RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 ADGRA3Q8IWK6 1321 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 DENND3A2RUS2 1198 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 RBAK-RBAKDNI3L0D1 243 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 INO80B-WBP1J3KQ70 363 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 ACKR2O00590 384 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 RPS6KA5O75582 802 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 MYBP10242 640 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 CSF2RAP15509 400 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 FGFR4P22455 802 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 CD52P31358 61 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 ABCD1P33897 745 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 CLCN1P35523 988 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 CASP5P51878 434 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 STK4Q13043 487 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 MAPK6Q16659 721 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 FAM187BQ17R55 369 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 ZC2HC1CQ53FD0 456 aaPredicted RBP8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 PLEKHG4Q58EX7 1191 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 FAM26FQ5R3K3 315 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 CCDC183Q5T5S1 534 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 EPM2AIP1Q7L775 607 aaPredicted RBP8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 TAS1R3Q7RTX0 852 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 DEFB128Q7Z7B8 93 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 FAM228AQ86W67 206 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 PARP9Q8IXQ6 854 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 RPUSD2Q8IZ73 545 aaKnown RBP8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 VWCEQ96DN2 955 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 FGFBP2Q9BYJ0 223 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 CCDC113Q9H0I3 377 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 ERVK-5Q9HDB9 667 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 RMND1Q9NWS8 449 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 MAN1B1Q9UKM7 699 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 ZMYND8Q9ULU4 1186 aaPredicted RBP8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 PADI3Q9ULW8 664 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 TBX20Q9UMR3 447 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 EVPLQ92817 2033 aa8.3□□□□□ -1.08
AC004540.1-206ENST00000448056 PHLPP2Q6ZVD8 1323 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 TNRC18O15417 2968 aaPredicted RBP8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 ARID2Q68CP9 1835 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 K7ENM7 598 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 GCNT3O95395 438 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 PRKCBP05771 671 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 BMP6P22004 513 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 SFPQP23246 707 aaKnown RBP eCLIP8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 HOXA11P31270 313 aaPredicted RBP8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 HOXD13P35453 343 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 FPGSQ05932 587 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 NCBP1Q09161 790 aaKnown RBP8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 KCNA1Q09470 495 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 NFX1Q12986 1120 aaKnown RBP8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 STRN3Q13033 797 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 PAK2Q13177 524 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 PRPF4BQ13523 1007 aaKnown RBP8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 ALCAMQ13740 583 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 MORC3Q14149 939 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 ZNF658Q5TYW1 1059 aaPredicted RBP8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 ISM2Q6H9L7 571 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 CAVIN1Q6NZI2 390 aaKnown RBP8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 RBM43Q6ZSC3 357 aaKnown RBP8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 FAM43BQ6ZT52 329 aaPredicted RBP8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 STXBP4Q6ZWJ1 553 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 C16orf59Q7L2K0 433 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 CATSPER4Q7RTX7 472 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 GLIS3Q8NEA6 775 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 DBF4BQ8NFT6 615 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 ZNF507Q8TCN5 953 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 SCFD1Q8WVM8 642 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 SEPT8Q92599 483 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 PRIMPOLQ96LW4 560 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 ACCSQ96QU6 501 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 LBHD1Q9BQE6 289 aaPredicted RBP8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 IFIH1Q9BYX4 1025 aaKnown RBP8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 GTPBP4Q9BZE4 634 aaKnown RBP8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 TMX1Q9H3N1 280 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 IL23AQ9NPF7 189 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 CHST12Q9NRB3 414 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 PRMT7Q9NVM4 692 aaPredicted RBP8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 TMEM63CQ9P1W3 806 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 USP20Q9Y2K6 914 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 LOXHD1Q8IVV2 1947 aa8.29□□□□□ -1.08
AC004540.1-206ENST00000448056 A0A1B0GUA9 196 aa8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 BIN1O00499 593 aa8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 ENPP3O14638 875 aa8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 EIF3DO15371 548 aaKnown RBP eCLIP8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 B4GALT5O43286 388 aa8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 TSPAN1O60635 241 aa8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 ERLIN2O94905 339 aa8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 PRPF6O94906 941 aaKnown RBP8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 LETM1O95202 739 aaPredicted RBP8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 PFKMP08237 780 aa8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 ACRP10323 421 aa8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 ARF4P18085 180 aaPredicted RBP8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 AXLP30530 894 aa8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 PPIGQ13427 754 aaKnown RBP eCLIP8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 DSC3Q14574 896 aa8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 TCTN1Q2MV58 587 aa8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 L1TD1Q5T7N2 865 aaKnown RBP8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 RTN4RL1Q86UN2 441 aaPredicted RBP8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 TRIML1Q8N9V2 468 aa8.28□□□□□ -1.08
AC004540.1-206ENST00000448056 KIAA0895Q8NCT3 520 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms