RNA–Protein interactions for RNA: ENST00000440223.5

UBE2F-214, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 830 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-214ENST00000440223 THAP9Q9H5L6 903 aa17.58■□□□□ 0.4
UBE2F-214ENST00000440223 TMEM206Q9H813 350 aa17.58■□□□□ 0.4
UBE2F-214ENST00000440223 GPRC5CQ9NQ84 441 aa17.58■□□□□ 0.4
UBE2F-214ENST00000440223 XPNPEP1Q9NQW7 623 aa17.58■□□□□ 0.4
UBE2F-214ENST00000440223 IGKV6-21A0A0C4DH24 114 aa17.57■□□□□ 0.4
UBE2F-214ENST00000440223 CBFA2T2O43439 604 aa17.57■□□□□ 0.4
UBE2F-214ENST00000440223 RPS6KA5O75582 802 aa17.57■□□□□ 0.4
UBE2F-214ENST00000440223 TPM3P06753 285 aa17.57■□□□□ 0.4
UBE2F-214ENST00000440223 TPM2P07951 284 aa17.57■□□□□ 0.4
UBE2F-214ENST00000440223 CD52P31358 61 aa17.57■□□□□ 0.4
UBE2F-214ENST00000440223 PBX2P40425 430 aa17.57■□□□□ 0.4
UBE2F-214ENST00000440223 NCKAP1LP55160 1127 aa17.57■□□□□ 0.4
UBE2F-214ENST00000440223 MKRN4PQ13434 485 aaPredicted RBP17.57■□□□□ 0.4
UBE2F-214ENST00000440223 TFDP1Q14186 410 aa17.57■□□□□ 0.4
UBE2F-214ENST00000440223 MXD4Q14582 209 aaPredicted RBP17.57■□□□□ 0.4
UBE2F-214ENST00000440223 KNOP1Q1ED39 458 aaKnown RBP17.57■□□□□ 0.4
UBE2F-214ENST00000440223 SARM1Q6SZW1 724 aa17.57■□□□□ 0.4
UBE2F-214ENST00000440223 HS2ST1Q7LGA3 356 aa17.57■□□□□ 0.4
UBE2F-214ENST00000440223 ZNF720Q7Z2F6 126 aa17.57■□□□□ 0.4
UBE2F-214ENST00000440223 SYCP3Q8IZU3 236 aa17.57■□□□□ 0.4
UBE2F-214ENST00000440223 CSGALNACT2Q8N6G5 542 aa17.57■□□□□ 0.4
UBE2F-214ENST00000440223 ACCSQ96QU6 501 aa17.57■□□□□ 0.4
UBE2F-214ENST00000440223 OSMRQ99650 979 aa17.57■□□□□ 0.4
UBE2F-214ENST00000440223 ZBED2Q9BTP6 218 aa17.57■□□□□ 0.4
UBE2F-214ENST00000440223 TRIM5Q9C035 493 aa17.57■□□□□ 0.4
UBE2F-214ENST00000440223 POLD4Q9HCU8 107 aa17.57■□□□□ 0.4
UBE2F-214ENST00000440223 TYW1Q9NV66 732 aaKnown RBP17.57■□□□□ 0.4
UBE2F-214ENST00000440223 FANCLQ9NW38 375 aa17.57■□□□□ 0.4
UBE2F-214ENST00000440223 TRIM49BA6NDI0 452 aa17.56■□□□□ 0.4
UBE2F-214ENST00000440223 TLL1O43897 1013 aa17.56■□□□□ 0.4
UBE2F-214ENST00000440223 GPR32O75388 356 aa17.56■□□□□ 0.4
UBE2F-214ENST00000440223 PRPF6O94906 941 aaKnown RBP17.56■□□□□ 0.4
UBE2F-214ENST00000440223 NAMPTP43490 491 aa17.56■□□□□ 0.4
UBE2F-214ENST00000440223 RABGGTBP53611 331 aa17.56■□□□□ 0.4
UBE2F-214ENST00000440223 NLRP11P59045 1033 aaKnown RBP17.56■□□□□ 0.4
UBE2F-214ENST00000440223 EDRF1Q3B7T1 1238 aa17.56■□□□□ 0.4
UBE2F-214ENST00000440223 TTI2Q6NXR4 508 aa17.56■□□□□ 0.4
UBE2F-214ENST00000440223 Q7L0L9 218 aa17.56■□□□□ 0.4
UBE2F-214ENST00000440223 HAUS6Q7Z4H7 955 aa17.56■□□□□ 0.4
UBE2F-214ENST00000440223 DEPTORQ8TB45 409 aa17.56■□□□□ 0.4
UBE2F-214ENST00000440223 TMEM143Q96AN5 459 aa17.56■□□□□ 0.4
UBE2F-214ENST00000440223 AGO3Q9H9G7 860 aaKnown RBP17.56■□□□□ 0.4
UBE2F-214ENST00000440223 SLC28A3Q9HAS3 691 aa17.56■□□□□ 0.4
UBE2F-214ENST00000440223 PADI3Q9ULW8 664 aa17.56■□□□□ 0.4
UBE2F-214ENST00000440223 PDXKO00764 312 aa17.55■□□□□ 0.4
UBE2F-214ENST00000440223 GPR182O15218 404 aa17.55■□□□□ 0.4
UBE2F-214ENST00000440223 SLC16A4O15374 487 aa17.55■□□□□ 0.4
UBE2F-214ENST00000440223 ASAP2O43150 1006 aa17.55■□□□□ 0.4
UBE2F-214ENST00000440223 SERPINC1P01008 464 aa17.55■□□□□ 0.4
UBE2F-214ENST00000440223 RPL13P26373 211 aaKnown RBP17.55■□□□□ 0.4
UBE2F-214ENST00000440223 ARL2P36404 184 aa17.55■□□□□ 0.4
UBE2F-214ENST00000440223 NPTX2P47972 431 aa17.55■□□□□ 0.4
UBE2F-214ENST00000440223 GPC3P51654 580 aa17.55■□□□□ 0.4
UBE2F-214ENST00000440223 CASP5P51878 434 aa17.55■□□□□ 0.4
UBE2F-214ENST00000440223 NFX1Q12986 1120 aaKnown RBP17.55■□□□□ 0.4
UBE2F-214ENST00000440223 FILIP1LQ4L180 1135 aa17.55■□□□□ 0.4
UBE2F-214ENST00000440223 ANKRD40Q6AI12 368 aa17.55■□□□□ 0.4
UBE2F-214ENST00000440223 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.55■□□□□ 0.4
UBE2F-214ENST00000440223 GLIS3Q8NEA6 775 aa17.55■□□□□ 0.4
UBE2F-214ENST00000440223 NLRP7Q8WX94 980 aa17.55■□□□□ 0.4
UBE2F-214ENST00000440223 CEP63Q96MT8 703 aa17.55■□□□□ 0.4
UBE2F-214ENST00000440223 FGFBP2Q9BYJ0 223 aa17.55■□□□□ 0.4
UBE2F-214ENST00000440223 NKX2-4Q9H2Z4 354 aa17.55■□□□□ 0.4
UBE2F-214ENST00000440223 SEMA6BQ9H3T3 888 aa17.55■□□□□ 0.4
UBE2F-214ENST00000440223 CGNQ9P2M7 1197 aaKnown RBP17.55■□□□□ 0.4
UBE2F-214ENST00000440223 SUCLA2Q9P2R7 463 aaPredicted RBP17.55■□□□□ 0.4
UBE2F-214ENST00000440223 YBX2Q9Y2T7 364 aaKnown RBP17.55■□□□□ 0.4
UBE2F-214ENST00000440223 LRRIQ4A6NIV6 560 aa17.54■□□□□ 0.4
UBE2F-214ENST00000440223 GJB5O95377 273 aa17.54■□□□□ 0.4
UBE2F-214ENST00000440223 EEF1GP26641 437 aaKnown RBP17.54■□□□□ 0.4
UBE2F-214ENST00000440223 SNRPFP62306 86 aaKnown RBP17.54■□□□□ 0.4
UBE2F-214ENST00000440223 GTF2BQ00403 316 aa17.54■□□□□ 0.4
UBE2F-214ENST00000440223 FKBP3Q00688 224 aaKnown RBP17.54■□□□□ 0.4
UBE2F-214ENST00000440223 CCDC173Q0VFZ6 552 aa17.54■□□□□ 0.4
UBE2F-214ENST00000440223 STRN3Q13033 797 aa17.54■□□□□ 0.4
UBE2F-214ENST00000440223 PPP2R2DQ66LE6 453 aa17.54■□□□□ 0.4
UBE2F-214ENST00000440223 ZNF410Q86VK4 478 aa17.54■□□□□ 0.4
UBE2F-214ENST00000440223 ZBTB8OSQ8IWT0 167 aa17.54■□□□□ 0.4
UBE2F-214ENST00000440223 TMEM40Q8WWA1 233 aa17.54■□□□□ 0.4
UBE2F-214ENST00000440223 FIZ1Q96SL8 496 aa17.54■□□□□ 0.4
UBE2F-214ENST00000440223 SRRTQ9BXP5 876 aaKnown RBP17.54■□□□□ 0.4
UBE2F-214ENST00000440223 GBP3Q9H0R5 595 aa17.54■□□□□ 0.4
UBE2F-214ENST00000440223 C2orf40Q9H1Z8 148 aa17.54■□□□□ 0.4
UBE2F-214ENST00000440223 ADAMTS10Q9H324 1103 aa17.54■□□□□ 0.4
UBE2F-214ENST00000440223 KCTD10Q9H3F6 313 aa17.54■□□□□ 0.4
UBE2F-214ENST00000440223 ZNF576Q9H609 170 aa17.54■□□□□ 0.4
UBE2F-214ENST00000440223 CDHR5Q9HBB8 845 aa17.54■□□□□ 0.4
UBE2F-214ENST00000440223 ERVK-5Q9HDB9 667 aa17.54■□□□□ 0.4
UBE2F-214ENST00000440223 NOC2LQ9Y3T9 749 aaKnown RBP17.54■□□□□ 0.4
UBE2F-214ENST00000440223 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.53■□□□□ 0.4
UBE2F-214ENST00000440223 DENND3A2RUS2 1198 aa17.53■□□□□ 0.4
UBE2F-214ENST00000440223 KCNJ18B7U540 433 aa17.53■□□□□ 0.4
UBE2F-214ENST00000440223 CETN3O15182 167 aa17.53■□□□□ 0.4
UBE2F-214ENST00000440223 PPP1R37O75864 691 aa17.53■□□□□ 0.4
UBE2F-214ENST00000440223 SLC34A2O95436 690 aa17.53■□□□□ 0.4
UBE2F-214ENST00000440223 GNA14O95837 355 aa17.53■□□□□ 0.4
UBE2F-214ENST00000440223 ZNF18P17022 549 aa17.53■□□□□ 0.4
UBE2F-214ENST00000440223 GLRA2P23416 452 aa17.53■□□□□ 0.4
UBE2F-214ENST00000440223 EIF4BP23588 611 aaKnown RBP17.53■□□□□ 0.4
UBE2F-214ENST00000440223 DEKP35659 375 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms