RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 UBXN11Q5T124 520 aa13.07□□□□□ -0.32
TTC28-203ENST00000442232 KIAA1841Q6NSI8 718 aa13.07□□□□□ -0.32
TTC28-203ENST00000442232 ZNF280BQ86YH2 543 aa13.07□□□□□ -0.32
TTC28-203ENST00000442232 IFNLR1Q8IU57 520 aaPredicted RBP13.07□□□□□ -0.32
TTC28-203ENST00000442232 CCDC83Q8IWF9 413 aa13.07□□□□□ -0.32
TTC28-203ENST00000442232 ZBTB8OSQ8IWT0 167 aa13.07□□□□□ -0.32
TTC28-203ENST00000442232 FAM184AQ8NB25 1140 aa13.07□□□□□ -0.32
TTC28-203ENST00000442232 MCPH1Q8NEM0 835 aa13.07□□□□□ -0.32
TTC28-203ENST00000442232 ASAP3Q8TDY4 903 aa13.07□□□□□ -0.32
TTC28-203ENST00000442232 PIGOQ8TEQ8 1089 aa13.07□□□□□ -0.32
TTC28-203ENST00000442232 BCL7CQ8WUZ0 217 aaPredicted RBP13.07□□□□□ -0.32
TTC28-203ENST00000442232 LLPHQ9BRT6 129 aaKnown RBP13.07□□□□□ -0.32
TTC28-203ENST00000442232 CSRNP2Q9H175 543 aa13.07□□□□□ -0.32
TTC28-203ENST00000442232 SFXN1Q9H9B4 322 aa13.07□□□□□ -0.32
TTC28-203ENST00000442232 TUFT1Q9NNX1 390 aa13.07□□□□□ -0.32
TTC28-203ENST00000442232 MRPL17Q9NRX2 175 aaKnown RBP13.07□□□□□ -0.32
TTC28-203ENST00000442232 DBR1Q9UK59 544 aaKnown RBP13.07□□□□□ -0.32
TTC28-203ENST00000442232 NOL7Q9UMY1 257 aaKnown RBP13.07□□□□□ -0.32
TTC28-203ENST00000442232 PRG3Q9Y2Y8 225 aaPredicted RBP13.07□□□□□ -0.32
TTC28-203ENST00000442232 ZNF318Q5VUA4 2279 aa13.06□□□□□ -0.32
TTC28-203ENST00000442232 NRP1O14786 923 aa13.06□□□□□ -0.32
TTC28-203ENST00000442232 DDHD2O94830 711 aa13.06□□□□□ -0.32
TTC28-203ENST00000442232 XRCC6P12956 609 aaKnown RBP eCLIP13.06□□□□□ -0.32
TTC28-203ENST00000442232 EPCAMP16422 314 aa13.06□□□□□ -0.32
TTC28-203ENST00000442232 RARRES1P49788 294 aa13.06□□□□□ -0.32
TTC28-203ENST00000442232 MBTD1Q05BQ5 628 aa13.06□□□□□ -0.32
TTC28-203ENST00000442232 HAUS3Q68CZ6 603 aa13.06□□□□□ -0.32
TTC28-203ENST00000442232 SLC27A1Q6PCB7 646 aa13.06□□□□□ -0.32
TTC28-203ENST00000442232 BMP8AQ7Z5Y6 402 aa13.06□□□□□ -0.32
TTC28-203ENST00000442232 SMG8Q8ND04 991 aaKnown RBP13.06□□□□□ -0.32
TTC28-203ENST00000442232 ZSCAN31Q96LW9 406 aaPredicted RBP13.06□□□□□ -0.32
TTC28-203ENST00000442232 MTMR9Q96QG7 549 aa13.06□□□□□ -0.32
TTC28-203ENST00000442232 NACC1Q96RE7 527 aa13.06□□□□□ -0.32
TTC28-203ENST00000442232 RPS6KC1Q96S38 1066 aa13.06□□□□□ -0.32
TTC28-203ENST00000442232 PRRX2Q99811 253 aa13.06□□□□□ -0.32
TTC28-203ENST00000442232 HERC2P3Q9BVR0 1158 aa13.06□□□□□ -0.32
TTC28-203ENST00000442232 EIF2AQ9BY44 585 aaKnown RBP13.06□□□□□ -0.32
TTC28-203ENST00000442232 NFKBIZQ9BYH8 718 aa13.06□□□□□ -0.32
TTC28-203ENST00000442232 POMKQ9H5K3 350 aa13.06□□□□□ -0.32
TTC28-203ENST00000442232 PRMT7Q9NVM4 692 aaPredicted RBP13.06□□□□□ -0.32
TTC28-203ENST00000442232 DPP7Q9UHL4 492 aa13.06□□□□□ -0.32
TTC28-203ENST00000442232 GIT1Q9Y2X7 761 aa13.06□□□□□ -0.32
TTC28-203ENST00000442232 ARHGEF35A5YM69 484 aa13.05□□□□□ -0.32
TTC28-203ENST00000442232 ARL5CA6NH57 179 aa13.05□□□□□ -0.32
TTC28-203ENST00000442232 C2CD2LO14523 706 aa13.05□□□□□ -0.32
TTC28-203ENST00000442232 NPTXRO95502 500 aa13.05□□□□□ -0.32
TTC28-203ENST00000442232 SOD2P04179 222 aa13.05□□□□□ -0.32
TTC28-203ENST00000442232 CENPBP07199 599 aaPredicted RBP13.05□□□□□ -0.32
TTC28-203ENST00000442232 ADH1AP07327 375 aa13.05□□□□□ -0.32
TTC28-203ENST00000442232 OR52Z1P0C646 297 aa13.05□□□□□ -0.32
TTC28-203ENST00000442232 GLRA2P23416 452 aa13.05□□□□□ -0.32
TTC28-203ENST00000442232 ARL2P36404 184 aa13.05□□□□□ -0.32
TTC28-203ENST00000442232 SCNN1GP51170 649 aa13.05□□□□□ -0.32
TTC28-203ENST00000442232 MTMR3Q13615 1198 aa13.05□□□□□ -0.32
TTC28-203ENST00000442232 MAEAQ7L5Y9 396 aa13.05□□□□□ -0.32
TTC28-203ENST00000442232 FBXL6Q8N531 539 aa13.05□□□□□ -0.32
TTC28-203ENST00000442232 ACSF2Q96CM8 615 aaPredicted RBP13.05□□□□□ -0.32
TTC28-203ENST00000442232 PRIMPOLQ96LW4 560 aa13.05□□□□□ -0.32
TTC28-203ENST00000442232 FBXL18Q96ME1 805 aa13.05□□□□□ -0.32
TTC28-203ENST00000442232 GAD1Q99259 594 aa13.05□□□□□ -0.32
TTC28-203ENST00000442232 COLEC11Q9BWP8 271 aa13.05□□□□□ -0.32
TTC28-203ENST00000442232 C2orf40Q9H1Z8 148 aa13.05□□□□□ -0.32
TTC28-203ENST00000442232 FOXP1Q9H334 677 aaPredicted RBP13.05□□□□□ -0.32
TTC28-203ENST00000442232 SH2B1Q9NRF2 756 aaPredicted RBP13.05□□□□□ -0.32
TTC28-203ENST00000442232 DENND4AQ7Z401 1863 aa13.05□□□□□ -0.32
TTC28-203ENST00000442232 ZMYM2Q9UBW7 1377 aa13.05□□□□□ -0.32
TTC28-203ENST00000442232 KMT2EQ8IZD2 1858 aa13.04□□□□□ -0.32
TTC28-203ENST00000442232 C2CD4DB7Z1M9 353 aa13.04□□□□□ -0.32
TTC28-203ENST00000442232 WNT7AO00755 349 aa13.04□□□□□ -0.32
TTC28-203ENST00000442232 INPPL1O15357 1258 aa13.04□□□□□ -0.32
TTC28-203ENST00000442232 B4GALT3O60512 393 aa13.04□□□□□ -0.32
TTC28-203ENST00000442232 WEE2P0C1S8 567 aa13.04□□□□□ -0.32
TTC28-203ENST00000442232 ARF4P18085 180 aaPredicted RBP13.04□□□□□ -0.32
TTC28-203ENST00000442232 GLUD2P49448 558 aa13.04□□□□□ -0.32
TTC28-203ENST00000442232 RBM25P49756 843 aaKnown RBP13.04□□□□□ -0.32
TTC28-203ENST00000442232 ZNF174Q15697 407 aa13.04□□□□□ -0.32
TTC28-203ENST00000442232 TTC38Q5R3I4 469 aa13.04□□□□□ -0.32
TTC28-203ENST00000442232 CCDC149Q6ZUS6 474 aa13.04□□□□□ -0.32
TTC28-203ENST00000442232 COLGALT2Q8IYK4 626 aa13.04□□□□□ -0.32
TTC28-203ENST00000442232 UBALD2Q8IYN6 164 aa13.04□□□□□ -0.32
TTC28-203ENST00000442232 PLCD3Q8N3E9 789 aa13.04□□□□□ -0.32
TTC28-203ENST00000442232 C12orf76Q8N812 135 aaPredicted RBP13.04□□□□□ -0.32
TTC28-203ENST00000442232 KREMEN2Q8NCW0 462 aa13.04□□□□□ -0.32
TTC28-203ENST00000442232 SLC22A17Q8WUG5 538 aa13.04□□□□□ -0.32
TTC28-203ENST00000442232 KLHL5Q96PQ7 755 aa13.04□□□□□ -0.32
TTC28-203ENST00000442232 POLR3CQ9BUI4 534 aaPredicted RBP13.04□□□□□ -0.32
TTC28-203ENST00000442232 VN1R3Q9BXE9 311 aa13.04□□□□□ -0.32
TTC28-203ENST00000442232 RAB34Q9BZG1 259 aa13.04□□□□□ -0.32
TTC28-203ENST00000442232 TMEM60Q9H2L4 133 aa13.04□□□□□ -0.32
TTC28-203ENST00000442232 NXF3Q9H4D5 531 aaKnown RBP13.04□□□□□ -0.32
TTC28-203ENST00000442232 PARP2Q9UGN5 583 aa13.04□□□□□ -0.32
TTC28-203ENST00000442232 CDH22Q9UJ99 828 aa13.04□□□□□ -0.32
TTC28-203ENST00000442232 SORCS3Q9UPU3 1222 aa13.04□□□□□ -0.32
TTC28-203ENST00000442232 HES2Q9Y543 173 aa13.04□□□□□ -0.32
TTC28-203ENST00000442232 STK24Q9Y6E0 443 aa13.04□□□□□ -0.32
TTC28-203ENST00000442232 TRIOO75962 3097 aa13.04□□□□□ -0.32
TTC28-203ENST00000442232 PLXNA3P51805 1871 aa13.04□□□□□ -0.32
TTC28-203ENST00000442232 C2orf16Q68DN1 1984 aa13.03□□□□□ -0.32
TTC28-203ENST00000442232 N4BP3O15049 544 aa13.03□□□□□ -0.32
TTC28-203ENST00000442232 B4GALT5O43286 388 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms