RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 FAM13BQ9NYF5 915 aa19.86■□□□□ 0.77
CPSF4-205ENST00000440514 LARSQ9P2J5 1176 aaKnown RBP19.86■□□□□ 0.77
CPSF4-205ENST00000440514 K7ENM7 598 aa19.85■□□□□ 0.77
CPSF4-205ENST00000440514 N4BP3O15049 544 aa19.85■□□□□ 0.77
CPSF4-205ENST00000440514 BMPR1AP36894 532 aa19.85■□□□□ 0.77
CPSF4-205ENST00000440514 NCKAP1LP55160 1127 aa19.85■□□□□ 0.77
CPSF4-205ENST00000440514 TPRNQ4KMQ1 711 aa19.85■□□□□ 0.77
CPSF4-205ENST00000440514 SPOUT1Q5T280 376 aaKnown RBP19.85■□□□□ 0.77
CPSF4-205ENST00000440514 GLB1LQ6UWU2 654 aa19.85■□□□□ 0.77
CPSF4-205ENST00000440514 LRRC55Q6ZSA7 311 aa19.85■□□□□ 0.77
CPSF4-205ENST00000440514 DDX12PQ92771 950 aa19.85■□□□□ 0.77
CPSF4-205ENST00000440514 RNF39Q9H2S5 420 aa19.85■□□□□ 0.77
CPSF4-205ENST00000440514 TMEM134Q9H6X4 195 aa19.85■□□□□ 0.77
CPSF4-205ENST00000440514 CWH43Q9H720 699 aa19.85■□□□□ 0.77
CPSF4-205ENST00000440514 RSAD1Q9HA92 442 aa19.85■□□□□ 0.77
CPSF4-205ENST00000440514 RWDD3Q9Y3V2 267 aa19.85■□□□□ 0.77
CPSF4-205ENST00000440514 MYO9BQ13459 2157 aa19.85■□□□□ 0.77
CPSF4-205ENST00000440514 MAPTP10636 758 aaKnown RBP19.84■□□□□ 0.77
CPSF4-205ENST00000440514 ITGA4P13612 1032 aa19.84■□□□□ 0.77
CPSF4-205ENST00000440514 SMTNP53814 917 aa19.84■□□□□ 0.77
CPSF4-205ENST00000440514 ATF7IP2Q5U623 682 aa19.84■□□□□ 0.77
CPSF4-205ENST00000440514 SFR1Q86XK3 245 aa19.84■□□□□ 0.77
CPSF4-205ENST00000440514 DNAJC19Q96DA6 116 aa19.84■□□□□ 0.77
CPSF4-205ENST00000440514 NTPCRQ9BSD7 190 aaKnown RBP19.84■□□□□ 0.77
CPSF4-205ENST00000440514 SCAND2PQ9GZW5 306 aaPredicted RBP19.84■□□□□ 0.77
CPSF4-205ENST00000440514 RBM19Q9Y4C8 960 aaKnown RBP19.84■□□□□ 0.77
CPSF4-205ENST00000440514 ATG2AQ2TAZ0 1938 aa19.84■□□□□ 0.77
CPSF4-205ENST00000440514 C5orf67F2Z3F1 127 aa19.83■□□□□ 0.77
CPSF4-205ENST00000440514 POLR2DO15514 142 aaKnown RBP19.83■□□□□ 0.77
CPSF4-205ENST00000440514 OFD1O75665 1012 aa19.83■□□□□ 0.77
CPSF4-205ENST00000440514 PFKFB1P16118 471 aa19.83■□□□□ 0.77
CPSF4-205ENST00000440514 PBX3P40426 434 aa19.83■□□□□ 0.77
CPSF4-205ENST00000440514 GPM6BQ13491 265 aa19.83■□□□□ 0.77
CPSF4-205ENST00000440514 NOMO2Q5JPE7 1267 aa19.83■□□□□ 0.77
CPSF4-205ENST00000440514 HAUS6Q7Z4H7 955 aa19.83■□□□□ 0.77
CPSF4-205ENST00000440514 COLGALT1Q8NBJ5 622 aa19.83■□□□□ 0.77
CPSF4-205ENST00000440514 CNNM3Q8NE01 707 aa19.83■□□□□ 0.77
CPSF4-205ENST00000440514 FIZ1Q96SL8 496 aa19.83■□□□□ 0.77
CPSF4-205ENST00000440514 TARS2Q9BW92 718 aaKnown RBP19.83■□□□□ 0.77
CPSF4-205ENST00000440514 MRPL9Q9BYD2 267 aaKnown RBP19.83■□□□□ 0.77
CPSF4-205ENST00000440514 MRPL4Q9BYD3 311 aaKnown RBP19.83■□□□□ 0.77
CPSF4-205ENST00000440514 PLXNA4Q9HCM2 1894 aa19.83■□□□□ 0.76
CPSF4-205ENST00000440514 A0A1B0GVL5 298 aa19.82■□□□□ 0.76
CPSF4-205ENST00000440514 H3BNC9 293 aa19.82■□□□□ 0.76
CPSF4-205ENST00000440514 TRAK2O60296 914 aa19.82■□□□□ 0.76
CPSF4-205ENST00000440514 AKAP5P24588 427 aa19.82■□□□□ 0.76
CPSF4-205ENST00000440514 NMT1P30419 496 aaKnown RBP19.82■□□□□ 0.76
CPSF4-205ENST00000440514 MLH1P40692 756 aa19.82■□□□□ 0.76
CPSF4-205ENST00000440514 AFF1P51825 1210 aaKnown RBP19.82■□□□□ 0.76
CPSF4-205ENST00000440514 STRN3Q13033 797 aa19.82■□□□□ 0.76
CPSF4-205ENST00000440514 ADALQ6DHV7 355 aa19.82■□□□□ 0.76
CPSF4-205ENST00000440514 MICALL1Q8N3F8 863 aa19.82■□□□□ 0.76
CPSF4-205ENST00000440514 IQUBQ8NA54 791 aa19.82■□□□□ 0.76
CPSF4-205ENST00000440514 MAFAQ8NHW3 353 aaPredicted RBP19.82■□□□□ 0.76
CPSF4-205ENST00000440514 ACO2Q99798 780 aaKnown RBP19.82■□□□□ 0.76
CPSF4-205ENST00000440514 ADPGKQ9BRR6 497 aa19.82■□□□□ 0.76
CPSF4-205ENST00000440514 C11orf84Q9BUA3 381 aaPredicted RBP19.82■□□□□ 0.76
CPSF4-205ENST00000440514 TNMDQ9H2S6 317 aa19.82■□□□□ 0.76
CPSF4-205ENST00000440514 CUEDC2Q9H467 287 aa19.82■□□□□ 0.76
CPSF4-205ENST00000440514 TBC1D13Q9NVG8 400 aa19.82■□□□□ 0.76
CPSF4-205ENST00000440514 KCNH3Q9ULD8 1083 aa19.82■□□□□ 0.76
CPSF4-205ENST00000440514 GRM6O15303 877 aa19.81■□□□□ 0.76
CPSF4-205ENST00000440514 B4GALT3O60512 393 aa19.81■□□□□ 0.76
CPSF4-205ENST00000440514 CSPG5O95196 566 aa19.81■□□□□ 0.76
CPSF4-205ENST00000440514 IDEP14735 1019 aa19.81■□□□□ 0.76
CPSF4-205ENST00000440514 LAG3P18627 525 aa19.81■□□□□ 0.76
CPSF4-205ENST00000440514 ZNF568Q3ZCX4 644 aa19.81■□□□□ 0.76
CPSF4-205ENST00000440514 FAM178BQ8IXR5 827 aa19.81■□□□□ 0.76
CPSF4-205ENST00000440514 KLHL23Q8NBE8 558 aa19.81■□□□□ 0.76
CPSF4-205ENST00000440514 URGCPQ8TCY9 931 aa19.81■□□□□ 0.76
CPSF4-205ENST00000440514 ZFP42Q96MM3 310 aa19.81■□□□□ 0.76
CPSF4-205ENST00000440514 GAD1Q99259 594 aa19.81■□□□□ 0.76
CPSF4-205ENST00000440514 CDT1Q9H211 546 aa19.81■□□□□ 0.76
CPSF4-205ENST00000440514 KBTBD4Q9NVX7 518 aa19.81■□□□□ 0.76
CPSF4-205ENST00000440514 PARP2Q9UGN5 583 aa19.81■□□□□ 0.76
CPSF4-205ENST00000440514 KCNG1Q9UIX4 513 aa19.81■□□□□ 0.76
CPSF4-205ENST00000440514 CIZ1Q9ULV3 898 aaPredicted RBP19.81■□□□□ 0.76
CPSF4-205ENST00000440514 TNFSF13BQ9Y275 285 aa19.81■□□□□ 0.76
CPSF4-205ENST00000440514 MTCH2Q9Y6C9 303 aa19.81■□□□□ 0.76
CPSF4-205ENST00000440514 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.8■□□□□ 0.76
CPSF4-205ENST00000440514 ARL5CA6NH57 179 aa19.8■□□□□ 0.76
CPSF4-205ENST00000440514 H0YCG3 227 aa19.8■□□□□ 0.76
CPSF4-205ENST00000440514 GTPBP6O43824 516 aaPredicted RBP19.8■□□□□ 0.76
CPSF4-205ENST00000440514 POMCP01189 267 aa19.8■□□□□ 0.76
CPSF4-205ENST00000440514 ITGB1P05556 798 aa19.8■□□□□ 0.76
CPSF4-205ENST00000440514 RB1P06400 928 aa19.8■□□□□ 0.76
CPSF4-205ENST00000440514 CMA1P23946 247 aa19.8■□□□□ 0.76
CPSF4-205ENST00000440514 DCAF4L1Q3SXM0 396 aa19.8■□□□□ 0.76
CPSF4-205ENST00000440514 ZBTB33Q86T24 672 aa19.8■□□□□ 0.76
CPSF4-205ENST00000440514 HACE1Q8IYU2 909 aa19.8■□□□□ 0.76
CPSF4-205ENST00000440514 PPM1EQ8WY54 764 aa19.8■□□□□ 0.76
CPSF4-205ENST00000440514 PLVAPQ9BX97 442 aa19.8■□□□□ 0.76
CPSF4-205ENST00000440514 GBP3Q9H0R5 595 aa19.8■□□□□ 0.76
CPSF4-205ENST00000440514 GOLPH3LQ9H4A5 285 aa19.8■□□□□ 0.76
CPSF4-205ENST00000440514 ALG13Q9NP73 1137 aaKnown RBP19.8■□□□□ 0.76
CPSF4-205ENST00000440514 SNTG2Q9NY99 539 aa19.8■□□□□ 0.76
CPSF4-205ENST00000440514 KLK14Q9P0G3 267 aa19.8■□□□□ 0.76
CPSF4-205ENST00000440514 TBC1D7Q9P0N9 293 aa19.8■□□□□ 0.76
CPSF4-205ENST00000440514 ANKFY1Q9P2R3 1169 aa19.8■□□□□ 0.76
CPSF4-205ENST00000440514 SERTAD1Q9UHV2 236 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms