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 CTAGE4Q8IX94 777 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 MSANTD4Q8NCY6 345 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 TRIM58Q8NG06 486 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 AFG1LQ8WV93 481 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 GPRASP2Q96D09 838 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 GBP3Q9H0R5 595 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 FHOD1Q9Y613 1164 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 TACC1O75410 805 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 JAK3P52333 1124 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 ACLYP53396 1101 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 KRT76Q01546 638 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 CELF3Q5SZQ8 465 aaKnown RBP11.67□□□□□ -0.54
PKP4-206ENST00000452162 TMCO3Q6UWJ1 677 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 GBP6Q6ZN66 633 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 DHX37Q8IY37 1157 aaKnown RBP11.67□□□□□ -0.54
PKP4-206ENST00000452162 C4orf19Q8IY42 314 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 GOLGA5Q8TBA6 731 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 PHF24Q9UPV7 400 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 TELO2Q9Y4R8 837 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 SAMM50Q9Y512 469 aa11.67□□□□□ -0.54
PKP4-206ENST00000452162 A6NJR5 290 aa11.66□□□□□ -0.54
PKP4-206ENST00000452162 MOCS3O95396 460 aa11.66□□□□□ -0.54
PKP4-206ENST00000452162 KCNA2P16389 499 aa11.66□□□□□ -0.54
PKP4-206ENST00000452162 YWHABP31946 246 aaKnown RBP11.66□□□□□ -0.54
PKP4-206ENST00000452162 SFNP31947 248 aa11.66□□□□□ -0.54
PKP4-206ENST00000452162 MYBPC2Q14324 1141 aa11.66□□□□□ -0.54
PKP4-206ENST00000452162 TCERG1LQ5VWI1 586 aa11.66□□□□□ -0.54
PKP4-206ENST00000452162 CC2D1AQ6P1N0 951 aaPredicted RBP11.66□□□□□ -0.54
PKP4-206ENST00000452162 CXCL17Q6UXB2 119 aa11.66□□□□□ -0.54
PKP4-206ENST00000452162 CYFIP1Q7L576 1253 aa11.66□□□□□ -0.54
PKP4-206ENST00000452162 IRF2BP2Q7Z5L9 587 aa11.66□□□□□ -0.54
PKP4-206ENST00000452162 TXLNBQ8N3L3 684 aa11.66□□□□□ -0.54
PKP4-206ENST00000452162 PCSK9Q8NBP7 692 aaKnown RBP11.66□□□□□ -0.54
PKP4-206ENST00000452162 TSEN34Q9BSV6 310 aaKnown RBP11.66□□□□□ -0.54
PKP4-206ENST00000452162 SALL4Q9UJQ4 1053 aa11.66□□□□□ -0.54
PKP4-206ENST00000452162 AJAP1Q9UKB5 411 aaPredicted RBP11.66□□□□□ -0.54
PKP4-206ENST00000452162 RAB21Q9UL25 225 aa11.66□□□□□ -0.54
PKP4-206ENST00000452162 SCN10AQ9Y5Y9 1956 aa11.66□□□□□ -0.54
PKP4-206ENST00000452162 A0A1W2PQ45 241 aaPredicted RBP11.65□□□□□ -0.54
PKP4-206ENST00000452162 A0A1W2PQY0 241 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 WDR64B1ANS9 1081 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 K7ENM7 598 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 BACH1O14867 736 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 SRGAP2O75044 1071 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 PLS3P13797 630 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 ATN1P54259 1190 aaPredicted RBP11.65□□□□□ -0.54
PKP4-206ENST00000452162 JAM2P57087 298 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 PSMC5P62195 406 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 KLHL30Q0D2K2 578 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 ALCAMQ13740 583 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 LAMC2Q13753 1193 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 BMS1Q14692 1282 aaKnown RBP11.65□□□□□ -0.54
PKP4-206ENST00000452162 SLC18A3Q16572 532 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 HSDL1Q3SXM5 330 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 NOA1Q8NC60 698 aaKnown RBP11.65□□□□□ -0.54
PKP4-206ENST00000452162 RDM1Q8NG50 284 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 TMEM174Q8WUU8 243 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 EMID1Q96A84 441 aaPredicted RBP11.65□□□□□ -0.54
PKP4-206ENST00000452162 SENP7Q9BQF6 1050 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 TIPINQ9BVW5 301 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 GCNT4Q9P109 453 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 LARSQ9P2J5 1176 aaKnown RBP11.65□□□□□ -0.54
PKP4-206ENST00000452162 JRKLQ9Y4A0 524 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 A0A087X0T9 212 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 MOXD2PA6NHM9 499 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 SEC31AO94979 1220 aaKnown RBP11.65□□□□□ -0.54
PKP4-206ENST00000452162 FAM228BP0C875 321 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 PNMA6AP0CW24 399 aaPredicted RBP11.65□□□□□ -0.54
PKP4-206ENST00000452162 CPT1AP50416 773 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 CYP2J2P51589 502 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 NEDD9Q14511 834 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 MAEAQ7L5Y9 396 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 CDHR1Q96JP9 859 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 SPATA33Q96N06 139 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 MMS19Q96T76 1030 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 ST6GALNAC4Q9H4F1 302 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 ANKEF1Q9NU02 776 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 SNX12Q9UMY4 172 aa11.65□□□□□ -0.54
PKP4-206ENST00000452162 WDR81Q562E7 1941 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 CCDC151A5D8V7 595 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 TMEM150BA6NC51 233 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 MAFGO15525 162 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 MMP3P08254 477 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 MYL3P08590 195 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 PRKCIP41743 596 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 FMO5P49326 533 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 SP4Q02446 784 aa11.64□□□□□ -0.55
PKP4-206ENST00000452162 ARID5AQ03989 594 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms