RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 ITGA4P13612 1032 aa15.47■□□□□ 0.07
SSBP3-208ENST00000444533 FAM189BP81408 668 aa15.47■□□□□ 0.07
SSBP3-208ENST00000444533 COASYQ13057 564 aa15.47■□□□□ 0.07
SSBP3-208ENST00000444533 BTG3Q14201 252 aaPredicted RBP15.47■□□□□ 0.07
SSBP3-208ENST00000444533 AMHR2Q16671 573 aa15.47■□□□□ 0.07
SSBP3-208ENST00000444533 ZNF568Q3ZCX4 644 aa15.47■□□□□ 0.07
SSBP3-208ENST00000444533 SPOUT1Q5T280 376 aaKnown RBP15.47■□□□□ 0.07
SSBP3-208ENST00000444533 ZNF697Q5TEC3 545 aa15.47■□□□□ 0.07
SSBP3-208ENST00000444533 PPP2R2DQ66LE6 453 aa15.47■□□□□ 0.07
SSBP3-208ENST00000444533 ZPBP2Q6X784 338 aa15.47■□□□□ 0.07
SSBP3-208ENST00000444533 CLEC17AQ6ZS10 378 aa15.47■□□□□ 0.07
SSBP3-208ENST00000444533 SYCP3Q8IZU3 236 aa15.47■□□□□ 0.07
SSBP3-208ENST00000444533 FMR1NBQ8N0W7 255 aaPredicted RBP15.47■□□□□ 0.07
SSBP3-208ENST00000444533 FIBCD1Q8N539 461 aa15.47■□□□□ 0.07
SSBP3-208ENST00000444533 URGCPQ8TCY9 931 aa15.47■□□□□ 0.07
SSBP3-208ENST00000444533 TIGD1Q96MW7 591 aa15.47■□□□□ 0.07
SSBP3-208ENST00000444533 ACCSQ96QU6 501 aa15.47■□□□□ 0.07
SSBP3-208ENST00000444533 ST6GALNAC4Q9H4F1 302 aa15.47■□□□□ 0.07
SSBP3-208ENST00000444533 TBC1D7Q9P0N9 293 aa15.47■□□□□ 0.07
SSBP3-208ENST00000444533 TBX20Q9UMR3 447 aa15.47■□□□□ 0.07
SSBP3-208ENST00000444533 TNFSF13BQ9Y275 285 aa15.47■□□□□ 0.07
SSBP3-208ENST00000444533 RWDD3Q9Y3V2 267 aa15.47■□□□□ 0.07
SSBP3-208ENST00000444533 FRMD3A2A2Y4 597 aa15.46■□□□□ 0.07
SSBP3-208ENST00000444533 CLDN3O15551 220 aa15.46■□□□□ 0.07
SSBP3-208ENST00000444533 TOM1L1O75674 476 aa15.46■□□□□ 0.07
SSBP3-208ENST00000444533 DGKIO75912 1065 aa15.46■□□□□ 0.07
SSBP3-208ENST00000444533 KIF20AO95235 890 aa15.46■□□□□ 0.07
SSBP3-208ENST00000444533 NMT1P30419 496 aaKnown RBP15.46■□□□□ 0.07
SSBP3-208ENST00000444533 GTF2BQ00403 316 aa15.46■□□□□ 0.07
SSBP3-208ENST00000444533 PSMD2Q13200 908 aa15.46■□□□□ 0.07
SSBP3-208ENST00000444533 CUL4BQ13620 913 aa15.46■□□□□ 0.07
SSBP3-208ENST00000444533 FAM26FQ5R3K3 315 aa15.46■□□□□ 0.07
SSBP3-208ENST00000444533 FAM109BQ6ICB4 259 aaPredicted RBP15.46■□□□□ 0.07
SSBP3-208ENST00000444533 GPR153Q6NV75 609 aa15.46■□□□□ 0.07
SSBP3-208ENST00000444533 ZNF720Q7Z2F6 126 aa15.46■□□□□ 0.07
SSBP3-208ENST00000444533 TMCO2Q7Z6W1 182 aaPredicted RBP15.46■□□□□ 0.07
SSBP3-208ENST00000444533 CMTR2Q8IYT2 770 aaKnown RBP15.46■□□□□ 0.07
SSBP3-208ENST00000444533 ACO2Q99798 780 aaKnown RBP15.46■□□□□ 0.07
SSBP3-208ENST00000444533 MRPL9Q9BYD2 267 aaKnown RBP15.46■□□□□ 0.07
SSBP3-208ENST00000444533 PDZD7Q9H5P4 517 aa15.46■□□□□ 0.07
SSBP3-208ENST00000444533 TMEM206Q9H813 350 aa15.46■□□□□ 0.07
SSBP3-208ENST00000444533 RMND1Q9NWS8 449 aa15.46■□□□□ 0.07
SSBP3-208ENST00000444533 ANKFY1Q9P2R3 1169 aa15.46■□□□□ 0.07
SSBP3-208ENST00000444533 TRIOBPQ9H2D6 2365 aa15.45■□□□□ 0.06
SSBP3-208ENST00000444533 CARNS1A5YM72 827 aa15.45■□□□□ 0.06
SSBP3-208ENST00000444533 TBKBP1A7MCY6 615 aa15.45■□□□□ 0.06
SSBP3-208ENST00000444533 CA3P07451 260 aa15.45■□□□□ 0.06
SSBP3-208ENST00000444533 YARSP54577 528 aaKnown RBP15.45■□□□□ 0.06
SSBP3-208ENST00000444533 HTRA4P83105 476 aaPredicted RBP15.45■□□□□ 0.06
SSBP3-208ENST00000444533 RNASELQ05823 741 aaKnown RBP15.45■□□□□ 0.06
SSBP3-208ENST00000444533 POSTNQ15063 836 aa15.45■□□□□ 0.06
SSBP3-208ENST00000444533 KYAT1Q16773 422 aa15.45■□□□□ 0.06
SSBP3-208ENST00000444533 SLFN12LQ6IEE8 588 aa15.45■□□□□ 0.06
SSBP3-208ENST00000444533 MPZL3Q6UWV2 235 aa15.45■□□□□ 0.06
SSBP3-208ENST00000444533 GRAMD1CQ8IYS0 662 aa15.45■□□□□ 0.06
SSBP3-208ENST00000444533 KCNN1Q92952 543 aa15.45■□□□□ 0.06
SSBP3-208ENST00000444533 SAMD11Q96NU1 681 aa15.45■□□□□ 0.06
SSBP3-208ENST00000444533 RPS6KC1Q96S38 1066 aa15.45■□□□□ 0.06
SSBP3-208ENST00000444533 CCDC94Q9BW85 323 aaPredicted RBP15.45■□□□□ 0.06
SSBP3-208ENST00000444533 TARS2Q9BW92 718 aaKnown RBP15.45■□□□□ 0.06
SSBP3-208ENST00000444533 APOL6Q9BWW8 343 aa15.45■□□□□ 0.06
SSBP3-208ENST00000444533 GTPBP4Q9BZE4 634 aaKnown RBP15.45■□□□□ 0.06
SSBP3-208ENST00000444533 TMEM117Q9H0C3 514 aa15.45■□□□□ 0.06
SSBP3-208ENST00000444533 NKX2-4Q9H2Z4 354 aa15.45■□□□□ 0.06
SSBP3-208ENST00000444533 RSAD1Q9HA92 442 aa15.45■□□□□ 0.06
SSBP3-208ENST00000444533 AAASQ9NRG9 546 aa15.45■□□□□ 0.06
SSBP3-208ENST00000444533 KANSL3Q9P2N6 904 aa15.45■□□□□ 0.06
SSBP3-208ENST00000444533 PARP2Q9UGN5 583 aa15.45■□□□□ 0.06
SSBP3-208ENST00000444533 IPPQ9Y573 584 aa15.45■□□□□ 0.06
SSBP3-208ENST00000444533 EIF3DO15371 548 aaKnown RBP eCLIP15.44■□□□□ 0.06
SSBP3-208ENST00000444533 NR1I2O75469 434 aa15.44■□□□□ 0.06
SSBP3-208ENST00000444533 RPN1P04843 607 aaKnown RBP15.44■□□□□ 0.06
SSBP3-208ENST00000444533 MCF2P10911 925 aa15.44■□□□□ 0.06
SSBP3-208ENST00000444533 FGFR1P11362 822 aa15.44■□□□□ 0.06
SSBP3-208ENST00000444533 PBX2P40425 430 aa15.44■□□□□ 0.06
SSBP3-208ENST00000444533 HSP90AA2PQ14568 343 aaPredicted RBP15.44■□□□□ 0.06
SSBP3-208ENST00000444533 NOLC1Q14978 699 aaKnown RBP eCLIP15.44■□□□□ 0.06
SSBP3-208ENST00000444533 PAN2Q504Q3 1202 aaKnown RBP15.44■□□□□ 0.06
SSBP3-208ENST00000444533 L1TD1Q5T7N2 865 aaKnown RBP15.44■□□□□ 0.06
SSBP3-208ENST00000444533 NT5DC1Q5TFE4 455 aa15.44■□□□□ 0.06
SSBP3-208ENST00000444533 CDR2LQ86X02 465 aaPredicted RBP15.44■□□□□ 0.06
SSBP3-208ENST00000444533 MAP4K3Q8IVH8 894 aa15.44■□□□□ 0.06
SSBP3-208ENST00000444533 LRRC43Q8N309 656 aa15.44■□□□□ 0.06
SSBP3-208ENST00000444533 FAM193BQ96PV7 902 aaPredicted RBP15.44■□□□□ 0.06
SSBP3-208ENST00000444533 EIF2AQ9BY44 585 aaKnown RBP15.44■□□□□ 0.06
SSBP3-208ENST00000444533 TOPORSQ9NS56 1045 aaPredicted RBP15.44■□□□□ 0.06
SSBP3-208ENST00000444533 INPP5FQ9Y2H2 1132 aa15.44■□□□□ 0.06
SSBP3-208ENST00000444533 GIT1Q9Y2X7 761 aa15.44■□□□□ 0.06
SSBP3-208ENST00000444533 TTC3P53804 2025 aa15.44■□□□□ 0.06
SSBP3-208ENST00000444533 UBE4BO95155 1302 aa15.43■□□□□ 0.06
SSBP3-208ENST00000444533 GADD45BO75293 160 aaPredicted RBP15.43■□□□□ 0.06
SSBP3-208ENST00000444533 HARSP12081 509 aaKnown RBP15.43■□□□□ 0.06
SSBP3-208ENST00000444533 SNW1Q13573 536 aaKnown RBP15.43■□□□□ 0.06
SSBP3-208ENST00000444533 ZC2HC1CQ53FD0 456 aaPredicted RBP15.43■□□□□ 0.06
SSBP3-208ENST00000444533 NOMO2Q5JPE7 1267 aa15.43■□□□□ 0.06
SSBP3-208ENST00000444533 UBXN11Q5T124 520 aa15.43■□□□□ 0.06
SSBP3-208ENST00000444533 MRPL10Q7Z7H8 261 aaKnown RBP15.43■□□□□ 0.06
SSBP3-208ENST00000444533 ZBTB33Q86T24 672 aa15.43■□□□□ 0.06
SSBP3-208ENST00000444533 ENGASEQ8NFI3 743 aa15.43■□□□□ 0.06
SSBP3-208ENST00000444533 HELQQ8TDG4 1101 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms