RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 MCM3APO60318 1980 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 ZNF236Q9UL36 1845 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 HNRNPDLO14979 420 aaKnown RBP11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 GFPT2O94808 682 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 ARIH2O95376 493 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 GTF2H1P32780 548 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 PRKCIP41743 596 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 MAGEA1P43355 309 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 LIG4P49917 911 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 SNRNP35Q16560 246 aaKnown RBP11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 HGSNATQ68CP4 663 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 SLFN12LQ6IEE8 588 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 DPY19L2P1Q6NXN4 242 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 MNS1Q8NEH6 495 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 ATP8B4Q8TF62 1192 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 POMGNT1Q8WZA1 660 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 SLC39A7Q92504 469 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 FBXL18Q96ME1 805 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 CEP89Q96ST8 783 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 SIX2Q9NPC8 291 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 PCDHA13Q9Y5I0 950 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 FHOD1Q9Y613 1164 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 RBM47A0AV96 593 aaKnown RBP11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 K7ERI5 159 aa11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 HBP1O60381 514 aa11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 LDHAP00338 332 aaKnown RBP11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 GH1P01241 217 aa11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 PIGRP01833 764 aa11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 PLEKP08567 350 aaPredicted RBP11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 ACTN1P12814 892 aa11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 EFNA5P52803 228 aa11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 JAM2P57087 298 aa11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 TUBB4BP68371 445 aa11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 MXD4Q14582 209 aaPredicted RBP11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 SLC18A3Q16572 532 aa11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 TUSC1Q2TAM9 212 aa11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 ASTE1Q2TB18 679 aaPredicted RBP11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 MAMDC4Q6UXC1 1216 aa11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 DPP9Q86TI2 863 aa11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 GPD1LQ8N335 351 aa11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 SLC35F6Q8N357 371 aa11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 MSL3Q8N5Y2 521 aaKnown RBP11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 SECISBP2LQ93073 1101 aaKnown RBP11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 ZDHHC16Q969W1 377 aa11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 KIFC3Q9BVG8 833 aa11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 STK33Q9BYT3 514 aa11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 INTS2Q9H0H0 1204 aaKnown RBP11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 R3HDMLQ9H3Y0 253 aa11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 APEX2Q9UBZ4 518 aa11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 ATP8B3O60423 1300 aa11.48□□□□□ -0.57
VIPAS39-203ENST00000448935 ANO9A1A5B4 782 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 MANSC4A6NHS7 340 aaPredicted RBP11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 SLC15A5A6NIM6 579 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 LRRIQ4A6NIV6 560 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 ANKRD63C9JTQ0 380 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 PJA2O43164 708 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 TLR2O60603 784 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 TACC1O75410 805 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 TRIM49P0CI25 452 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 TRIM49CP0CI26 452 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 GLRA2P23416 452 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 MXI1P50539 228 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 SOX10P56693 466 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 HUNKP57058 714 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 CYP27A1Q02318 531 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 GRB14Q14449 540 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 HSDL1Q3SXM5 330 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 CBWD6Q4V339 395 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 CBWD3Q5JTY5 395 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 CBWD5Q5RIA9 395 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 GPR142Q7Z601 462 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 MTERF4Q7Z6M4 381 aaKnown RBP11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 PLEKHH3Q7Z736 793 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 TRIM58Q8NG06 486 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 TMEM143Q96AN5 459 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 FAM81BQ96LP2 452 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 ALS2CR12Q96Q35 445 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 IRX2Q9BZI1 471 aaPredicted RBP11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 C2orf40Q9H1Z8 148 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 PRM3Q9NNZ6 103 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 ERAP1Q9NZ08 941 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 ZNF215Q9UL58 517 aaPredicted RBP11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 USP20Q9Y2K6 914 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 MRFAP1Q9Y605 127 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 STYXL1Q9Y6J8 313 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 ADGRA3Q8IWK6 1321 aa11.47□□□□□ -0.57
VIPAS39-203ENST00000448935 ZNF233A6NK53 670 aa11.46□□□□□ -0.57
VIPAS39-203ENST00000448935 TISP43B9A030 160 aa11.46□□□□□ -0.57
VIPAS39-203ENST00000448935 ASAP2O43150 1006 aa11.46□□□□□ -0.57
VIPAS39-203ENST00000448935 ADCY3O60266 1144 aa11.46□□□□□ -0.57
VIPAS39-203ENST00000448935 ADSSP30520 456 aa11.46□□□□□ -0.57
VIPAS39-203ENST00000448935 PRSS12P56730 875 aa11.46□□□□□ -0.57
VIPAS39-203ENST00000448935 IRF5Q13568 498 aa11.46□□□□□ -0.57
VIPAS39-203ENST00000448935 TFDP1Q14186 410 aa11.46□□□□□ -0.57
VIPAS39-203ENST00000448935 KRT39Q6A163 491 aa11.46□□□□□ -0.57
VIPAS39-203ENST00000448935 IQCEQ6IPM2 695 aa11.46□□□□□ -0.57
VIPAS39-203ENST00000448935 IRF2BP2Q7Z5L9 587 aa11.46□□□□□ -0.57
VIPAS39-203ENST00000448935 ZBTB8OSQ8IWT0 167 aa11.46□□□□□ -0.57
VIPAS39-203ENST00000448935 RNF10Q8N5U6 811 aaKnown RBP11.46□□□□□ -0.57
VIPAS39-203ENST00000448935 CEP112Q8N8E3 955 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms