RNA–Protein interactions for RNA: ENST00000451653.5

SEC22C-211, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best)

Gene SEC22C, Length 5,955 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-211ENST00000451653 SMARCA1P28370 1054 aa8.79□□□□□ -1
SEC22C-211ENST00000451653 PPP3CCP48454 512 aa8.79□□□□□ -1
SEC22C-211ENST00000451653 AP1ARQ63HQ0 302 aa8.79□□□□□ -1
SEC22C-211ENST00000451653 DDIASQ8IXT1 998 aa8.79□□□□□ -1
SEC22C-211ENST00000451653 CYTH2Q99418 400 aa8.79□□□□□ -1
SEC22C-211ENST00000451653 NDEL1Q9GZM8 345 aa8.79□□□□□ -1
SEC22C-211ENST00000451653 STN1Q9H668 368 aaKnown RBP8.79□□□□□ -1
SEC22C-211ENST00000451653 BCL2L12Q9HB09 334 aa8.79□□□□□ -1
SEC22C-211ENST00000451653 STAP1Q9ULZ2 295 aa8.79□□□□□ -1
SEC22C-211ENST00000451653 TARSL2A2RTX5 802 aaKnown RBP8.79□□□□□ -1
SEC22C-211ENST00000451653 COPEO14579 308 aa8.79□□□□□ -1
SEC22C-211ENST00000451653 GH2P01242 217 aa8.79□□□□□ -1
SEC22C-211ENST00000451653 HIST1H2AGP0C0S8 130 aaPredicted RBP8.79□□□□□ -1
SEC22C-211ENST00000451653 SLFN14P0C7P3 912 aa8.79□□□□□ -1
SEC22C-211ENST00000451653 HIST1H2ADP20671 130 aa8.79□□□□□ -1
SEC22C-211ENST00000451653 AKT1P31749 480 aa8.79□□□□□ -1
SEC22C-211ENST00000451653 TMPRSS15P98073 1019 aa8.79□□□□□ -1
SEC22C-211ENST00000451653 NME3Q13232 169 aa8.79□□□□□ -1
SEC22C-211ENST00000451653 WDR75Q8IWA0 830 aaKnown RBP8.79□□□□□ -1
SEC22C-211ENST00000451653 LINC00116Q8NCU8 138 aa8.79□□□□□ -1
SEC22C-211ENST00000451653 HIST1H2AHQ96KK5 128 aa8.79□□□□□ -1
SEC22C-211ENST00000451653 HIST1H2AJQ99878 128 aa8.79□□□□□ -1
SEC22C-211ENST00000451653 TMEM47Q9BQJ4 181 aa8.79□□□□□ -1
SEC22C-211ENST00000451653 H2AFJQ9BTM1 129 aa8.79□□□□□ -1
SEC22C-211ENST00000451653 SPATA16Q9BXB7 569 aa8.79□□□□□ -1
SEC22C-211ENST00000451653 FBXO40Q9UH90 709 aa8.79□□□□□ -1
SEC22C-211ENST00000451653 APOBEC2Q9Y235 224 aaKnown RBP8.79□□□□□ -1
SEC22C-211ENST00000451653 ZNF609O15014 1411 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 GOLGA8MH3BSY2 632 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 PGRMC1O00264 195 aaKnown RBP8.78□□□□□ -1
SEC22C-211ENST00000451653 KDM1AO60341 852 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 ECE2O60344 883 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 TJP3O95049 919 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 RPSAP08865 295 aaKnown RBP8.78□□□□□ -1
SEC22C-211ENST00000451653 ATP1A3P13637 1013 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 NCALDP61601 193 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 MDM2Q00987 491 aaPredicted RBP8.78□□□□□ -1
SEC22C-211ENST00000451653 ALCAMQ13740 583 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 RABL6Q3YEC7 729 aaPredicted RBP8.78□□□□□ -1
SEC22C-211ENST00000451653 FAM133BQ5BKY9 247 aaKnown RBP8.78□□□□□ -1
SEC22C-211ENST00000451653 RASSF3Q86WH2 238 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 GJD4Q96KN9 370 aaPredicted RBP8.78□□□□□ -1
SEC22C-211ENST00000451653 PPP1R13BQ96KQ4 1090 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 HOXC10Q9NYD6 342 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 TRIM33Q9UPN9 1127 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 ADGRB1O14514 1584 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 RNF103-CHMP3A0A140T963 221 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 A0A1B0GW55 424 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 PJA2O43164 708 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 DDHD2O94830 711 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 DUX4L2P0CJ85 424 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 DUX4L3P0CJ86 424 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 DUX4L4P0CJ87 422 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 DUX4L5P0CJ88 424 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 DUX4L6P0CJ89 424 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 DUX4L7P0CJ90 424 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 EPB42P16452 691 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 TRPC1P48995 793 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 CACNB2Q08289 660 aaPredicted RBP8.78□□□□□ -1
SEC22C-211ENST00000451653 PDIA6Q15084 440 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 MAPK6Q16659 721 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 ZNF568Q3ZCX4 644 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 ZNF394Q53GI3 561 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 TTLL6Q8N841 843 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 ZNF713Q8N859 430 aaPredicted RBP8.78□□□□□ -1
SEC22C-211ENST00000451653 PLEKHA8Q96JA3 519 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 DUX4Q9UBX2 424 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 ARHGAP26Q9UNA1 814 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 CAB39Q9Y376 341 aaPredicted RBP8.78□□□□□ -1
SEC22C-211ENST00000451653 HEY1Q9Y5J3 304 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 EPN1Q9Y6I3 576 aaPredicted RBP8.78□□□□□ -1
SEC22C-211ENST00000451653 NRXN1Q9ULB1 1477 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 ABCC12Q96J65 1359 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 CLDN3O15551 220 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 CCT5P48643 541 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 GPC3P51654 580 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 HDAC4P56524 1084 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 HPCAP84074 193 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 ITSN1Q15811 1721 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 ZNF699Q32M78 642 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 ZNF658Q5TYW1 1059 aaPredicted RBP8.78□□□□□ -1
SEC22C-211ENST00000451653 FAM133AQ8N9E0 248 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 OR6P1Q8NGX9 317 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 HES6Q96HZ4 224 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 ECT2Q9H8V3 914 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 ACTR5Q9H9F9 607 aaPredicted RBP8.78□□□□□ -1
SEC22C-211ENST00000451653 ATP6V0A4Q9HBG4 840 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 HPS4Q9NQG7 708 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 TMEM260Q9NX78 707 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 PIM2Q9P1W9 311 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 KIAA1210Q9ULL0 1709 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 FAM47E-STBD1D6RA91 191 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 SPAG7O75391 227 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 TTLL4Q14679 1199 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 KRT39Q6A163 491 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 NT5DC4Q86YG4 428 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 RNF135Q8IUD6 432 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 ST13P4Q8IZP2 240 aaPredicted RBP8.78□□□□□ -1
SEC22C-211ENST00000451653 KRT78Q8N1N4 520 aa8.78□□□□□ -1
SEC22C-211ENST00000451653 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms