RNA–Protein interactions for RNA: ENST00000447419.6

PTX4-203, Transcript of pentraxin 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTX4, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-203ENST00000447419 FAM187BQ17R55 369 aa22.58■■□□□ 1.21
PTX4-203ENST00000447419 GLB1LQ6UWU2 654 aa22.58■■□□□ 1.21
PTX4-203ENST00000447419 KLHL23Q8NBE8 558 aa22.58■■□□□ 1.21
PTX4-203ENST00000447419 DDX12PQ92771 950 aa22.58■■□□□ 1.21
PTX4-203ENST00000447419 PGBD4Q96DM1 585 aa22.58■■□□□ 1.21
PTX4-203ENST00000447419 PRIMPOLQ96LW4 560 aa22.58■■□□□ 1.21
PTX4-203ENST00000447419 ZFP42Q96MM3 310 aa22.58■■□□□ 1.21
PTX4-203ENST00000447419 TARS2Q9BW92 718 aaKnown RBP22.58■■□□□ 1.21
PTX4-203ENST00000447419 RSAD1Q9HA92 442 aa22.58■■□□□ 1.21
PTX4-203ENST00000447419 COL4A4P53420 1690 aaPredicted RBP22.58■■□□□ 1.21
PTX4-203ENST00000447419 TRANK1O15050 2925 aa22.58■■□□□ 1.2
PTX4-203ENST00000447419 REV3LO60673 3130 aa22.58■■□□□ 1.2
PTX4-203ENST00000447419 PHLPP2Q6ZVD8 1323 aa22.57■■□□□ 1.2
PTX4-203ENST00000447419 NT5C1B-RDH14C9J2C7 533 aa22.57■■□□□ 1.2
PTX4-203ENST00000447419 H3BNC9 293 aa22.57■■□□□ 1.2
PTX4-203ENST00000447419 POLR2DO15514 142 aaKnown RBP22.57■■□□□ 1.2
PTX4-203ENST00000447419 GTPBP6O43824 516 aaPredicted RBP22.57■■□□□ 1.2
PTX4-203ENST00000447419 HARSP12081 509 aaKnown RBP22.57■■□□□ 1.2
PTX4-203ENST00000447419 MLH1P40692 756 aa22.57■■□□□ 1.2
PTX4-203ENST00000447419 ATF7IP2Q5U623 682 aa22.57■■□□□ 1.2
PTX4-203ENST00000447419 FAM43BQ6ZT52 329 aaPredicted RBP22.57■■□□□ 1.2
PTX4-203ENST00000447419 MRPL10Q7Z7H8 261 aaKnown RBP22.57■■□□□ 1.2
PTX4-203ENST00000447419 ZBTB33Q86T24 672 aa22.57■■□□□ 1.2
PTX4-203ENST00000447419 LRRC43Q8N309 656 aa22.57■■□□□ 1.2
PTX4-203ENST00000447419 TMEM161BQ8NDZ6 487 aa22.57■■□□□ 1.2
PTX4-203ENST00000447419 SAMD11Q96NU1 681 aa22.57■■□□□ 1.2
PTX4-203ENST00000447419 GAD1Q99259 594 aa22.57■■□□□ 1.2
PTX4-203ENST00000447419 TBC1D7Q9P0N9 293 aa22.57■■□□□ 1.2
PTX4-203ENST00000447419 PARP2Q9UGN5 583 aa22.57■■□□□ 1.2
PTX4-203ENST00000447419 ODF2LQ9ULJ1 636 aa22.57■■□□□ 1.2
PTX4-203ENST00000447419 B4GALT3O60512 393 aa22.57■■□□□ 1.2
PTX4-203ENST00000447419 NMT1P30419 496 aaKnown RBP22.57■■□□□ 1.2
PTX4-203ENST00000447419 SMTNP53814 917 aa22.57■■□□□ 1.2
PTX4-203ENST00000447419 NOMO2Q5JPE7 1267 aa22.57■■□□□ 1.2
PTX4-203ENST00000447419 RESP18Q5W5W9 173 aa22.57■■□□□ 1.2
PTX4-203ENST00000447419 COLGALT1Q8NBJ5 622 aa22.57■■□□□ 1.2
PTX4-203ENST00000447419 CCDC51Q96ER9 411 aa22.57■■□□□ 1.2
PTX4-203ENST00000447419 CXCL16Q9H2A7 254 aa22.57■■□□□ 1.2
PTX4-203ENST00000447419 C17orf75Q9HAS0 396 aa22.57■■□□□ 1.2
PTX4-203ENST00000447419 PARVGQ9HBI0 331 aa22.57■■□□□ 1.2
PTX4-203ENST00000447419 PRDM6Q9NQX0 595 aa22.57■■□□□ 1.2
PTX4-203ENST00000447419 TBC1D13Q9NVG8 400 aa22.57■■□□□ 1.2
PTX4-203ENST00000447419 LARSQ9P2J5 1176 aaKnown RBP22.57■■□□□ 1.2
PTX4-203ENST00000447419 K7ENM7 598 aa22.56■■□□□ 1.2
PTX4-203ENST00000447419 N4BP3O15049 544 aa22.56■■□□□ 1.2
PTX4-203ENST00000447419 ZC3H11AO75152 810 aaKnown RBP eCLIP22.56■■□□□ 1.2
PTX4-203ENST00000447419 ITGB1P05556 798 aa22.56■■□□□ 1.2
PTX4-203ENST00000447419 MAPTP10636 758 aaKnown RBP22.56■■□□□ 1.2
PTX4-203ENST00000447419 IDEP14735 1019 aa22.56■■□□□ 1.2
PTX4-203ENST00000447419 CASP1P29466 404 aa22.56■■□□□ 1.2
PTX4-203ENST00000447419 RNASELQ05823 741 aaKnown RBP22.56■■□□□ 1.2
PTX4-203ENST00000447419 E2F4Q16254 413 aa22.56■■□□□ 1.2
PTX4-203ENST00000447419 SFR1Q86XK3 245 aa22.56■■□□□ 1.2
PTX4-203ENST00000447419 ZNF280BQ86YH2 543 aa22.56■■□□□ 1.2
PTX4-203ENST00000447419 THNSL1Q8IYQ7 743 aa22.56■■□□□ 1.2
PTX4-203ENST00000447419 SPIRE2Q8WWL2 714 aa22.56■■□□□ 1.2
PTX4-203ENST00000447419 ZBTB45Q96K62 511 aaPredicted RBP22.56■■□□□ 1.2
PTX4-203ENST00000447419 C11orf84Q9BUA3 381 aaPredicted RBP22.56■■□□□ 1.2
PTX4-203ENST00000447419 SNTG2Q9NY99 539 aa22.56■■□□□ 1.2
PTX4-203ENST00000447419 GDAQ9Y2T3 454 aa22.56■■□□□ 1.2
PTX4-203ENST00000447419 ATP6V1DQ9Y5K8 247 aa22.56■■□□□ 1.2
PTX4-203ENST00000447419 A0A1B0GVL5 298 aa22.55■■□□□ 1.2
PTX4-203ENST00000447419 TRAK2O60296 914 aa22.55■■□□□ 1.2
PTX4-203ENST00000447419 DNAJB1P25685 340 aa22.55■■□□□ 1.2
PTX4-203ENST00000447419 ANP32AP39687 249 aaKnown RBP22.55■■□□□ 1.2
PTX4-203ENST00000447419 OSTNP61366 133 aa22.55■■□□□ 1.2
PTX4-203ENST00000447419 NUCB2P80303 420 aa22.55■■□□□ 1.2
PTX4-203ENST00000447419 HAUS6Q7Z4H7 955 aa22.55■■□□□ 1.2
PTX4-203ENST00000447419 ACO2Q99798 780 aaKnown RBP22.55■■□□□ 1.2
PTX4-203ENST00000447419 NTPCRQ9BSD7 190 aaKnown RBP22.55■■□□□ 1.2
PTX4-203ENST00000447419 TMEM134Q9H6X4 195 aa22.55■■□□□ 1.2
PTX4-203ENST00000447419 MIOSQ9NXC5 875 aa22.55■■□□□ 1.2
PTX4-203ENST00000447419 FAM13BQ9NYF5 915 aa22.55■■□□□ 1.2
PTX4-203ENST00000447419 DNAJB4Q9UDY4 337 aa22.55■■□□□ 1.2
PTX4-203ENST00000447419 PLAGL2Q9UPG8 496 aa22.55■■□□□ 1.2
PTX4-203ENST00000447419 RWDD3Q9Y3V2 267 aa22.55■■□□□ 1.2
PTX4-203ENST00000447419 RBM19Q9Y4C8 960 aaKnown RBP22.55■■□□□ 1.2
PTX4-203ENST00000447419 PCDHGC5Q9Y5F6 944 aa22.55■■□□□ 1.2
PTX4-203ENST00000447419 ARL5CA6NH57 179 aa22.54■■□□□ 1.2
PTX4-203ENST00000447419 C5orf67F2Z3F1 127 aa22.54■■□□□ 1.2
PTX4-203ENST00000447419 SCNN1GP51170 649 aa22.54■■□□□ 1.2
PTX4-203ENST00000447419 ZNF131P52739 623 aa22.54■■□□□ 1.2
PTX4-203ENST00000447419 NCKAP1LP55160 1127 aa22.54■■□□□ 1.2
PTX4-203ENST00000447419 STRN3Q13033 797 aa22.54■■□□□ 1.2
PTX4-203ENST00000447419 SKIV2LQ15477 1246 aaKnown RBP22.54■■□□□ 1.2
PTX4-203ENST00000447419 ZC2HC1CQ53FD0 456 aaPredicted RBP22.54■■□□□ 1.2
PTX4-203ENST00000447419 KCNT2Q6UVM3 1135 aa22.54■■□□□ 1.2
PTX4-203ENST00000447419 FAM178BQ8IXR5 827 aa22.54■■□□□ 1.2
PTX4-203ENST00000447419 GRAMD1CQ8IYS0 662 aa22.54■■□□□ 1.2
PTX4-203ENST00000447419 CEP120Q8N960 986 aa22.54■■□□□ 1.2
PTX4-203ENST00000447419 DNAJC19Q96DA6 116 aa22.54■■□□□ 1.2
PTX4-203ENST00000447419 ADPGKQ9BRR6 497 aa22.54■■□□□ 1.2
PTX4-203ENST00000447419 MRPL4Q9BYD3 311 aaKnown RBP22.54■■□□□ 1.2
PTX4-203ENST00000447419 IKZF4Q9H2S9 585 aa22.54■■□□□ 1.2
PTX4-203ENST00000447419 ANKFY1Q9P2R3 1169 aa22.54■■□□□ 1.2
PTX4-203ENST00000447419 PCDHB12Q9Y5F1 795 aa22.54■■□□□ 1.2
PTX4-203ENST00000447419 FNDC1Q4ZHG4 1894 aaPredicted RBP22.54■■□□□ 1.2
PTX4-203ENST00000447419 DDHD2O94830 711 aa22.53■■□□□ 1.2
PTX4-203ENST00000447419 ZNF568Q3ZCX4 644 aa22.53■■□□□ 1.2
PTX4-203ENST00000447419 SEZ6Q53EL9 994 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms