RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 DTHD1Q6ZMT9 781 aa16.91■□□□□ 0.3
CHD3-205ENST00000449744 DDX53Q86TM3 631 aaKnown RBP16.91■□□□□ 0.3
CHD3-205ENST00000449744 TMEM173Q86WV6 379 aaPredicted RBP16.91■□□□□ 0.3
CHD3-205ENST00000449744 TMEM175Q9BSA9 504 aa16.91■□□□□ 0.3
CHD3-205ENST00000449744 APOL6Q9BWW8 343 aa16.91■□□□□ 0.3
CHD3-205ENST00000449744 C2orf40Q9H1Z8 148 aa16.91■□□□□ 0.3
CHD3-205ENST00000449744 BHMT2Q9H2M3 363 aa16.91■□□□□ 0.3
CHD3-205ENST00000449744 KIAA1024Q9UPX6 916 aa16.91■□□□□ 0.3
CHD3-205ENST00000449744 FAN1Q9Y2M0 1017 aa16.91■□□□□ 0.3
CHD3-205ENST00000449744 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.91■□□□□ 0.3
CHD3-205ENST00000449744 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.9■□□□□ 0.3
CHD3-205ENST00000449744 C2orf71A6NGG8 1288 aa16.9■□□□□ 0.3
CHD3-205ENST00000449744 DDHD2O94830 711 aa16.9■□□□□ 0.3
CHD3-205ENST00000449744 PLA2G5P39877 138 aa16.9■□□□□ 0.3
CHD3-205ENST00000449744 MLH1P40692 756 aa16.9■□□□□ 0.3
CHD3-205ENST00000449744 PRPHP41219 470 aa16.9■□□□□ 0.3
CHD3-205ENST00000449744 AFF1P51825 1210 aaKnown RBP16.9■□□□□ 0.3
CHD3-205ENST00000449744 GIT2Q14161 759 aa16.9■□□□□ 0.3
CHD3-205ENST00000449744 ANKRD54Q6NXT1 300 aa16.9■□□□□ 0.3
CHD3-205ENST00000449744 TMEM184AQ6ZMB5 413 aa16.9■□□□□ 0.3
CHD3-205ENST00000449744 IGSF22Q8N9C0 903 aa16.9■□□□□ 0.3
CHD3-205ENST00000449744 VN1R2Q8NFZ6 395 aa16.9■□□□□ 0.3
CHD3-205ENST00000449744 DEPTORQ8TB45 409 aa16.9■□□□□ 0.3
CHD3-205ENST00000449744 CASP10Q92851 521 aa16.9■□□□□ 0.3
CHD3-205ENST00000449744 IFT74Q96LB3 600 aa16.9■□□□□ 0.3
CHD3-205ENST00000449744 PRIMPOLQ96LW4 560 aa16.9■□□□□ 0.3
CHD3-205ENST00000449744 GAD1Q99259 594 aa16.9■□□□□ 0.3
CHD3-205ENST00000449744 LRFN3Q9BTN0 628 aa16.9■□□□□ 0.3
CHD3-205ENST00000449744 ZBP1Q9H171 429 aa16.9■□□□□ 0.3
CHD3-205ENST00000449744 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.9■□□□□ 0.3
CHD3-205ENST00000449744 DDX19AQ9NUU7 478 aaKnown RBP16.9■□□□□ 0.3
CHD3-205ENST00000449744 STK39Q9UEW8 545 aa16.9■□□□□ 0.3
CHD3-205ENST00000449744 HCN4Q9Y3Q4 1203 aa16.9■□□□□ 0.3
CHD3-205ENST00000449744 USP15Q9Y4E8 981 aaPredicted RBP16.9■□□□□ 0.3
CHD3-205ENST00000449744 HES2Q9Y543 173 aa16.9■□□□□ 0.3
CHD3-205ENST00000449744 XIRP2A4UGR9 3374 aa16.89■□□□□ 0.3
CHD3-205ENST00000449744 A0A1B0GUA9 196 aa16.89■□□□□ 0.29
CHD3-205ENST00000449744 C19orf67A6NJJ6 358 aa16.89■□□□□ 0.29
CHD3-205ENST00000449744 NR1I2O75469 434 aa16.89■□□□□ 0.29
CHD3-205ENST00000449744 NPTXRO95502 500 aa16.89■□□□□ 0.29
CHD3-205ENST00000449744 CTSAP10619 480 aa16.89■□□□□ 0.29
CHD3-205ENST00000449744 NAMPTP43490 491 aa16.89■□□□□ 0.29
CHD3-205ENST00000449744 ECM1Q16610 540 aa16.89■□□□□ 0.29
CHD3-205ENST00000449744 CDCA2Q69YH5 1023 aaPredicted RBP16.89■□□□□ 0.29
CHD3-205ENST00000449744 PPP4R3CPQ6ZMV5 832 aa16.89■□□□□ 0.29
CHD3-205ENST00000449744 CDR2LQ86X02 465 aaPredicted RBP16.89■□□□□ 0.29
CHD3-205ENST00000449744 RNF39Q9H2S5 420 aa16.89■□□□□ 0.29
CHD3-205ENST00000449744 NXF3Q9H4D5 531 aaKnown RBP16.89■□□□□ 0.29
CHD3-205ENST00000449744 PARP2Q9UGN5 583 aa16.89■□□□□ 0.29
CHD3-205ENST00000449744 DNM3Q9UQ16 869 aa16.89■□□□□ 0.29
CHD3-205ENST00000449744 GIT1Q9Y2X7 761 aa16.89■□□□□ 0.29
CHD3-205ENST00000449744 ARL5CA6NH57 179 aa16.88■□□□□ 0.29
CHD3-205ENST00000449744 NRP1O14786 923 aa16.88■□□□□ 0.29
CHD3-205ENST00000449744 B4GALT3O60512 393 aa16.88■□□□□ 0.29
CHD3-205ENST00000449744 CLASP2O75122 1294 aaKnown RBP16.88■□□□□ 0.29
CHD3-205ENST00000449744 HOXB8P17481 243 aaPredicted RBP16.88■□□□□ 0.29
CHD3-205ENST00000449744 LIG1P18858 919 aa16.88■□□□□ 0.29
CHD3-205ENST00000449744 OR1G1P47890 313 aa16.88■□□□□ 0.29
CHD3-205ENST00000449744 PRPF4BQ13523 1007 aaKnown RBP16.88■□□□□ 0.29
CHD3-205ENST00000449744 KCNC3Q14003 757 aa16.88■□□□□ 0.29
CHD3-205ENST00000449744 MAPK6Q16659 721 aa16.88■□□□□ 0.29
CHD3-205ENST00000449744 LARP1BQ659C4 914 aaKnown RBP16.88■□□□□ 0.29
CHD3-205ENST00000449744 BCL7CQ8WUZ0 217 aaPredicted RBP16.88■□□□□ 0.29
CHD3-205ENST00000449744 KIFAP3Q92845 792 aa16.88■□□□□ 0.29
CHD3-205ENST00000449744 APOL5Q9BWW9 433 aa16.88■□□□□ 0.29
CHD3-205ENST00000449744 FZD8Q9H461 694 aa16.88■□□□□ 0.29
CHD3-205ENST00000449744 PRG3Q9Y2Y8 225 aaPredicted RBP16.88■□□□□ 0.29
CHD3-205ENST00000449744 HCFC2Q9Y5Z7 792 aa16.88■□□□□ 0.29
CHD3-205ENST00000449744 PP2D1A8MPX8 630 aa16.87■□□□□ 0.29
CHD3-205ENST00000449744 E9PMD0 336 aa16.87■□□□□ 0.29
CHD3-205ENST00000449744 N4BP3O15049 544 aa16.87■□□□□ 0.29
CHD3-205ENST00000449744 INPPL1O15357 1258 aa16.87■□□□□ 0.29
CHD3-205ENST00000449744 DCXO43602 365 aa16.87■□□□□ 0.29
CHD3-205ENST00000449744 PRKCBP05771 671 aa16.87■□□□□ 0.29
CHD3-205ENST00000449744 AKAP5P24588 427 aa16.87■□□□□ 0.29
CHD3-205ENST00000449744 SCNN1GP51170 649 aa16.87■□□□□ 0.29
CHD3-205ENST00000449744 ZRSR1Q15695 479 aaKnown RBP16.87■□□□□ 0.29
CHD3-205ENST00000449744 FAM187BQ17R55 369 aa16.87■□□□□ 0.29
CHD3-205ENST00000449744 TPRNQ4KMQ1 711 aa16.87■□□□□ 0.29
CHD3-205ENST00000449744 AUTS2Q8WXX7 1259 aa16.87■□□□□ 0.29
CHD3-205ENST00000449744 BSNDQ8WZ55 320 aa16.87■□□□□ 0.29
CHD3-205ENST00000449744 ZFP42Q96MM3 310 aa16.87■□□□□ 0.29
CHD3-205ENST00000449744 RPS6KC1Q96S38 1066 aa16.87■□□□□ 0.29
CHD3-205ENST00000449744 ADPGKQ9BRR6 497 aa16.87■□□□□ 0.29
CHD3-205ENST00000449744 PHF7Q9BWX1 381 aaPredicted RBP16.87■□□□□ 0.29
CHD3-205ENST00000449744 IRAK3Q9Y616 596 aa16.87■□□□□ 0.29
CHD3-205ENST00000449744 FAM86C2PA6NEL3 165 aa16.86■□□□□ 0.29
CHD3-205ENST00000449744 ACKR2O00590 384 aa16.86■□□□□ 0.29
CHD3-205ENST00000449744 GPR37L1O60883 481 aa16.86■□□□□ 0.29
CHD3-205ENST00000449744 SSBP05455 408 aaKnown RBP eCLIP16.86■□□□□ 0.29
CHD3-205ENST00000449744 CDC25AP30304 524 aa16.86■□□□□ 0.29
CHD3-205ENST00000449744 ATP2C1P98194 919 aaPredicted RBP16.86■□□□□ 0.29
CHD3-205ENST00000449744 IL17AQ16552 155 aa16.86■□□□□ 0.29
CHD3-205ENST00000449744 CES5AQ6NT32 575 aa16.86■□□□□ 0.29
CHD3-205ENST00000449744 SYCE2Q6PIF2 218 aa16.86■□□□□ 0.29
CHD3-205ENST00000449744 COLGALT2Q8IYK4 626 aa16.86■□□□□ 0.29
CHD3-205ENST00000449744 EMILIN2Q9BXX0 1053 aa16.86■□□□□ 0.29
CHD3-205ENST00000449744 S1PR5Q9H228 398 aa16.86■□□□□ 0.29
CHD3-205ENST00000449744 POLD4Q9HCU8 107 aa16.86■□□□□ 0.29
CHD3-205ENST00000449744 MIOSQ9NXC5 875 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms