RNA–Protein interactions for RNA: ENST00000443438.5

RER1-205, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 540 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-205ENST00000443438 ABLIM1O14639 778 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 EXTL3O43909 919 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 TADA3O75528 432 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 GH1P01241 217 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 IGHA2P01877 340 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 PNMA6AP0CW24 399 aaPredicted RBP9.31□□□□□ -0.92
RER1-205ENST00000443438 FERP16591 822 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 SMPD1P17405 629 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 ANXA13P27216 316 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 MARK3P27448 753 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 MAPK4P31152 587 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 GTF2H1P32780 548 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 SOX5P35711 763 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 ADCYAP1R1P41586 468 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 STAT1P42224 750 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 WNT7BP56706 349 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 KIF5AQ12840 1032 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 DRAP1Q14919 205 aaPredicted RBP9.31□□□□□ -0.92
RER1-205ENST00000443438 ARHGEF19Q8IW93 802 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 GPD1LQ8N335 351 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 DEPTORQ8TB45 409 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 PSPC1Q8WXF1 523 aaKnown RBP9.31□□□□□ -0.92
RER1-205ENST00000443438 POMGNT1Q8WZA1 660 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 ZNF516Q92618 1163 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 USP6NLQ92738 828 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 GLG1Q92896 1179 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 ZBTB45Q96K62 511 aaPredicted RBP9.31□□□□□ -0.92
RER1-205ENST00000443438 POP1Q99575 1024 aaKnown RBP9.31□□□□□ -0.92
RER1-205ENST00000443438 NAPGQ99747 312 aaPredicted RBP9.31□□□□□ -0.92
RER1-205ENST00000443438 C16orf70Q9BSU1 422 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 TARS2Q9BW92 718 aaKnown RBP9.31□□□□□ -0.92
RER1-205ENST00000443438 CARD6Q9BX69 1037 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 IFIH1Q9BYX4 1025 aaKnown RBP9.31□□□□□ -0.92
RER1-205ENST00000443438 TSGA10Q9BZW7 698 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 RNPEPQ9H4A4 650 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 ZCCHC17Q9NP64 241 aaKnown RBP9.31□□□□□ -0.92
RER1-205ENST00000443438 TOPORSQ9NS56 1045 aaPredicted RBP9.31□□□□□ -0.92
RER1-205ENST00000443438 APEX2Q9UBZ4 518 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 CPA4Q9UI42 421 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 CDC23Q9UJX2 597 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 BZW2Q9Y6E2 419 aaKnown RBP9.31□□□□□ -0.92
RER1-205ENST00000443438 ZNF236Q9UL36 1845 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 PASKQ96RG2 1323 aa9.31□□□□□ -0.92
RER1-205ENST00000443438 A0A0B4J269 797 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 CTAGE9A4FU28 777 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 MANSC4A6NHS7 340 aaPredicted RBP9.3□□□□□ -0.92
RER1-205ENST00000443438 LRRIQ4A6NIV6 560 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 K7ERI5 159 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 FOXN3O00409 490 aaPredicted RBP9.3□□□□□ -0.92
RER1-205ENST00000443438 DDX3XO00571 662 aaKnown RBP eCLIP9.3□□□□□ -0.921e-6■□□□□ 10.3
RER1-205ENST00000443438 HNRNPDLO14979 420 aaKnown RBP9.3□□□□□ -0.92
RER1-205ENST00000443438 KIAA0391O15091 583 aaKnown RBP9.3□□□□□ -0.92
RER1-205ENST00000443438 ADCY6O43306 1168 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 KRT86O43790 486 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 GAS2O43903 313 aaKnown RBP9.3□□□□□ -0.92
RER1-205ENST00000443438 FAM189A1O60320 539 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 HBP1O60381 514 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 MSCO60682 206 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 GFPT2O94808 682 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 C22orf31O95567 290 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 ATP1A1P05023 1023 aaKnown RBP9.3□□□□□ -0.92
RER1-205ENST00000443438 LGALS2P05162 132 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 RFX1P22670 979 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 LIG4P49917 911 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 GPC3P51654 580 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 NLRP11P59045 1033 aaKnown RBP9.3□□□□□ -0.92
RER1-205ENST00000443438 ARID5AQ03989 594 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 LAMTOR4Q0VGL1 99 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 TUBB2AQ13885 445 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 KIF22Q14807 665 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 PSMD6Q15008 389 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 TDRD12Q587J7 1177 aaKnown RBP9.3□□□□□ -0.92
RER1-205ENST00000443438 ZNF484Q5JVG2 852 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 ZBTB41Q5SVQ8 909 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 PAPD7Q5XG87 772 aaKnown RBP9.3□□□□□ -0.92
RER1-205ENST00000443438 C17orf99Q6UX52 265 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 RSRC2Q7L4I2 434 aaKnown RBP9.3□□□□□ -0.92
RER1-205ENST00000443438 TRAPPC11Q7Z392 1133 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 EXOC8Q8IYI6 725 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 MSL3Q8N5Y2 521 aaKnown RBP9.3□□□□□ -0.92
RER1-205ENST00000443438 PPTC7Q8NI37 304 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 LNX1Q8TBB1 728 aaPredicted RBP9.3□□□□□ -0.92
RER1-205ENST00000443438 AFG1LQ8WV93 481 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 TRAPPC12Q8WVT3 735 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 TCP11Q8WWU5 503 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 ZBTB10Q96DT7 871 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 KREMEN1Q96MU8 473 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 SPAG5Q96R06 1193 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 FAM213AQ9BRX8 229 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 TINF2Q9BSI4 451 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 TUBB2BQ9BVA1 445 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 DEF6Q9H4E7 631 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 TMEM8AQ9HCN3 771 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 ADAMTS1Q9UHI8 967 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 IVNS1ABPQ9Y6Y0 642 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 MYH9P35579 1960 aaKnown RBP9.3□□□□□ -0.92
RER1-205ENST00000443438 ATP8B3O60423 1300 aa9.3□□□□□ -0.92
RER1-205ENST00000443438 ZNF233A6NK53 670 aa9.29□□□□□ -0.92
RER1-205ENST00000443438 BTNL10A8MVZ5 291 aa9.29□□□□□ -0.92
RER1-205ENST00000443438 FAM155AB1AL88 458 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms