RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 RAVER2Q9HCJ3 691 aaKnown RBP14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 KIAA0391O15091 583 aaKnown RBP14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 TRAPPC3O43617 180 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 ATP9AO75110 1047 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 CHRNB2P17787 502 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 BIRC3Q13489 604 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 SNX1Q13596 522 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 NFIL3Q16649 462 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 CCDC38Q502W7 563 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 DAB2IPQ5VWQ8 1189 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 KCNV1Q6PIU1 500 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 B3GNT9Q6UX72 402 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 ZDHHC24Q6UX98 284 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 CCDC105Q8IYK2 499 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 KREMEN1Q96MU8 473 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 PSMD1Q99460 953 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 PI4K2AQ9BTU6 479 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 ZNF341Q9BYN7 854 aa14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 DNAJC17Q9NVM6 304 aaKnown RBP14.6□□□□□ -0.07
HERPUD1-204ENST00000439977 DHX15O43143 795 aaKnown RBP14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 NPM3O75607 178 aaKnown RBP14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 CPP00450 1065 aa14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 P4HBP07237 508 aaKnown RBP14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 YWHABP31946 246 aaKnown RBP14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 MRPS9P82933 396 aaKnown RBP14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 ICE2Q659A1 982 aa14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 CCDC137Q6PK04 289 aaKnown RBP14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 EPS8L1Q8TE68 723 aa14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 EHMT1Q9H9B1 1298 aa14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 TRPC6Q9Y210 931 aa14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 DLATP10515 647 aaKnown RBP14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 LLGL2Q6P1M3 1020 aa14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 CPLX4Q7Z7G2 160 aa14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 RHOT2Q8IXI1 618 aa14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 UBL4BQ8N7F7 174 aa14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 CABS1Q96KC9 395 aa14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 ACCSQ96QU6 501 aa14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 NUP85Q9BW27 656 aa14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 EFCC1Q9HA90 598 aa14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 ZNF277Q9NRM2 450 aaPredicted RBP14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 TTC7AQ9ULT0 858 aaPredicted RBP14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 QSER1Q2KHR3 1735 aa14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 NRXN2Q9P2S2 1712 aa14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 FOXO6A8MYZ6 492 aa14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 PPFIA2O75334 1257 aa14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 IBSPP21815 317 aaPredicted RBP14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 SSTR3P32745 418 aaPredicted RBP14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 SETQ01105 290 aaPredicted RBP14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 MTMR1Q13613 665 aa14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 OGFOD1Q8N543 542 aa14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 NAP1L3Q99457 506 aaPredicted RBP14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 ZSWIM1Q9BR11 485 aa14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 TRIM7Q9C029 511 aa14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 AZI2Q9H6S1 392 aa14.59□□□□□ -0.07
HERPUD1-204ENST00000439977 CTNND1O60716 968 aaKnown RBP14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 PLS3P13797 630 aa14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 ADSSP30520 456 aa14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 CAP2P40123 477 aa14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 QARSP47897 775 aaKnown RBP14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 MNAT1P51948 309 aa14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 GTF2A1P52655 376 aaPredicted RBP14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 TRIP13Q15645 432 aaPredicted RBP14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 TKFCQ3LXA3 575 aa14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 XKR9Q5GH70 373 aa14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 DENND2CQ68D51 928 aa14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 MICALCLQ6ZW33 695 aa14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 C1orf131Q8NDD1 294 aaKnown RBP14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 EPS8L3Q8TE67 593 aaKnown RBP14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 C1orf54Q8WWF1 131 aa14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 ZNF653Q96CK0 615 aa14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 TAAR1Q96RJ0 339 aa14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 RIT2Q99578 217 aa14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 GRHL1Q9NZI5 618 aa14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 TESPA1A2RU30 521 aaPredicted RBP14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 PTGIRP43119 386 aa14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 IFNAR2P48551 515 aa14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 FNTAP49354 379 aa14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 FKBP1AP62942 108 aaKnown RBP14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 LMBRD2Q68DH5 695 aaPredicted RBP14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 MMS22LQ6ZRQ5 1243 aa14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 SLC9A9Q8IVB4 645 aa14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 NEK9Q8TD19 979 aa14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 TAS1R2Q8TE23 839 aa14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 FAM151AQ8WW52 585 aa14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 FAM118BQ9BPY3 351 aa14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 TMEM206Q9H813 350 aa14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 KCND2Q9NZV8 630 aa14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 DBR1Q9UK59 544 aaKnown RBP14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 TELO2Q9Y4R8 837 aa14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 ZNF536O15090 1300 aa14.58□□□□□ -0.08
HERPUD1-204ENST00000439977 GOLGA6L7A0A1B0GV03 622 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 CLDN3O15551 220 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 CLSTN1O94985 981 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 RARAP10276 462 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 KRT5P13647 590 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 CHN1P15882 459 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 PEX5P50542 639 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 RASA3Q14644 834 aa14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 SNRNP35Q16560 246 aaKnown RBP14.57□□□□□ -0.08
HERPUD1-204ENST00000439977 ZNF564Q8TBZ8 553 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms