RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 TAS1R1Q7RTX1 841 aa27.21■■□□□ 1.95
PMS1-214ENST00000446877 RNF149Q8NC42 400 aa27.21■■□□□ 1.95
PMS1-214ENST00000446877 BMP2KQ9NSY1 1161 aaPredicted RBP27.21■■□□□ 1.95
PMS1-214ENST00000446877 VAV3Q9UKW4 847 aa27.21■■□□□ 1.95
PMS1-214ENST00000446877 NARSO43776 548 aaKnown RBP27.2■■□□□ 1.94
PMS1-214ENST00000446877 SLC37A4O43826 429 aa27.2■■□□□ 1.94
PMS1-214ENST00000446877 CFHP08603 1231 aa27.2■■□□□ 1.94
PMS1-214ENST00000446877 RUFY3Q7L099 469 aa27.2■■□□□ 1.94
PMS1-214ENST00000446877 COLGALT2Q8IYK4 626 aa27.2■■□□□ 1.94
PMS1-214ENST00000446877 RHOBTB2Q9BYZ6 727 aa27.2■■□□□ 1.94
PMS1-214ENST00000446877 CCDC194A0A1B0GVG4 234 aa27.19■■□□□ 1.94
PMS1-214ENST00000446877 INPPL1O15357 1258 aa27.19■■□□□ 1.94
PMS1-214ENST00000446877 REC8O95072 547 aa27.19■■□□□ 1.94
PMS1-214ENST00000446877 MYBP10242 640 aa27.19■■□□□ 1.94
PMS1-214ENST00000446877 YWHABP31946 246 aaKnown RBP27.19■■□□□ 1.94
PMS1-214ENST00000446877 PCBP1Q15365 356 aaKnown RBP eCLIP27.19■■□□□ 1.94
PMS1-214ENST00000446877 ERMP1Q7Z2K6 904 aa27.19■■□□□ 1.94
PMS1-214ENST00000446877 FERMT3Q86UX7 667 aa27.19■■□□□ 1.94
PMS1-214ENST00000446877 KCNG4Q8TDN1 519 aa27.19■■□□□ 1.94
PMS1-214ENST00000446877 RSAD2Q8WXG1 361 aa27.19■■□□□ 1.94
PMS1-214ENST00000446877 SMG7Q92540 1137 aaKnown RBP27.19■■□□□ 1.94
PMS1-214ENST00000446877 NXPE3Q969Y0 559 aa27.19■■□□□ 1.94
PMS1-214ENST00000446877 PIDD1Q9HB75 910 aa27.19■■□□□ 1.94
PMS1-214ENST00000446877 KCNMB3Q9NPA1 279 aa27.19■■□□□ 1.94
PMS1-214ENST00000446877 MARCH5Q9NX47 278 aa27.19■■□□□ 1.94
PMS1-214ENST00000446877 IPPQ9Y573 584 aa27.19■■□□□ 1.94
PMS1-214ENST00000446877 WDR81Q562E7 1941 aa27.19■■□□□ 1.94
PMS1-214ENST00000446877 CLUHO75153 1309 aa27.18■■□□□ 1.94
PMS1-214ENST00000446877 ARL5CA6NH57 179 aa27.18■■□□□ 1.94
PMS1-214ENST00000446877 N4BP1O75113 896 aaKnown RBP27.18■■□□□ 1.94
PMS1-214ENST00000446877 GCFC2P16383 781 aaKnown RBP27.18■■□□□ 1.94
PMS1-214ENST00000446877 AXLP30530 894 aa27.18■■□□□ 1.94
PMS1-214ENST00000446877 ID4P47928 161 aa27.18■■□□□ 1.94
PMS1-214ENST00000446877 EMC2Q15006 297 aa27.18■■□□□ 1.94
PMS1-214ENST00000446877 EPHA7Q15375 998 aa27.18■■□□□ 1.94
PMS1-214ENST00000446877 XKR9Q5GH70 373 aa27.18■■□□□ 1.94
PMS1-214ENST00000446877 KIAA0319Q5VV43 1072 aa27.18■■□□□ 1.94
PMS1-214ENST00000446877 PPP4R3AQ6IN85 833 aa27.18■■□□□ 1.94
PMS1-214ENST00000446877 NOTUMQ6P988 496 aa27.18■■□□□ 1.94
PMS1-214ENST00000446877 C4orf19Q8IY42 314 aa27.18■■□□□ 1.94
PMS1-214ENST00000446877 SMG8Q8ND04 991 aaKnown RBP27.18■■□□□ 1.94
PMS1-214ENST00000446877 HDAC7Q8WUI4 952 aa27.18■■□□□ 1.94
PMS1-214ENST00000446877 CCDC51Q96ER9 411 aa27.18■■□□□ 1.94
PMS1-214ENST00000446877 ZNF274Q96GC6 653 aaPredicted RBP27.18■■□□□ 1.94
PMS1-214ENST00000446877 GAD1Q99259 594 aa27.18■■□□□ 1.94
PMS1-214ENST00000446877 LXNQ9BS40 222 aa27.18■■□□□ 1.94
PMS1-214ENST00000446877 COLEC11Q9BWP8 271 aa27.18■■□□□ 1.94
PMS1-214ENST00000446877 RXFP1Q9HBX9 757 aa27.18■■□□□ 1.94
PMS1-214ENST00000446877 EPS15L1Q9UBC2 864 aa27.18■■□□□ 1.94
PMS1-214ENST00000446877 RFPL2O75678 378 aa27.17■■□□□ 1.94
PMS1-214ENST00000446877 MLH1P40692 756 aa27.17■■□□□ 1.94
PMS1-214ENST00000446877 TOB2Q14106 344 aaPredicted RBP27.17■■□□□ 1.94
PMS1-214ENST00000446877 NPY5RQ15761 445 aa27.17■■□□□ 1.94
PMS1-214ENST00000446877 NEK8Q86SG6 692 aa27.17■■□□□ 1.94
PMS1-214ENST00000446877 HACE1Q8IYU2 909 aa27.17■■□□□ 1.94
PMS1-214ENST00000446877 SLC44A3Q8N4M1 653 aa27.17■■□□□ 1.94
PMS1-214ENST00000446877 AIFM3Q96NN9 605 aa27.17■■□□□ 1.94
PMS1-214ENST00000446877 PLEKHA4Q9H4M7 779 aa27.17■■□□□ 1.94
PMS1-214ENST00000446877 ZSWIM4Q9H7M6 989 aa27.17■■□□□ 1.94
PMS1-214ENST00000446877 WRAP73Q9P2S5 460 aaPredicted RBP27.17■■□□□ 1.94
PMS1-214ENST00000446877 KCNJ14Q9UNX9 436 aa27.17■■□□□ 1.94
PMS1-214ENST00000446877 CYP46A1Q9Y6A2 500 aa27.17■■□□□ 1.94
PMS1-214ENST00000446877 GVINP1Q7Z2Y8 2422 aa27.16■■□□□ 1.94
PMS1-214ENST00000446877 CCNT1O60563 726 aaKnown RBP27.16■■□□□ 1.94
PMS1-214ENST00000446877 SPATA31D3P0C874 917 aa27.16■■□□□ 1.94
PMS1-214ENST00000446877 DSG1Q02413 1049 aa27.16■■□□□ 1.94
PMS1-214ENST00000446877 MXD4Q14582 209 aaPredicted RBP27.16■■□□□ 1.94
PMS1-214ENST00000446877 SPATA31D4Q6ZUB0 917 aa27.16■■□□□ 1.94
PMS1-214ENST00000446877 PALB2Q86YC2 1186 aa27.16■■□□□ 1.94
PMS1-214ENST00000446877 MTRQ99707 1265 aa27.16■■□□□ 1.94
PMS1-214ENST00000446877 NAP1L4Q99733 375 aaKnown RBP27.16■■□□□ 1.94
PMS1-214ENST00000446877 EIF2AQ9BY44 585 aaKnown RBP27.16■■□□□ 1.94
PMS1-214ENST00000446877 TRIM6Q9C030 488 aaPredicted RBP27.16■■□□□ 1.94
PMS1-214ENST00000446877 RNF39Q9H2S5 420 aa27.16■■□□□ 1.94
PMS1-214ENST00000446877 SEMA4AQ9H3S1 761 aa27.16■■□□□ 1.94
PMS1-214ENST00000446877 ZSWIM6Q9HCJ5 1215 aa27.16■■□□□ 1.94
PMS1-214ENST00000446877 INO80B-WBP1J3KQ70 363 aa27.15■■□□□ 1.94
PMS1-214ENST00000446877 TBX3O15119 743 aa27.15■■□□□ 1.94
PMS1-214ENST00000446877 TSPAN1O60635 241 aa27.15■■□□□ 1.94
PMS1-214ENST00000446877 SCNN1GP51170 649 aa27.15■■□□□ 1.94
PMS1-214ENST00000446877 STK3Q13188 491 aa27.15■■□□□ 1.94
PMS1-214ENST00000446877 TFDP1Q14186 410 aa27.15■■□□□ 1.94
PMS1-214ENST00000446877 NCAPH2Q6IBW4 605 aa27.15■■□□□ 1.94
PMS1-214ENST00000446877 MYADMQ96S97 322 aa27.15■■□□□ 1.94
PMS1-214ENST00000446877 APOL6Q9BWW8 343 aa27.15■■□□□ 1.94
PMS1-214ENST00000446877 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.15■■□□□ 1.94
PMS1-214ENST00000446877 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.15■■□□□ 1.94
PMS1-214ENST00000446877 RGL1Q9NZL6 768 aa27.15■■□□□ 1.94
PMS1-214ENST00000446877 CA14Q9ULX7 337 aa27.15■■□□□ 1.94
PMS1-214ENST00000446877 KRBA1A5PL33 1030 aa27.14■■□□□ 1.94
PMS1-214ENST00000446877 C1RP00736 705 aa27.14■■□□□ 1.94
PMS1-214ENST00000446877 SRFP11831 508 aa27.14■■□□□ 1.94
PMS1-214ENST00000446877 XBP1P17861 261 aa27.14■■□□□ 1.94
PMS1-214ENST00000446877 PTENP60484 403 aa27.14■■□□□ 1.94
PMS1-214ENST00000446877 DSC1Q08554 894 aa27.14■■□□□ 1.94
PMS1-214ENST00000446877 RNF168Q8IYW5 571 aaPredicted RBP27.14■■□□□ 1.94
PMS1-214ENST00000446877 ZFP42Q96MM3 310 aa27.14■■□□□ 1.94
PMS1-214ENST00000446877 LARP6Q9BRS8 491 aaKnown RBP27.14■■□□□ 1.94
PMS1-214ENST00000446877 CSRNP2Q9H175 543 aa27.14■■□□□ 1.94
PMS1-214ENST00000446877 GIT1Q9Y2X7 761 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms