RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 SLC27A1Q6PCB7 646 aa21.96■■□□□ 1.11
SHROOM1-204ENST00000440118 TMEM173Q86WV6 379 aaPredicted RBP21.96■■□□□ 1.11
SHROOM1-204ENST00000440118 CDR2LQ86X02 465 aaPredicted RBP21.96■■□□□ 1.11
SHROOM1-204ENST00000440118 ZNF280BQ86YH2 543 aa21.96■■□□□ 1.11
SHROOM1-204ENST00000440118 C4orf32Q8N8J7 132 aa21.96■■□□□ 1.11
SHROOM1-204ENST00000440118 SMRP1Q8NCR6 262 aa21.96■■□□□ 1.11
SHROOM1-204ENST00000440118 SMG8Q8ND04 991 aaKnown RBP21.96■■□□□ 1.11
SHROOM1-204ENST00000440118 PRIMPOLQ96LW4 560 aa21.96■■□□□ 1.11
SHROOM1-204ENST00000440118 GAD1Q99259 594 aa21.96■■□□□ 1.11
SHROOM1-204ENST00000440118 EPHX3Q9H6B9 360 aa21.96■■□□□ 1.11
SHROOM1-204ENST00000440118 C5orf42Q9H799 3197 aa21.95■■□□□ 1.1
SHROOM1-204ENST00000440118 NR1I2O75469 434 aa21.95■■□□□ 1.1
SHROOM1-204ENST00000440118 PRPHP41219 470 aa21.95■■□□□ 1.1
SHROOM1-204ENST00000440118 MAPK6Q16659 721 aa21.95■■□□□ 1.1
SHROOM1-204ENST00000440118 AMHR2Q16671 573 aa21.95■■□□□ 1.1
SHROOM1-204ENST00000440118 CDCA2Q69YH5 1023 aaPredicted RBP21.95■■□□□ 1.1
SHROOM1-204ENST00000440118 DDX53Q86TM3 631 aaKnown RBP21.95■■□□□ 1.1
SHROOM1-204ENST00000440118 IGSF22Q8N9C0 903 aa21.95■■□□□ 1.1
SHROOM1-204ENST00000440118 TMEM175Q9BSA9 504 aa21.95■■□□□ 1.1
SHROOM1-204ENST00000440118 NXF3Q9H4D5 531 aaKnown RBP21.95■■□□□ 1.1
SHROOM1-204ENST00000440118 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.95■■□□□ 1.1
SHROOM1-204ENST00000440118 FAN1Q9Y2M0 1017 aa21.95■■□□□ 1.1
SHROOM1-204ENST00000440118 USP15Q9Y4E8 981 aaPredicted RBP21.95■■□□□ 1.1
SHROOM1-204ENST00000440118 MYH11P35749 1972 aa21.95■■□□□ 1.1
SHROOM1-204ENST00000440118 C2orf71A6NGG8 1288 aa21.94■■□□□ 1.1
SHROOM1-204ENST00000440118 ARL5CA6NH57 179 aa21.94■■□□□ 1.1
SHROOM1-204ENST00000440118 EYA4O95677 639 aa21.94■■□□□ 1.1
SHROOM1-204ENST00000440118 CXCL14O95715 111 aa21.94■■□□□ 1.1
SHROOM1-204ENST00000440118 ALDH2P05091 517 aa21.94■■□□□ 1.1
SHROOM1-204ENST00000440118 NAMPTP43490 491 aa21.94■■□□□ 1.1
SHROOM1-204ENST00000440118 PRPF4BQ13523 1007 aaKnown RBP21.94■■□□□ 1.1
SHROOM1-204ENST00000440118 GIT2Q14161 759 aa21.94■■□□□ 1.1
SHROOM1-204ENST00000440118 LARP1BQ659C4 914 aaKnown RBP21.94■■□□□ 1.1
SHROOM1-204ENST00000440118 MRPL43Q8N983 215 aaKnown RBP21.94■■□□□ 1.1
SHROOM1-204ENST00000440118 VN1R2Q8NFZ6 395 aa21.94■■□□□ 1.1
SHROOM1-204ENST00000440118 KIFAP3Q92845 792 aa21.94■■□□□ 1.1
SHROOM1-204ENST00000440118 CASP10Q92851 521 aa21.94■■□□□ 1.1
SHROOM1-204ENST00000440118 RPS6KC1Q96S38 1066 aa21.94■■□□□ 1.1
SHROOM1-204ENST00000440118 ADPGKQ9BRR6 497 aa21.94■■□□□ 1.1
SHROOM1-204ENST00000440118 ZBP1Q9H171 429 aa21.94■■□□□ 1.1
SHROOM1-204ENST00000440118 STK39Q9UEW8 545 aa21.94■■□□□ 1.1
SHROOM1-204ENST00000440118 PARP2Q9UGN5 583 aa21.94■■□□□ 1.1
SHROOM1-204ENST00000440118 DNM3Q9UQ16 869 aa21.94■■□□□ 1.1
SHROOM1-204ENST00000440118 PRG3Q9Y2Y8 225 aaPredicted RBP21.94■■□□□ 1.1
SHROOM1-204ENST00000440118 SPDYE4A6NLX3 237 aa21.93■■□□□ 1.1
SHROOM1-204ENST00000440118 PP2D1A8MPX8 630 aa21.93■■□□□ 1.1
SHROOM1-204ENST00000440118 N4BP3O15049 544 aa21.93■■□□□ 1.1
SHROOM1-204ENST00000440118 DDHD2O94830 711 aa21.93■■□□□ 1.1
SHROOM1-204ENST00000440118 SSBP05455 408 aaKnown RBP eCLIP21.93■■□□□ 1.1
SHROOM1-204ENST00000440118 PRKCBP05771 671 aa21.93■■□□□ 1.1
SHROOM1-204ENST00000440118 ALADP13716 330 aa21.93■■□□□ 1.1
SHROOM1-204ENST00000440118 OR1G1P47890 313 aa21.93■■□□□ 1.1
SHROOM1-204ENST00000440118 SCNN1GP51170 649 aa21.93■■□□□ 1.1
SHROOM1-204ENST00000440118 AFF1P51825 1210 aaKnown RBP21.93■■□□□ 1.1
SHROOM1-204ENST00000440118 ECM1Q16610 540 aa21.93■■□□□ 1.1
SHROOM1-204ENST00000440118 PPP4R3CPQ6ZMV5 832 aa21.93■■□□□ 1.1
SHROOM1-204ENST00000440118 AUTS2Q8WXX7 1259 aa21.93■■□□□ 1.1
SHROOM1-204ENST00000440118 BSNDQ8WZ55 320 aa21.93■■□□□ 1.1
SHROOM1-204ENST00000440118 CDK5RAP3Q96JB5 506 aa21.93■■□□□ 1.1
SHROOM1-204ENST00000440118 ZFP42Q96MM3 310 aa21.93■■□□□ 1.1
SHROOM1-204ENST00000440118 APOL5Q9BWW9 433 aa21.93■■□□□ 1.1
SHROOM1-204ENST00000440118 GIT1Q9Y2X7 761 aa21.93■■□□□ 1.1
SHROOM1-204ENST00000440118 A0A1B0GUA9 196 aa21.92■■□□□ 1.1
SHROOM1-204ENST00000440118 CTSAP10619 480 aa21.92■■□□□ 1.1
SHROOM1-204ENST00000440118 AKAP5P24588 427 aa21.92■■□□□ 1.1
SHROOM1-204ENST00000440118 TMEM31Q5JXX7 168 aa21.92■■□□□ 1.1
SHROOM1-204ENST00000440118 ANKRD54Q6NXT1 300 aa21.92■■□□□ 1.1
SHROOM1-204ENST00000440118 BCL7CQ8WUZ0 217 aaPredicted RBP21.92■■□□□ 1.1
SHROOM1-204ENST00000440118 KHSRPQ92945 711 aaKnown RBP eCLIP21.92■■□□□ 1.1
SHROOM1-204ENST00000440118 KIFC3Q9BVG8 833 aa21.92■■□□□ 1.1
SHROOM1-204ENST00000440118 RNF39Q9H2S5 420 aa21.92■■□□□ 1.1
SHROOM1-204ENST00000440118 HCFC2Q9Y5Z7 792 aa21.92■■□□□ 1.1
SHROOM1-204ENST00000440118 VWA3AA6NCI4 1184 aa21.91■■□□□ 1.1
SHROOM1-204ENST00000440118 B4GALT3O60512 393 aa21.91■■□□□ 1.1
SHROOM1-204ENST00000440118 CLASP2O75122 1294 aaKnown RBP21.91■■□□□ 1.1
SHROOM1-204ENST00000440118 CDC25AP30304 524 aa21.91■■□□□ 1.1
SHROOM1-204ENST00000440118 ATP2C1P98194 919 aaPredicted RBP21.91■■□□□ 1.1
SHROOM1-204ENST00000440118 TPRNQ4KMQ1 711 aa21.91■■□□□ 1.1
SHROOM1-204ENST00000440118 KLK14Q9P0G3 267 aa21.91■■□□□ 1.1
SHROOM1-204ENST00000440118 VPS37CA5D8V6 355 aaPredicted RBP21.9■■□□□ 1.1
SHROOM1-204ENST00000440118 FAM86C2PA6NEL3 165 aa21.9■■□□□ 1.1
SHROOM1-204ENST00000440118 CCDC169A6NNP5 214 aa21.9■■□□□ 1.1
SHROOM1-204ENST00000440118 E9PMD0 336 aa21.9■■□□□ 1.1
SHROOM1-204ENST00000440118 PI4K2BG5E9Z4 385 aa21.9■■□□□ 1.1
SHROOM1-204ENST00000440118 NRP1O14786 923 aa21.9■■□□□ 1.1
SHROOM1-204ENST00000440118 DCXO43602 365 aa21.9■■□□□ 1.1
SHROOM1-204ENST00000440118 URODP06132 367 aa21.9■■□□□ 1.1
SHROOM1-204ENST00000440118 HOXB8P17481 243 aaPredicted RBP21.9■■□□□ 1.1
SHROOM1-204ENST00000440118 COL9A1P20849 921 aa21.9■■□□□ 1.1
SHROOM1-204ENST00000440118 EFNA5P52803 228 aa21.9■■□□□ 1.1
SHROOM1-204ENST00000440118 DMP1Q13316 513 aaPredicted RBP21.9■■□□□ 1.1
SHROOM1-204ENST00000440118 FAM187BQ17R55 369 aa21.9■■□□□ 1.1
SHROOM1-204ENST00000440118 CES5AQ6NT32 575 aa21.9■■□□□ 1.1
SHROOM1-204ENST00000440118 APBB1IPQ7Z5R6 666 aaPredicted RBP21.9■■□□□ 1.1
SHROOM1-204ENST00000440118 DRC1Q96MC2 740 aa21.9■■□□□ 1.1
SHROOM1-204ENST00000440118 EMILIN2Q9BXX0 1053 aa21.9■■□□□ 1.1
SHROOM1-204ENST00000440118 FZD8Q9H461 694 aa21.9■■□□□ 1.1
SHROOM1-204ENST00000440118 PDZD7Q9H5P4 517 aa21.9■■□□□ 1.1
SHROOM1-204ENST00000440118 POLD4Q9HCU8 107 aa21.9■■□□□ 1.1
SHROOM1-204ENST00000440118 C19orf67A6NJJ6 358 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms