RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 POMCP01189 267 aa14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 EDN1P05305 212 aa14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 PRKCBP05771 671 aa14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 GALTP07902 379 aa14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 PLA2G4BP0C869 781 aa14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 GUCY2CP25092 1073 aa14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 PPM1AP35813 382 aa14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 LTBRP36941 435 aa14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 NPTX2P47972 431 aa14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 EFNA5P52803 228 aa14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 RAD51AP2Q09MP3 1159 aa14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 CTC1Q2NKJ3 1217 aa14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 EP400NLQ6ZTU2 488 aa14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 RBM23Q86U06 439 aaKnown RBP14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 URGCPQ8TCY9 931 aa14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 LRRC15Q8TF66 581 aa14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 CALML4Q96GE6 196 aa14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 GAD1Q99259 594 aa14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 APOL6Q9BWW8 343 aa14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 TRIM6Q9C030 488 aaPredicted RBP14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 GBP3Q9H0R5 595 aa14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 NXF3Q9H4D5 531 aaKnown RBP14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 UBN1Q9NPG3 1134 aa14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 MIOSQ9NXC5 875 aa14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 CLDND1Q9NY35 253 aa14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 KANSL3Q9P2N6 904 aa14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 FBXO2Q9UK22 296 aaPredicted RBP14.06□□□□□ -0.16
PRPF40A-203ENST00000448428 NPHP3-ACAD11A0A0J9YXS1 232 aa14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 ARL5CA6NH57 179 aa14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 K7ERI5 159 aa14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 FSCN2O14926 492 aa14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 INPPL1O15357 1258 aa14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 LINC01565O15544 149 aa14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 HSP90AA1P07900 732 aaKnown RBP14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 AKAP5P24588 427 aa14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 DLX2Q07687 328 aaPredicted RBP14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 ADAM15Q13444 863 aa14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 KARSQ15046 597 aaKnown RBP14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 LEXMQ3ZCV2 418 aa14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 ARSHQ5FYA8 562 aa14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 SPECC1Q5M775 1068 aa14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 NT5DC1Q5TFE4 455 aa14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 EEF1DP3Q658K8 133 aa14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 PDE12Q6L8Q7 609 aaKnown RBP14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 USP49Q70CQ1 688 aa14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 TMEM173Q86WV6 379 aaPredicted RBP14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 ADAMTS19Q8TE59 1207 aa14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 EPSTI1Q96J88 318 aa14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 DRC1Q96MC2 740 aa14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 ZFP42Q96MM3 310 aa14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 USP28Q96RU2 1077 aa14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 NTPCRQ9BSD7 190 aaKnown RBP14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 TIPINQ9BVW5 301 aa14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 CCSER1Q9C0I3 900 aa14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 PDZD7Q9H5P4 517 aa14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 TLE6Q9H808 572 aa14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 BLOC1S4Q9NUP1 217 aa14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 GIT1Q9Y2X7 761 aa14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 SRPRBQ9Y5M8 271 aaKnown RBP14.05□□□□□ -0.16
PRPF40A-203ENST00000448428 TRIP11Q15643 1979 aa14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 H3BQ06 376 aaPredicted RBP14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 N4BP3O15049 544 aa14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 PER2O15055 1255 aa14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 ALDH2P05091 517 aa14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 PLCG1P19174 1290 aa14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 MLH1P40692 756 aa14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 NRIP1P48552 1158 aa14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 SLC11A1P49279 550 aa14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 DMP1Q13316 513 aaPredicted RBP14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 DHX8Q14562 1220 aaKnown RBP14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 SLC39A14Q15043 492 aa14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 TMEM132AQ24JP5 1023 aa14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 HACE1Q8IYU2 909 aa14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 SPRYD3Q8NCJ5 442 aa14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 GSTCDQ8NEC7 633 aa14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 BCL7CQ8WUZ0 217 aaPredicted RBP14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 PPP2R3CQ969Q6 453 aa14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 TMEM169Q96HH4 297 aa14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 IGSF21Q96ID5 467 aa14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 CLIC6Q96NY7 704 aa14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 NECAB3Q96P71 396 aaPredicted RBP14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 FAM193BQ96PV7 902 aaPredicted RBP14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 TCF25Q9BQ70 676 aa14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 TMEM134Q9H6X4 195 aa14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 C17orf75Q9HAS0 396 aa14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 KMT5AQ9NQR1 393 aa14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 KCND2Q9NZV8 630 aa14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 KLK14Q9P0G3 267 aa14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 RBM19Q9Y4C8 960 aaKnown RBP14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 A0A0C4DFX4 3053 aa14.04□□□□□ -0.16
PRPF40A-203ENST00000448428 HIDE1A8MVS5 230 aa14.03□□□□□ -0.16
PRPF40A-203ENST00000448428 SLC16A4O15374 487 aa14.03□□□□□ -0.16
PRPF40A-203ENST00000448428 PLS3P13797 630 aa14.03□□□□□ -0.16
PRPF40A-203ENST00000448428 SCNN1GP51170 649 aa14.03□□□□□ -0.16
PRPF40A-203ENST00000448428 MCM6Q14566 821 aa14.03□□□□□ -0.16
PRPF40A-203ENST00000448428 FOXD4L5Q5VV16 416 aaPredicted RBP14.03□□□□□ -0.16
PRPF40A-203ENST00000448428 PLPP4Q5VZY2 271 aa14.03□□□□□ -0.16
PRPF40A-203ENST00000448428 TAS1R3Q7RTX0 852 aa14.03□□□□□ -0.16
PRPF40A-203ENST00000448428 TMC7Q7Z402 723 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms