RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 C17orf75Q9HAS0 396 aa20.81■□□□□ 0.92
ATPAF2-201ENST00000444058 ENTPD7Q9NQZ7 604 aa20.81■□□□□ 0.92
ATPAF2-201ENST00000444058 PCDHGC5Q9Y5F6 944 aa20.81■□□□□ 0.92
ATPAF2-201ENST00000444058 LINC01565O15544 149 aa20.8■□□□□ 0.92
ATPAF2-201ENST00000444058 NDUFV1P49821 464 aa20.8■□□□□ 0.92
ATPAF2-201ENST00000444058 COASYQ13057 564 aa20.8■□□□□ 0.92
ATPAF2-201ENST00000444058 TMEM184AQ6ZMB5 413 aa20.8■□□□□ 0.92
ATPAF2-201ENST00000444058 TMC7Q7Z402 723 aa20.8■□□□□ 0.92
ATPAF2-201ENST00000444058 RBM23Q86U06 439 aaKnown RBP20.8■□□□□ 0.92
ATPAF2-201ENST00000444058 ZNF280BQ86YH2 543 aa20.8■□□□□ 0.92
ATPAF2-201ENST00000444058 MRPL43Q8N983 215 aaKnown RBP20.8■□□□□ 0.92
ATPAF2-201ENST00000444058 MSLNLQ96KJ4 702 aa20.8■□□□□ 0.92
ATPAF2-201ENST00000444058 PRKAG3Q9UGI9 489 aa20.8■□□□□ 0.92
ATPAF2-201ENST00000444058 KCNG1Q9UIX4 513 aa20.8■□□□□ 0.92
ATPAF2-201ENST00000444058 IRAK3Q9Y616 596 aa20.8■□□□□ 0.92
ATPAF2-201ENST00000444058 PHLPP2Q6ZVD8 1323 aa20.79■□□□□ 0.92
ATPAF2-201ENST00000444058 ARL5CA6NH57 179 aa20.79■□□□□ 0.92
ATPAF2-201ENST00000444058 NT5C1B-RDH14C9J2C7 533 aa20.79■□□□□ 0.92
ATPAF2-201ENST00000444058 K7ELQ4 463 aaPredicted RBP20.79■□□□□ 0.92
ATPAF2-201ENST00000444058 ALDH2P05091 517 aa20.79■□□□□ 0.92
ATPAF2-201ENST00000444058 IL9P15248 144 aa20.79■□□□□ 0.92
ATPAF2-201ENST00000444058 AFF1P51825 1210 aaKnown RBP20.79■□□□□ 0.92
ATPAF2-201ENST00000444058 SMAD4Q13485 552 aaKnown RBP20.79■□□□□ 0.92
ATPAF2-201ENST00000444058 PRPF4BQ13523 1007 aaKnown RBP20.79■□□□□ 0.92
ATPAF2-201ENST00000444058 GIT2Q14161 759 aa20.79■□□□□ 0.92
ATPAF2-201ENST00000444058 SMC1AQ14683 1233 aaKnown RBP20.79■□□□□ 0.92
ATPAF2-201ENST00000444058 SMAD2Q15796 467 aaKnown RBP20.79■□□□□ 0.92
ATPAF2-201ENST00000444058 RINT1Q6NUQ1 792 aa20.79■□□□□ 0.92
ATPAF2-201ENST00000444058 C1orf186Q6ZWK4 172 aa20.79■□□□□ 0.92
ATPAF2-201ENST00000444058 DRC1Q96MC2 740 aa20.79■□□□□ 0.92
ATPAF2-201ENST00000444058 FAM193BQ96PV7 902 aaPredicted RBP20.79■□□□□ 0.92
ATPAF2-201ENST00000444058 GAD1Q99259 594 aa20.79■□□□□ 0.92
ATPAF2-201ENST00000444058 RNF39Q9H2S5 420 aa20.79■□□□□ 0.92
ATPAF2-201ENST00000444058 KCND2Q9NZV8 630 aa20.79■□□□□ 0.92
ATPAF2-201ENST00000444058 CLEC1BQ9P126 229 aa20.79■□□□□ 0.92
ATPAF2-201ENST00000444058 DNAJB4Q9UDY4 337 aa20.79■□□□□ 0.92
ATPAF2-201ENST00000444058 CD207Q9UJ71 328 aa20.79■□□□□ 0.92
ATPAF2-201ENST00000444058 VPS37CA5D8V6 355 aaPredicted RBP20.78■□□□□ 0.92
ATPAF2-201ENST00000444058 N4BP3O15049 544 aa20.78■□□□□ 0.92
ATPAF2-201ENST00000444058 DDHD2O94830 711 aa20.78■□□□□ 0.92
ATPAF2-201ENST00000444058 GLP2RO95838 553 aa20.78■□□□□ 0.92
ATPAF2-201ENST00000444058 SRGAP2BP0DMP2 458 aa20.78■□□□□ 0.92
ATPAF2-201ENST00000444058 SYT1P21579 422 aa20.78■□□□□ 0.92
ATPAF2-201ENST00000444058 GUCY2CP25092 1073 aa20.78■□□□□ 0.92
ATPAF2-201ENST00000444058 SLC11A1P49279 550 aa20.78■□□□□ 0.92
ATPAF2-201ENST00000444058 KCNC3Q14003 757 aa20.78■□□□□ 0.92
ATPAF2-201ENST00000444058 PLPP4Q5VZY2 271 aa20.78■□□□□ 0.92
ATPAF2-201ENST00000444058 KCNK18Q7Z418 384 aa20.78■□□□□ 0.92
ATPAF2-201ENST00000444058 TMEM173Q86WV6 379 aaPredicted RBP20.78■□□□□ 0.92
ATPAF2-201ENST00000444058 SNX21Q969T3 373 aa20.78■□□□□ 0.92
ATPAF2-201ENST00000444058 PNMA5Q96PV4 448 aa20.78■□□□□ 0.92
ATPAF2-201ENST00000444058 NXF3Q9H4D5 531 aaKnown RBP20.78■□□□□ 0.92
ATPAF2-201ENST00000444058 HES2Q9Y543 173 aa20.78■□□□□ 0.92
ATPAF2-201ENST00000444058 C2orf71A6NGG8 1288 aa20.77■□□□□ 0.92
ATPAF2-201ENST00000444058 HIDE1A8MVS5 230 aa20.77■□□□□ 0.92
ATPAF2-201ENST00000444058 PER2O15055 1255 aa20.77■□□□□ 0.92
ATPAF2-201ENST00000444058 MBTPS2O43462 519 aa20.77■□□□□ 0.92
ATPAF2-201ENST00000444058 B4GALT3O60512 393 aa20.77■□□□□ 0.92
ATPAF2-201ENST00000444058 NPTXRO95502 500 aa20.77■□□□□ 0.92
ATPAF2-201ENST00000444058 POMCP01189 267 aa20.77■□□□□ 0.92
ATPAF2-201ENST00000444058 PRKCBP05771 671 aa20.77■□□□□ 0.92
ATPAF2-201ENST00000444058 MLH1P40692 756 aa20.77■□□□□ 0.92
ATPAF2-201ENST00000444058 DSC1Q08554 894 aa20.77■□□□□ 0.92
ATPAF2-201ENST00000444058 DMP1Q13316 513 aaPredicted RBP20.77■□□□□ 0.92
ATPAF2-201ENST00000444058 COLGALT2Q8IYK4 626 aa20.77■□□□□ 0.92
ATPAF2-201ENST00000444058 VPS52Q8N1B4 723 aa20.77■□□□□ 0.92
ATPAF2-201ENST00000444058 SYT2Q8N9I0 419 aaPredicted RBP20.77■□□□□ 0.92
ATPAF2-201ENST00000444058 SMRP1Q8NCR6 262 aa20.77■□□□□ 0.92
ATPAF2-201ENST00000444058 CDK5RAP3Q96JB5 506 aa20.77■□□□□ 0.92
ATPAF2-201ENST00000444058 NTPCRQ9BSD7 190 aaKnown RBP20.77■□□□□ 0.92
ATPAF2-201ENST00000444058 RUSC1Q9BVN2 902 aa20.77■□□□□ 0.92
ATPAF2-201ENST00000444058 GBP3Q9H0R5 595 aa20.77■□□□□ 0.92
ATPAF2-201ENST00000444058 ZBP1Q9H171 429 aa20.77■□□□□ 0.92
ATPAF2-201ENST00000444058 PDZD7Q9H5P4 517 aa20.77■□□□□ 0.92
ATPAF2-201ENST00000444058 FAN1Q9Y2M0 1017 aa20.77■□□□□ 0.92
ATPAF2-201ENST00000444058 RBM19Q9Y4C8 960 aaKnown RBP20.77■□□□□ 0.92
ATPAF2-201ENST00000444058 K7ERI5 159 aa20.76■□□□□ 0.91
ATPAF2-201ENST00000444058 HIP1RO75146 1068 aa20.76■□□□□ 0.91
ATPAF2-201ENST00000444058 CTSAP10619 480 aa20.76■□□□□ 0.91
ATPAF2-201ENST00000444058 LONP1P36776 959 aaKnown RBP20.76■□□□□ 0.91
ATPAF2-201ENST00000444058 NPTX2P47972 431 aa20.76■□□□□ 0.91
ATPAF2-201ENST00000444058 SF3A1Q15459 793 aaKnown RBP20.76■□□□□ 0.91
ATPAF2-201ENST00000444058 TMEM119Q4V9L6 283 aa20.76■□□□□ 0.91
ATPAF2-201ENST00000444058 CDR2LQ86X02 465 aaPredicted RBP20.76■□□□□ 0.91
ATPAF2-201ENST00000444058 DAW1Q8N136 415 aa20.76■□□□□ 0.91
ATPAF2-201ENST00000444058 GJD3Q8N144 294 aa20.76■□□□□ 0.91
ATPAF2-201ENST00000444058 GSTCDQ8NEC7 633 aa20.76■□□□□ 0.91
ATPAF2-201ENST00000444058 ADPGKQ9BRR6 497 aa20.76■□□□□ 0.91
ATPAF2-201ENST00000444058 TMEM134Q9H6X4 195 aa20.76■□□□□ 0.91
ATPAF2-201ENST00000444058 TTLL13PA6NNM8 815 aa20.75■□□□□ 0.91
ATPAF2-201ENST00000444058 NRP1O14786 923 aa20.75■□□□□ 0.91
ATPAF2-201ENST00000444058 NR1I2O75469 434 aa20.75■□□□□ 0.91
ATPAF2-201ENST00000444058 UBA7P41226 1012 aa20.75■□□□□ 0.91
ATPAF2-201ENST00000444058 PEX3P56589 373 aa20.75■□□□□ 0.91
ATPAF2-201ENST00000444058 MAPK7Q13164 816 aa20.75■□□□□ 0.91
ATPAF2-201ENST00000444058 ZRSR1Q15695 479 aaKnown RBP20.75■□□□□ 0.91
ATPAF2-201ENST00000444058 APBB1IPQ7Z5R6 666 aaPredicted RBP20.75■□□□□ 0.91
ATPAF2-201ENST00000444058 CABP7Q86V35 215 aa20.75■□□□□ 0.91
ATPAF2-201ENST00000444058 VN1R2Q8NFZ6 395 aa20.75■□□□□ 0.91
ATPAF2-201ENST00000444058 BCL7CQ8WUZ0 217 aaPredicted RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms