RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 TBCKQ8TEA7 893 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 COA7Q96BR5 231 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 ETNK1Q9HBU6 452 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 VAT1LQ9HCJ6 419 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 CYP39A1Q9NYL5 469 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 NYAP2Q9P242 653 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 DIS3Q9Y2L1 958 aaKnown RBP14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 GMEB1Q9Y692 573 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 HGSO14964 777 aaPredicted RBP14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 CACNA2D1P54289 1103 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 USP46P62068 366 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 RAPGEF1Q13905 1077 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 SEPT14Q6ZU15 432 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 PTPRN2Q92932 1015 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 FAM136AQ96C01 138 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 GMLQ99445 158 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 FAM192AQ9GZU8 254 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 H0Y3Z8 333 aa14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 PEX11AO75192 247 aa14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 RPL13P26373 211 aaKnown RBP14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 DHX9Q08211 1270 aaKnown RBP14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 GPATCH4Q5T3I0 446 aaKnown RBP14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 RBBP8NLQ8NC74 664 aaPredicted RBP14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 ASAP3Q8TDY4 903 aa14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 SNX29Q8TEQ0 813 aa14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 ARHGAP20Q9P2F6 1191 aa14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 TMCC1O94876 653 aa14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 MYBP10242 640 aa14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 ZNF24P17028 368 aa14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 PABPC4Q13310 644 aaKnown RBP eCLIP14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 RCN2Q14257 317 aa14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 RRP1BQ14684 758 aaKnown RBP14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 NAB2Q15742 525 aa14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 CARD9Q9H257 536 aa14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 TAOK3Q9H2K8 898 aa14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 CTNNAL1Q9UBT7 734 aa14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 ATF5Q9Y2D1 282 aaPredicted RBP14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 F8VZ95 297 aa14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 TECP42680 631 aa14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 MMP13P45452 471 aa14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 STK4Q13043 487 aa14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 FAM26FQ5R3K3 315 aa14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 LSM14BQ9BX40 385 aaKnown RBP14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 UTP11Q9Y3A2 253 aaKnown RBP14.44□□□□□ -0.1
SYNGAP1-204ENST00000449372 hCG_2014768A0A024R1R8 64 aa14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 TLDC2A0PJX2 215 aa14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 PGRMC1O00264 195 aaKnown RBP14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 FTCDO95954 541 aa14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 ADCY7P51828 1080 aa14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 PMS1P54277 932 aaKnown RBP14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 RNASELQ05823 741 aaKnown RBP14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 ERMNQ8TAM6 284 aa14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 SLITRK6Q9H5Y7 841 aa14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 GPCPD1Q9NPB8 672 aa14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 FAM196BA6NMK8 535 aa14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 G3V3G9 751 aa14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 ENTPD3O75355 529 aa14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 TXKP42681 527 aa14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 SLC18A3Q16572 532 aa14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 DCAF8Q5TAQ9 597 aa14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 TMC3Q7Z5M5 1100 aa14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 GPIHBP1Q8IV16 184 aa14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 FITM2Q8N6M3 262 aa14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 USP38Q8NB14 1042 aa14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 PRMT6Q96LA8 375 aaPredicted RBP14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 STK32BQ9NY57 414 aa14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 SIK3Q9Y2K2 1263 aa14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 EEF2P13639 858 aaKnown RBP14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 FXR2P51116 673 aaKnown RBP eCLIP14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 TCP10Q12799 353 aa14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 TMEM132AQ24JP5 1023 aa14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 DDX27Q96GQ7 796 aaKnown RBP14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 RXFP1Q9HBX9 757 aa14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 METTL14Q9HCE5 456 aaKnown RBP14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 LRCH1Q9Y2L9 728 aa14.43□□□□□ -0.1
SYNGAP1-204ENST00000449372 RBAK-RBAKDNI3L0D1 243 aa14.42□□□□□ -0.1
SYNGAP1-204ENST00000449372 ZBTB5O15062 677 aa14.42□□□□□ -0.1
SYNGAP1-204ENST00000449372 MIIPQ5JXC2 388 aa14.42□□□□□ -0.1
SYNGAP1-204ENST00000449372 ARHGAP18Q8N392 663 aa14.42□□□□□ -0.1
SYNGAP1-204ENST00000449372 RANBP17Q9H2T7 1088 aaKnown RBP14.42□□□□□ -0.1
SYNGAP1-204ENST00000449372 PACSIN2Q9UNF0 486 aaPredicted RBP14.42□□□□□ -0.1
SYNGAP1-204ENST00000449372 BTNL10A8MVZ5 291 aa14.42□□□□□ -0.1
SYNGAP1-204ENST00000449372 USP17L10C9JJH3 530 aa14.42□□□□□ -0.1
SYNGAP1-204ENST00000449372 NVLO15381 856 aaKnown RBP14.42□□□□□ -0.1
SYNGAP1-204ENST00000449372 SLC37A4O43826 429 aa14.42□□□□□ -0.1
SYNGAP1-204ENST00000449372 GFPT2O94808 682 aa14.42□□□□□ -0.1
SYNGAP1-204ENST00000449372 CNPY1Q3B7I2 92 aa14.42□□□□□ -0.1
SYNGAP1-204ENST00000449372 UTP4Q969X6 686 aaKnown RBP14.42□□□□□ -0.1
SYNGAP1-204ENST00000449372 INPP4AQ96PE3 977 aaPredicted RBP14.42□□□□□ -0.1
SYNGAP1-204ENST00000449372 ADAM7Q9H2U9 754 aa14.42□□□□□ -0.1
SYNGAP1-204ENST00000449372 FER1L6Q2WGJ9 1857 aa14.42□□□□□ -0.1
SYNGAP1-204ENST00000449372 HNRNPRO43390 633 aaKnown RBP14.42□□□□□ -0.1
SYNGAP1-204ENST00000449372 PALMO75781 387 aa14.42□□□□□ -0.1
SYNGAP1-204ENST00000449372 GJA8P48165 433 aa14.42□□□□□ -0.1
SYNGAP1-204ENST00000449372 EHHADHQ08426 723 aa14.42□□□□□ -0.1
SYNGAP1-204ENST00000449372 KCTD19Q17RG1 926 aaPredicted RBP14.42□□□□□ -0.1
SYNGAP1-204ENST00000449372 GMCL1P1Q8NEA9 526 aa14.42□□□□□ -0.1
SYNGAP1-204ENST00000449372 SUPT20HQ8NEM7 779 aa14.42□□□□□ -0.1
SYNGAP1-204ENST00000449372 RAD54LQ92698 747 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms