RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 GUCY2FP51841 1108 aa18.18■□□□□ 0.5
LAPTM4B-201ENST00000445593 DRP2Q13474 957 aa18.18■□□□□ 0.5
LAPTM4B-201ENST00000445593 EMC2Q15006 297 aa18.18■□□□□ 0.5
LAPTM4B-201ENST00000445593 NFIL3Q16649 462 aa18.18■□□□□ 0.5
LAPTM4B-201ENST00000445593 C2CD6Q53TS8 623 aa18.18■□□□□ 0.5
LAPTM4B-201ENST00000445593 ABHD15Q6UXT9 468 aa18.18■□□□□ 0.5
LAPTM4B-201ENST00000445593 EXOC7Q9UPT5 735 aa18.18■□□□□ 0.5
LAPTM4B-201ENST00000445593 HEXIM1O94992 359 aaKnown RBP18.18■□□□□ 0.5
LAPTM4B-201ENST00000445593 SUPT20HL2P0C7V6 817 aa18.18■□□□□ 0.5
LAPTM4B-201ENST00000445593 UBA1P22314 1058 aaKnown RBP18.18■□□□□ 0.5
LAPTM4B-201ENST00000445593 TMEM63BQ5T3F8 832 aa18.18■□□□□ 0.5
LAPTM4B-201ENST00000445593 CCNI2Q6ZMN8 369 aaPredicted RBP18.18■□□□□ 0.5
LAPTM4B-201ENST00000445593 TATDN2Q93075 761 aa18.18■□□□□ 0.5
LAPTM4B-201ENST00000445593 EPB41L5Q9HCM4 733 aa18.18■□□□□ 0.5
LAPTM4B-201ENST00000445593 STBD1O95210 358 aa18.17■□□□□ 0.5
LAPTM4B-201ENST00000445593 ALDH5A1P51649 535 aaPredicted RBP18.17■□□□□ 0.5
LAPTM4B-201ENST00000445593 WNT7BP56706 349 aa18.17■□□□□ 0.5
LAPTM4B-201ENST00000445593 GABPB1Q06547 395 aaPredicted RBP18.17■□□□□ 0.5
LAPTM4B-201ENST00000445593 HSP90B2PQ58FF3 399 aa18.17■□□□□ 0.5
LAPTM4B-201ENST00000445593 ZBTB41Q5SVQ8 909 aa18.17■□□□□ 0.5
LAPTM4B-201ENST00000445593 MAP4K3Q8IVH8 894 aa18.17■□□□□ 0.5
LAPTM4B-201ENST00000445593 METTL13Q8N6R0 699 aa18.17■□□□□ 0.5
LAPTM4B-201ENST00000445593 ASAP3Q8TDY4 903 aa18.17■□□□□ 0.5
LAPTM4B-201ENST00000445593 BTBD6Q96KE9 485 aa18.17■□□□□ 0.5
LAPTM4B-201ENST00000445593 KREMEN1Q96MU8 473 aa18.17■□□□□ 0.5
LAPTM4B-201ENST00000445593 CTTNBP2NLQ9P2B4 639 aa18.17■□□□□ 0.5
LAPTM4B-201ENST00000445593 SPATA31C2B4DYI2 1134 aa18.17■□□□□ 0.5
LAPTM4B-201ENST00000445593 DGAT1O75907 488 aa18.17■□□□□ 0.5
LAPTM4B-201ENST00000445593 MAPTP10636 758 aaKnown RBP18.17■□□□□ 0.5
LAPTM4B-201ENST00000445593 OAZ1P54368 228 aa18.17■□□□□ 0.5
LAPTM4B-201ENST00000445593 ALCAMQ13740 583 aa18.17■□□□□ 0.5
LAPTM4B-201ENST00000445593 TAS1R3Q7RTX0 852 aa18.17■□□□□ 0.5
LAPTM4B-201ENST00000445593 SLC30A5Q8TAD4 765 aa18.17■□□□□ 0.5
LAPTM4B-201ENST00000445593 OLIG1Q8TAK6 271 aa18.17■□□□□ 0.5
LAPTM4B-201ENST00000445593 KIFAP3Q92845 792 aa18.17■□□□□ 0.5
LAPTM4B-201ENST00000445593 FAM212AQ96EL1 285 aa18.17■□□□□ 0.5
LAPTM4B-201ENST00000445593 PPP1R16BQ96T49 567 aa18.17■□□□□ 0.5
LAPTM4B-201ENST00000445593 AGPAT1Q99943 283 aa18.17■□□□□ 0.5
LAPTM4B-201ENST00000445593 FBXL5Q9UKA1 691 aa18.17■□□□□ 0.5
LAPTM4B-201ENST00000445593 NFU1Q9UMS0 254 aa18.17■□□□□ 0.5
LAPTM4B-201ENST00000445593 EIF3JO75822 258 aaKnown RBP18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 FTLP02792 175 aaPredicted RBP18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 ITGA4P13612 1032 aa18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 TNNI1P19237 187 aa18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 TUBB4BP68371 445 aa18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 BIRC3Q13489 604 aa18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 SPOPLQ6IQ16 392 aa18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 AADACL2Q6P093 401 aa18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 CPNE8Q86YQ8 564 aa18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 PARD3BQ8TEW8 1205 aa18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 SPATC1LQ9H0A9 340 aa18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 DDX47Q9H0S4 455 aaKnown RBP18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 TXNRD2Q9NNW7 524 aa18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 STIM2Q9P246 746 aa18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 ATP8B1O43520 1251 aa18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 PRLRP16471 622 aa18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 CARSP49589 748 aaKnown RBP18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 LBX2Q6XYB7 198 aa18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 MMGT1Q8N4V1 131 aa18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 LRRC57Q8N9N7 239 aa18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 TARS2Q9BW92 718 aaKnown RBP18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 SOWAHBA6NEL2 793 aa18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 GGPS1O95749 300 aa18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 MMEP08473 750 aa18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 GPS2Q13227 327 aa18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 MAP9Q49MG5 647 aa18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 CDR2LQ86X02 465 aaPredicted RBP18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 CCDC125Q86Z20 511 aa18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 GLG1Q92896 1179 aa18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 PNMA2Q9UL42 364 aa18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 COG5Q9UP83 839 aa18.16■□□□□ 0.5
LAPTM4B-201ENST00000445593 NLRP11P59045 1033 aaKnown RBP18.15■□□□□ 0.5
LAPTM4B-201ENST00000445593 SV2AQ7L0J3 742 aa18.15■□□□□ 0.5
LAPTM4B-201ENST00000445593 NOP9Q86U38 636 aaKnown RBP18.15■□□□□ 0.5
LAPTM4B-201ENST00000445593 LRRC71Q8N4P6 559 aa18.15■□□□□ 0.5
LAPTM4B-201ENST00000445593 DEPTORQ8TB45 409 aa18.15■□□□□ 0.5
LAPTM4B-201ENST00000445593 CDHR1Q96JP9 859 aa18.15■□□□□ 0.5
LAPTM4B-201ENST00000445593 IWS1Q96ST2 819 aa18.15■□□□□ 0.5
LAPTM4B-201ENST00000445593 TRIM31Q9BZY9 425 aa18.15■□□□□ 0.5
LAPTM4B-201ENST00000445593 ASCC2Q9H1I8 757 aaPredicted RBP18.15■□□□□ 0.5
LAPTM4B-201ENST00000445593 TSKSQ9UJT2 592 aa18.15■□□□□ 0.5
LAPTM4B-201ENST00000445593 RLFQ13129 1914 aa18.15■□□□□ 0.5
LAPTM4B-201ENST00000445593 LMAN1P49257 510 aa18.15■□□□□ 0.5
LAPTM4B-201ENST00000445593 MKRN4PQ13434 485 aaPredicted RBP18.15■□□□□ 0.5
LAPTM4B-201ENST00000445593 SKIDA1Q1XH10 827 aa18.15■□□□□ 0.5
LAPTM4B-201ENST00000445593 Q3C1V9 767 aa18.15■□□□□ 0.5
LAPTM4B-201ENST00000445593 XKR3Q5GH77 459 aa18.15■□□□□ 0.5
LAPTM4B-201ENST00000445593 C9orf131Q5VYM1 1079 aa18.15■□□□□ 0.5
LAPTM4B-201ENST00000445593 KRT39Q6A163 491 aa18.15■□□□□ 0.5
LAPTM4B-201ENST00000445593 ZBTB33Q86T24 672 aa18.15■□□□□ 0.5
LAPTM4B-201ENST00000445593 DDX42Q86XP3 938 aaKnown RBP eCLIP18.15■□□□□ 0.5
LAPTM4B-201ENST00000445593 COPS5Q92905 334 aa18.15■□□□□ 0.5
LAPTM4B-201ENST00000445593 PCDHB18PQ96TA0 734 aa18.15■□□□□ 0.5
LAPTM4B-201ENST00000445593 ADARB2Q9NS39 739 aaKnown RBP18.15■□□□□ 0.5
LAPTM4B-201ENST00000445593 MAFGO15525 162 aa18.14■□□□□ 0.49
LAPTM4B-201ENST00000445593 SCARA3Q6AZY7 606 aa18.14■□□□□ 0.49
LAPTM4B-201ENST00000445593 XRRA1Q6P2D8 792 aa18.14■□□□□ 0.49
LAPTM4B-201ENST00000445593 MCPH1Q8NEM0 835 aa18.14■□□□□ 0.49
LAPTM4B-201ENST00000445593 NOC2LQ9Y3T9 749 aaKnown RBP18.14■□□□□ 0.49
LAPTM4B-201ENST00000445593 TTLL13PA6NNM8 815 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms