RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 MFSD5Q6N075 450 aa20.54■□□□□ 0.88
SDCBP-204ENST00000447182 ARHGEF19Q8IW93 802 aa20.54■□□□□ 0.88
SDCBP-204ENST00000447182 C12orf56Q8IXR9 622 aa20.54■□□□□ 0.88
SDCBP-204ENST00000447182 RPUSD2Q8IZ73 545 aaKnown RBP20.54■□□□□ 0.88
SDCBP-204ENST00000447182 ART4Q93070 314 aa20.54■□□□□ 0.88
SDCBP-204ENST00000447182 TAOK3Q9H2K8 898 aa20.54■□□□□ 0.88
SDCBP-204ENST00000447182 PCDHAC2Q9Y5I4 1007 aa20.54■□□□□ 0.88
SDCBP-204ENST00000447182 MGRN1O60291 552 aa20.54■□□□□ 0.88
SDCBP-204ENST00000447182 ALCAMQ13740 583 aa20.54■□□□□ 0.88
SDCBP-204ENST00000447182 CEP55Q53EZ4 464 aa20.54■□□□□ 0.88
SDCBP-204ENST00000447182 DAW1Q8N136 415 aa20.54■□□□□ 0.88
SDCBP-204ENST00000447182 BANK1Q8NDB2 785 aa20.54■□□□□ 0.88
SDCBP-204ENST00000447182 UNC45AQ9H3U1 944 aa20.54■□□□□ 0.88
SDCBP-204ENST00000447182 HIP1RO75146 1068 aa20.53■□□□□ 0.88
SDCBP-204ENST00000447182 POLR2MP0CAP2 368 aa20.53■□□□□ 0.88
SDCBP-204ENST00000447182 MAPTP10636 758 aaKnown RBP20.53■□□□□ 0.88
SDCBP-204ENST00000447182 COILP38432 576 aaPredicted RBP20.53■□□□□ 0.88
SDCBP-204ENST00000447182 VAMP7P51809 220 aa20.53■□□□□ 0.88
SDCBP-204ENST00000447182 DLG4P78352 724 aa20.53■□□□□ 0.88
SDCBP-204ENST00000447182 NBPF9Q3BBW0 867 aa20.53■□□□□ 0.88
SDCBP-204ENST00000447182 FAM228AQ86W67 206 aa20.53■□□□□ 0.88
SDCBP-204ENST00000447182 C12orf50Q8NA57 414 aaPredicted RBP20.53■□□□□ 0.88
SDCBP-204ENST00000447182 RDH13Q8NBN7 331 aa20.53■□□□□ 0.88
SDCBP-204ENST00000447182 ROPN1BQ9BZX4 212 aaPredicted RBP20.53■□□□□ 0.88
SDCBP-204ENST00000447182 TMEM206Q9H813 350 aa20.53■□□□□ 0.88
SDCBP-204ENST00000447182 ROPN1Q9HAT0 212 aaPredicted RBP20.53■□□□□ 0.88
SDCBP-204ENST00000447182 MTUS1Q9ULD2 1270 aa20.53■□□□□ 0.88
SDCBP-204ENST00000447182 SLC12A4Q9UP95 1085 aa20.53■□□□□ 0.88
SDCBP-204ENST00000447182 ATRNL1Q5VV63 1379 aa20.53■□□□□ 0.88
SDCBP-204ENST00000447182 PMM2O15305 246 aa20.53■□□□□ 0.88
SDCBP-204ENST00000447182 CFBP00751 764 aa20.53■□□□□ 0.88
SDCBP-204ENST00000447182 PYGMP11217 842 aa20.53■□□□□ 0.88
SDCBP-204ENST00000447182 STAT2P52630 851 aa20.53■□□□□ 0.88
SDCBP-204ENST00000447182 JAG1P78504 1218 aa20.53■□□□□ 0.88
SDCBP-204ENST00000447182 PPP3CAQ08209 521 aa20.53■□□□□ 0.88
SDCBP-204ENST00000447182 ZNF568Q3ZCX4 644 aa20.53■□□□□ 0.88
SDCBP-204ENST00000447182 SLC13A5Q86YT5 568 aaPredicted RBP20.53■□□□□ 0.88
SDCBP-204ENST00000447182 KIAA0825Q8IV33 1275 aa20.53■□□□□ 0.88
SDCBP-204ENST00000447182 LRRC34Q8IZ02 419 aa20.53■□□□□ 0.88
SDCBP-204ENST00000447182 LXNQ9BS40 222 aa20.53■□□□□ 0.88
SDCBP-204ENST00000447182 EHMT1Q9H9B1 1298 aa20.53■□□□□ 0.88
SDCBP-204ENST00000447182 TPX2Q9ULW0 747 aaKnown RBP20.53■□□□□ 0.88
SDCBP-204ENST00000447182 A0A1W2PRG0 241 aa20.52■□□□□ 0.88
SDCBP-204ENST00000447182 ARHGEF35A5YM69 484 aa20.52■□□□□ 0.88
SDCBP-204ENST00000447182 RASGRF2O14827 1237 aa20.52■□□□□ 0.88
SDCBP-204ENST00000447182 MAPK13O15264 365 aa20.52■□□□□ 0.88
SDCBP-204ENST00000447182 GH2P01242 217 aa20.52■□□□□ 0.88
SDCBP-204ENST00000447182 NPR1P16066 1061 aa20.52■□□□□ 0.88
SDCBP-204ENST00000447182 MESDQ14696 234 aa20.52■□□□□ 0.88
SDCBP-204ENST00000447182 SIX1Q15475 284 aaPredicted RBP20.52■□□□□ 0.88
SDCBP-204ENST00000447182 RBM26Q5T8P6 1007 aaKnown RBP20.52■□□□□ 0.88
SDCBP-204ENST00000447182 TAOK1Q7L7X3 1001 aa20.52■□□□□ 0.88
SDCBP-204ENST00000447182 PCDHB18PQ96TA0 734 aa20.52■□□□□ 0.88
SDCBP-204ENST00000447182 SAMD15Q9P1V8 674 aa20.52■□□□□ 0.88
SDCBP-204ENST00000447182 NOCTQ9UK39 431 aaKnown RBP20.52■□□□□ 0.88
SDCBP-204ENST00000447182 TMEM110-MUSTN1A8MSY1 372 aa20.51■□□□□ 0.87
SDCBP-204ENST00000447182 VIL1P09327 827 aaKnown RBP20.51■□□□□ 0.87
SDCBP-204ENST00000447182 CHRNB2P17787 502 aa20.51■□□□□ 0.87
SDCBP-204ENST00000447182 AUHQ13825 339 aaKnown RBP20.51■□□□□ 0.87
SDCBP-204ENST00000447182 NEDD9Q14511 834 aa20.51■□□□□ 0.87
SDCBP-204ENST00000447182 FAM71AQ8IYT1 594 aa20.51■□□□□ 0.87
SDCBP-204ENST00000447182 EPS8L3Q8TE67 593 aaKnown RBP20.51■□□□□ 0.87
SDCBP-204ENST00000447182 EPS8L1Q8TE68 723 aa20.51■□□□□ 0.87
SDCBP-204ENST00000447182 PRMT1Q99873 361 aaKnown RBP20.51■□□□□ 0.87
SDCBP-204ENST00000447182 ZNF577Q9BSK1 485 aa20.51■□□□□ 0.87
SDCBP-204ENST00000447182 PASKQ96RG2 1323 aa20.51■□□□□ 0.87
SDCBP-204ENST00000447182 K7ENM7 598 aa20.51■□□□□ 0.87
SDCBP-204ENST00000447182 CYP1A2P05177 515 aa20.51■□□□□ 0.87
SDCBP-204ENST00000447182 FGFR4P22455 802 aa20.51■□□□□ 0.87
SDCBP-204ENST00000447182 MCCD1P59942 119 aaPredicted RBP20.51■□□□□ 0.87
SDCBP-204ENST00000447182 C1orf220Q5T0J3 134 aa20.51■□□□□ 0.87
SDCBP-204ENST00000447182 UBAP2Q5T6F2 1119 aaKnown RBP20.51■□□□□ 0.87
SDCBP-204ENST00000447182 STRIP1Q5VSL9 837 aa20.51■□□□□ 0.87
SDCBP-204ENST00000447182 TRMT10CQ7L0Y3 403 aaKnown RBP20.51■□□□□ 0.87
SDCBP-204ENST00000447182 CCDC105Q8IYK2 499 aa20.51■□□□□ 0.87
SDCBP-204ENST00000447182 SLCO2A1Q92959 643 aa20.51■□□□□ 0.87
SDCBP-204ENST00000447182 TEKT3Q9BXF9 490 aa20.51■□□□□ 0.87
SDCBP-204ENST00000447182 NSRP1Q9H0G5 558 aaKnown RBP20.51■□□□□ 0.87
SDCBP-204ENST00000447182 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.51■□□□□ 0.87
SDCBP-204ENST00000447182 MCM8Q9UJA3 840 aa20.51■□□□□ 0.87
SDCBP-204ENST00000447182 USP21Q9UK80 565 aa20.51■□□□□ 0.87
SDCBP-204ENST00000447182 SMIM23A6NLE4 172 aa20.5■□□□□ 0.87
SDCBP-204ENST00000447182 ATP2C2O75185 946 aa20.5■□□□□ 0.87
SDCBP-204ENST00000447182 ALDH1B1P30837 517 aa20.5■□□□□ 0.87
SDCBP-204ENST00000447182 RBM5P52756 815 aaKnown RBP eCLIP20.5■□□□□ 0.87
SDCBP-204ENST00000447182 CHADLQ6NUI6 762 aa20.5■□□□□ 0.87
SDCBP-204ENST00000447182 CXorf56Q9H5V9 222 aa20.5■□□□□ 0.87
SDCBP-204ENST00000447182 LRRC19Q9H756 370 aa20.5■□□□□ 0.87
SDCBP-204ENST00000447182 LARSQ9P2J5 1176 aaKnown RBP20.5■□□□□ 0.87
SDCBP-204ENST00000447182 FAM170AA1A519 330 aa20.5■□□□□ 0.87
SDCBP-204ENST00000447182 C21orf2O43822 256 aa20.5■□□□□ 0.87
SDCBP-204ENST00000447182 SGPL1O95470 568 aa20.5■□□□□ 0.87
SDCBP-204ENST00000447182 ARP10275 920 aa20.5■□□□□ 0.87
SDCBP-204ENST00000447182 RARAP10276 462 aa20.5■□□□□ 0.87
SDCBP-204ENST00000447182 SLC8A1P32418 973 aa20.5■□□□□ 0.87
SDCBP-204ENST00000447182 CNGA2Q16280 664 aa20.5■□□□□ 0.87
SDCBP-204ENST00000447182 ZNF746Q6NUN9 644 aaPredicted RBP20.5■□□□□ 0.87
SDCBP-204ENST00000447182 NOP9Q86U38 636 aaKnown RBP20.5■□□□□ 0.87
SDCBP-204ENST00000447182 ACCSQ96QU6 501 aa20.5■□□□□ 0.87
SDCBP-204ENST00000447182 SERPINA10Q9UK55 444 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 670 ms