RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 SMG8Q8ND04 991 aaKnown RBP13.83□□□□□ -0.2
CDCA4P3-201ENST00000442572 PPM1EQ8WY54 764 aa13.83□□□□□ -0.2
CDCA4P3-201ENST00000442572 LARP4BQ92615 738 aaKnown RBP13.83□□□□□ -0.2
CDCA4P3-201ENST00000442572 RAD54LQ92698 747 aa13.83□□□□□ -0.2
CDCA4P3-201ENST00000442572 CPB2Q96IY4 423 aa13.83□□□□□ -0.2
CDCA4P3-201ENST00000442572 KMT5AQ9NQR1 393 aa13.83□□□□□ -0.2
CDCA4P3-201ENST00000442572 BLOC1S4Q9NUP1 217 aa13.83□□□□□ -0.2
CDCA4P3-201ENST00000442572 SPG21Q9NZD8 308 aa13.83□□□□□ -0.2
CDCA4P3-201ENST00000442572 ARHGAP28Q9P2N2 729 aa13.83□□□□□ -0.2
CDCA4P3-201ENST00000442572 PUF60Q9UHX1 559 aaKnown RBP13.83□□□□□ -0.2
CDCA4P3-201ENST00000442572 CFAP45Q9UL16 551 aa13.83□□□□□ -0.2
CDCA4P3-201ENST00000442572 PDCD11Q14690 1871 aaKnown RBP13.82□□□□□ -0.2
CDCA4P3-201ENST00000442572 SPTLC2O15270 562 aa13.82□□□□□ -0.2
CDCA4P3-201ENST00000442572 FGF18O76093 207 aa13.82□□□□□ -0.2
CDCA4P3-201ENST00000442572 ALDH7A1P49419 539 aaKnown RBP13.82□□□□□ -0.2
CDCA4P3-201ENST00000442572 CEBPZQ03701 1054 aaKnown RBP13.82□□□□□ -0.2
CDCA4P3-201ENST00000442572 KRT17Q04695 432 aa13.82□□□□□ -0.2
CDCA4P3-201ENST00000442572 RNASELQ05823 741 aaKnown RBP13.82□□□□□ -0.2
CDCA4P3-201ENST00000442572 KARSQ15046 597 aaKnown RBP13.82□□□□□ -0.2
CDCA4P3-201ENST00000442572 DCAF4L1Q3SXM0 396 aa13.82□□□□□ -0.2
CDCA4P3-201ENST00000442572 CCDC73Q6ZRK6 1079 aa13.82□□□□□ -0.2
CDCA4P3-201ENST00000442572 THNSL1Q8IYQ7 743 aa13.82□□□□□ -0.2
CDCA4P3-201ENST00000442572 KCNG4Q8TDN1 519 aa13.82□□□□□ -0.2
CDCA4P3-201ENST00000442572 POF1BQ8WVV4 589 aa13.82□□□□□ -0.2
CDCA4P3-201ENST00000442572 SYMPKQ92797 1274 aaKnown RBP13.82□□□□□ -0.2
CDCA4P3-201ENST00000442572 LPPQ93052 612 aa13.82□□□□□ -0.2
CDCA4P3-201ENST00000442572 PLIN2Q99541 437 aa13.82□□□□□ -0.2
CDCA4P3-201ENST00000442572 EIF2AQ9BY44 585 aaKnown RBP13.82□□□□□ -0.2
CDCA4P3-201ENST00000442572 ALG13Q9NP73 1137 aaKnown RBP13.82□□□□□ -0.2
CDCA4P3-201ENST00000442572 TBC1D13Q9NVG8 400 aa13.82□□□□□ -0.2
CDCA4P3-201ENST00000442572 CCDC169A6NNP5 214 aa13.81□□□□□ -0.2
CDCA4P3-201ENST00000442572 B4GALT5O43286 388 aa13.81□□□□□ -0.2
CDCA4P3-201ENST00000442572 MRPS5P82675 430 aaKnown RBP13.81□□□□□ -0.2
CDCA4P3-201ENST00000442572 BMS1Q14692 1282 aaKnown RBP13.81□□□□□ -0.2
CDCA4P3-201ENST00000442572 COL19A1Q14993 1142 aa13.81□□□□□ -0.2
CDCA4P3-201ENST00000442572 SKIV2LQ15477 1246 aaKnown RBP13.81□□□□□ -0.2
CDCA4P3-201ENST00000442572 ARSHQ5FYA8 562 aa13.81□□□□□ -0.2
CDCA4P3-201ENST00000442572 RRAGBQ5VZM2 374 aa13.81□□□□□ -0.2
CDCA4P3-201ENST00000442572 GPBP1Q86WP2 473 aa13.81□□□□□ -0.2
CDCA4P3-201ENST00000442572 MRPS27Q92552 414 aaKnown RBP13.81□□□□□ -0.2
CDCA4P3-201ENST00000442572 HLA-CQ95604 372 aa13.81□□□□□ -0.2
CDCA4P3-201ENST00000442572 EPSTI1Q96J88 318 aa13.81□□□□□ -0.2
CDCA4P3-201ENST00000442572 TMEM175Q9BSA9 504 aa13.81□□□□□ -0.2
CDCA4P3-201ENST00000442572 MRPL4Q9BYD3 311 aaKnown RBP13.81□□□□□ -0.2
CDCA4P3-201ENST00000442572 PDZD7Q9H5P4 517 aa13.81□□□□□ -0.2
CDCA4P3-201ENST00000442572 TLR9Q9NR96 1032 aa13.81□□□□□ -0.2
CDCA4P3-201ENST00000442572 TNFSF13BQ9Y275 285 aa13.81□□□□□ -0.2
CDCA4P3-201ENST00000442572 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.8□□□□□ -0.2
CDCA4P3-201ENST00000442572 MEIS3P2A8K0S8 358 aa13.8□□□□□ -0.2
CDCA4P3-201ENST00000442572 CUTAO60888 179 aa13.8□□□□□ -0.2
CDCA4P3-201ENST00000442572 NPTXRO95502 500 aa13.8□□□□□ -0.2
CDCA4P3-201ENST00000442572 ZNF131P52739 623 aa13.8□□□□□ -0.2
CDCA4P3-201ENST00000442572 BCAR1P56945 870 aa13.8□□□□□ -0.2
CDCA4P3-201ENST00000442572 CAMK1Q14012 370 aa13.8□□□□□ -0.2
CDCA4P3-201ENST00000442572 TMEM132AQ24JP5 1023 aa13.8□□□□□ -0.2
CDCA4P3-201ENST00000442572 SLC39A11Q8N1S5 342 aa13.8□□□□□ -0.2
CDCA4P3-201ENST00000442572 TMEM169Q96HH4 297 aa13.8□□□□□ -0.2
CDCA4P3-201ENST00000442572 CLIC6Q96NY7 704 aa13.8□□□□□ -0.2
CDCA4P3-201ENST00000442572 FAM193BQ96PV7 902 aaPredicted RBP13.8□□□□□ -0.2
CDCA4P3-201ENST00000442572 NRDE2Q9H7Z3 1164 aa13.8□□□□□ -0.2
CDCA4P3-201ENST00000442572 PARVGQ9HBI0 331 aa13.8□□□□□ -0.2
CDCA4P3-201ENST00000442572 NGRNQ9NPE2 291 aaKnown RBP13.8□□□□□ -0.2
CDCA4P3-201ENST00000442572 INPP5FQ9Y2H2 1132 aa13.8□□□□□ -0.2
CDCA4P3-201ENST00000442572 ATP6V1DQ9Y5K8 247 aa13.8□□□□□ -0.2
CDCA4P3-201ENST00000442572 ARL5CA6NH57 179 aa13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 ZC3H11AO75152 810 aaKnown RBP eCLIP13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 NR1I2O75469 434 aa13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 FAM13AO94988 1023 aa13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 BRD1O95696 1058 aa13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 ALDH2P05091 517 aa13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 KRT18P05783 430 aaKnown RBP13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 DNAJB1P25685 340 aa13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 NCKAP1LP55160 1127 aa13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 GRIK3Q13003 919 aa13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 STRN3Q13033 797 aa13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 GIT2Q14161 759 aa13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 MCM6Q14566 821 aa13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 ATF7IP2Q5U623 682 aa13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 ZPBP2Q6X784 338 aa13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 USP49Q70CQ1 688 aa13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 SV2BQ7L1I2 683 aa13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 TMEM161BQ8NDZ6 487 aa13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 PABPC5Q96DU9 382 aaKnown RBP13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 ACO2Q99798 780 aaKnown RBP13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 REEP2Q9BRK0 252 aa13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 KIFC3Q9BVG8 833 aa13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 LRRC27Q9C0I9 530 aa13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 CUEDC2Q9H467 287 aa13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 NXF3Q9H4D5 531 aaKnown RBP13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 POLD4Q9HCU8 107 aa13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 TFIP11Q9UBB9 837 aaKnown RBP13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 HCSTQ9UBK5 93 aa13.79□□□□□ -0.2
CDCA4P3-201ENST00000442572 EYSQ5T1H1 3165 aa13.78□□□□□ -0.2
CDCA4P3-201ENST00000442572 SFI1A8K8P3 1242 aa13.78□□□□□ -0.2
CDCA4P3-201ENST00000442572 SLC16A4O15374 487 aa13.78□□□□□ -0.2
CDCA4P3-201ENST00000442572 TBCAO75347 108 aaKnown RBP13.78□□□□□ -0.2
CDCA4P3-201ENST00000442572 GALTP07902 379 aa13.78□□□□□ -0.2
CDCA4P3-201ENST00000442572 MAPTP10636 758 aaKnown RBP13.78□□□□□ -0.2
CDCA4P3-201ENST00000442572 STAT6P42226 847 aa13.78□□□□□ -0.2
CDCA4P3-201ENST00000442572 DSC1Q08554 894 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms