RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 RASSF8Q8NHQ8 419 aa20.54■□□□□ 0.88
CCDC188-202ENST00000444532 PABPC5Q96DU9 382 aaKnown RBP20.54■□□□□ 0.88
CCDC188-202ENST00000444532 USP28Q96RU2 1077 aa20.54■□□□□ 0.88
CCDC188-202ENST00000444532 NTPCRQ9BSD7 190 aaKnown RBP20.54■□□□□ 0.88
CCDC188-202ENST00000444532 RNF39Q9H2S5 420 aa20.54■□□□□ 0.88
CCDC188-202ENST00000444532 TMEM134Q9H6X4 195 aa20.54■□□□□ 0.88
CCDC188-202ENST00000444532 NRDE2Q9H7Z3 1164 aa20.54■□□□□ 0.88
CCDC188-202ENST00000444532 GIT1Q9Y2X7 761 aa20.54■□□□□ 0.88
CCDC188-202ENST00000444532 MYO7AQ13402 2215 aa20.53■□□□□ 0.88
CCDC188-202ENST00000444532 ZC3H11AO75152 810 aaKnown RBP eCLIP20.53■□□□□ 0.88
CCDC188-202ENST00000444532 IRS1P35568 1242 aa20.53■□□□□ 0.88
CCDC188-202ENST00000444532 PBX3P40426 434 aa20.53■□□□□ 0.88
CCDC188-202ENST00000444532 HYAL1Q12794 435 aa20.53■□□□□ 0.88
CCDC188-202ENST00000444532 KARSQ15046 597 aaKnown RBP20.53■□□□□ 0.88
CCDC188-202ENST00000444532 TMEM132AQ24JP5 1023 aa20.53■□□□□ 0.88
CCDC188-202ENST00000444532 CDR2LQ86X02 465 aaPredicted RBP20.53■□□□□ 0.88
CCDC188-202ENST00000444532 MICAL1Q8TDZ2 1067 aa20.53■□□□□ 0.88
CCDC188-202ENST00000444532 ZNF396Q96N95 335 aaPredicted RBP20.53■□□□□ 0.88
CCDC188-202ENST00000444532 FAM193BQ96PV7 902 aaPredicted RBP20.53■□□□□ 0.88
CCDC188-202ENST00000444532 ADPGKQ9BRR6 497 aa20.53■□□□□ 0.88
CCDC188-202ENST00000444532 KIFC3Q9BVG8 833 aa20.53■□□□□ 0.88
CCDC188-202ENST00000444532 COL25A1Q9BXS0 654 aaPredicted RBP20.53■□□□□ 0.88
CCDC188-202ENST00000444532 NXF3Q9H4D5 531 aaKnown RBP20.53■□□□□ 0.88
CCDC188-202ENST00000444532 PDZD7Q9H5P4 517 aa20.53■□□□□ 0.88
CCDC188-202ENST00000444532 KMT5AQ9NQR1 393 aa20.53■□□□□ 0.88
CCDC188-202ENST00000444532 HES2Q9Y543 173 aa20.53■□□□□ 0.88
CCDC188-202ENST00000444532 ZMYM2Q9UBW7 1377 aa20.53■□□□□ 0.88
CCDC188-202ENST00000444532 ARL5CA6NH57 179 aa20.52■□□□□ 0.88
CCDC188-202ENST00000444532 TTLL13PA6NNM8 815 aa20.52■□□□□ 0.88
CCDC188-202ENST00000444532 CSPG5O95196 566 aa20.52■□□□□ 0.88
CCDC188-202ENST00000444532 GALTP07902 379 aa20.52■□□□□ 0.88
CCDC188-202ENST00000444532 BMP1P13497 986 aa20.52■□□□□ 0.88
CCDC188-202ENST00000444532 LIG1P18858 919 aa20.52■□□□□ 0.88
CCDC188-202ENST00000444532 PLCG1P19174 1290 aa20.52■□□□□ 0.88
CCDC188-202ENST00000444532 NASPP49321 788 aaPredicted RBP20.52■□□□□ 0.88
CCDC188-202ENST00000444532 AFF1P51825 1210 aaKnown RBP20.52■□□□□ 0.88
CCDC188-202ENST00000444532 ERVFC1P60507 584 aa20.52■□□□□ 0.88
CCDC188-202ENST00000444532 CTC1Q2NKJ3 1217 aa20.52■□□□□ 0.88
CCDC188-202ENST00000444532 ARSHQ5FYA8 562 aa20.52■□□□□ 0.88
CCDC188-202ENST00000444532 SPIRE2Q8WWL2 714 aa20.52■□□□□ 0.88
CCDC188-202ENST00000444532 EPSTI1Q96J88 318 aa20.52■□□□□ 0.88
CCDC188-202ENST00000444532 BLOC1S4Q9NUP1 217 aa20.52■□□□□ 0.88
CCDC188-202ENST00000444532 ARHGAP28Q9P2N2 729 aa20.52■□□□□ 0.88
CCDC188-202ENST00000444532 CCDC39Q9UFE4 941 aa20.52■□□□□ 0.88
CCDC188-202ENST00000444532 SFI1A8K8P3 1242 aa20.51■□□□□ 0.87
CCDC188-202ENST00000444532 FSCN2O14926 492 aa20.51■□□□□ 0.87
CCDC188-202ENST00000444532 ALDH2P05091 517 aa20.51■□□□□ 0.87
CCDC188-202ENST00000444532 ZSCAN22P10073 491 aaPredicted RBP20.51■□□□□ 0.87
CCDC188-202ENST00000444532 PLS3P13797 630 aa20.51■□□□□ 0.87
CCDC188-202ENST00000444532 DDIT3P35638 169 aa20.51■□□□□ 0.87
CCDC188-202ENST00000444532 SMTNP53814 917 aa20.51■□□□□ 0.87
CCDC188-202ENST00000444532 RAD51AP2Q09MP3 1159 aa20.51■□□□□ 0.87
CCDC188-202ENST00000444532 LEXMQ3ZCV2 418 aa20.51■□□□□ 0.87
CCDC188-202ENST00000444532 APBB1IPQ7Z5R6 666 aaPredicted RBP20.51■□□□□ 0.87
CCDC188-202ENST00000444532 ZNF280BQ86YH2 543 aa20.51■□□□□ 0.87
CCDC188-202ENST00000444532 KRI1Q8N9T8 703 aaKnown RBP20.51■□□□□ 0.87
CCDC188-202ENST00000444532 RAD54LQ92698 747 aa20.51■□□□□ 0.87
CCDC188-202ENST00000444532 TMEM169Q96HH4 297 aa20.51■□□□□ 0.87
CCDC188-202ENST00000444532 GAD1Q99259 594 aa20.51■□□□□ 0.87
CCDC188-202ENST00000444532 TMEM175Q9BSA9 504 aa20.51■□□□□ 0.87
CCDC188-202ENST00000444532 APOL6Q9BWW8 343 aa20.51■□□□□ 0.87
CCDC188-202ENST00000444532 GBP3Q9H0R5 595 aa20.51■□□□□ 0.87
CCDC188-202ENST00000444532 NGRNQ9NPE2 291 aaKnown RBP20.51■□□□□ 0.87
CCDC188-202ENST00000444532 DNAJB4Q9UDY4 337 aa20.51■□□□□ 0.87
CCDC188-202ENST00000444532 ODF2LQ9ULJ1 636 aa20.51■□□□□ 0.87
CCDC188-202ENST00000444532 TDRD15B5MCY1 1934 aaKnown RBP20.51■□□□□ 0.87
CCDC188-202ENST00000444532 FSD2A1L4K1 749 aa20.5■□□□□ 0.87
CCDC188-202ENST00000444532 NT5C1B-RDH14C9J2C7 533 aa20.5■□□□□ 0.87
CCDC188-202ENST00000444532 DDHD2O94830 711 aa20.5■□□□□ 0.87
CCDC188-202ENST00000444532 POMCP01189 267 aa20.5■□□□□ 0.87
CCDC188-202ENST00000444532 EDN1P05305 212 aa20.5■□□□□ 0.87
CCDC188-202ENST00000444532 KCNA5P22460 613 aa20.5■□□□□ 0.87
CCDC188-202ENST00000444532 AKAP5P24588 427 aa20.5■□□□□ 0.87
CCDC188-202ENST00000444532 TXLNAP40222 546 aa20.5■□□□□ 0.87
CCDC188-202ENST00000444532 MLH1P40692 756 aa20.5■□□□□ 0.87
CCDC188-202ENST00000444532 KCNQ1P51787 676 aa20.5■□□□□ 0.87
CCDC188-202ENST00000444532 SPECC1Q5M775 1068 aa20.5■□□□□ 0.87
CCDC188-202ENST00000444532 NT5DC1Q5TFE4 455 aa20.5■□□□□ 0.87
CCDC188-202ENST00000444532 ATF7IP2Q5U623 682 aa20.5■□□□□ 0.87
CCDC188-202ENST00000444532 USP49Q70CQ1 688 aa20.5■□□□□ 0.87
CCDC188-202ENST00000444532 GPBP1Q86WP2 473 aa20.5■□□□□ 0.87
CCDC188-202ENST00000444532 LRRC15Q8TF66 581 aa20.5■□□□□ 0.87
CCDC188-202ENST00000444532 IGSF21Q96ID5 467 aa20.5■□□□□ 0.87
CCDC188-202ENST00000444532 CLIC6Q96NY7 704 aa20.5■□□□□ 0.87
CCDC188-202ENST00000444532 IGFLR1Q9H665 355 aa20.5■□□□□ 0.87
CCDC188-202ENST00000444532 CLDND1Q9NY35 253 aa20.5■□□□□ 0.87
CCDC188-202ENST00000444532 LARSQ9P2J5 1176 aaKnown RBP20.5■□□□□ 0.87
CCDC188-202ENST00000444532 STK39Q9UEW8 545 aa20.5■□□□□ 0.87
CCDC188-202ENST00000444532 PARP2Q9UGN5 583 aa20.5■□□□□ 0.87
CCDC188-202ENST00000444532 SLC11A1P49279 550 aa20.49■□□□□ 0.87
CCDC188-202ENST00000444532 ADAM15Q13444 863 aa20.49■□□□□ 0.87
CCDC188-202ENST00000444532 DHX8Q14562 1220 aaKnown RBP20.49■□□□□ 0.87
CCDC188-202ENST00000444532 MCM6Q14566 821 aa20.49■□□□□ 0.87
CCDC188-202ENST00000444532 BMS1Q14692 1282 aaKnown RBP20.49■□□□□ 0.87
CCDC188-202ENST00000444532 STK38Q15208 465 aa20.49■□□□□ 0.87
CCDC188-202ENST00000444532 DCAF4L1Q3SXM0 396 aa20.49■□□□□ 0.87
CCDC188-202ENST00000444532 TMC7Q7Z402 723 aa20.49■□□□□ 0.87
CCDC188-202ENST00000444532 ADGRD2Q7Z7M1 963 aa20.49■□□□□ 0.87
CCDC188-202ENST00000444532 DDX53Q86TM3 631 aaKnown RBP20.49■□□□□ 0.87
CCDC188-202ENST00000444532 EFHBQ8N7U6 833 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms