RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 LMNB1P20700 586 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 ATP5DP30049 168 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 SNAP25P60880 206 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 SGO2Q562F6 1265 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 PRUNE1Q86TP1 453 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 CPNE8Q86YQ8 564 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 FAM186BQ8IYM0 893 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 LRRC8CQ8TDW0 803 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 STMN2Q93045 179 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 FAM81BQ96LP2 452 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 CCDC77Q9BR77 488 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 SLCO1B3Q9NPD5 702 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 SERPINA10Q9UK55 444 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 DNM3Q9UQ16 869 aa12.52□□□□□ -0.41
SMPD4-209ENST00000439886 AKAP11Q9UKA4 1901 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 FAM187AA6NFU0 413 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 FAM13AO94988 1023 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 ZCCHC18P0CG32 403 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 DESP17661 470 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 TUBP50607 506 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 KLRC3Q07444 240 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 SFSWAPQ12872 951 aaKnown RBP12.51□□□□□ -0.41
SMPD4-209ENST00000439886 KCTD1Q719H9 257 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 PALB2Q86YC2 1186 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 ELMO3Q96BJ8 720 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 DNAJC19Q96DA6 116 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 DDX50Q9BQ39 737 aaKnown RBP12.51□□□□□ -0.41
SMPD4-209ENST00000439886 MXD3Q9BW11 206 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 RXFP1Q9HBX9 757 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 SCOCQ9UIL1 159 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 MINPP1Q9UNW1 487 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 NUB1Q9Y5A7 615 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.51□□□□□ -0.41
SMPD4-209ENST00000439886 RPTORQ8N122 1335 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 CLDN3O15551 220 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 PFDN1O60925 122 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 YY1P25490 414 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 IL9RQ01113 521 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 BNIP1Q12981 228 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 C12orf60Q5U649 245 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 DCAF12L1Q5VU92 463 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 ARHGEF18Q6ZSZ5 1173 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 EPM2AIP1Q7L775 607 aaPredicted RBP12.51□□□□□ -0.41
SMPD4-209ENST00000439886 LNX1Q8TBB1 728 aaPredicted RBP12.51□□□□□ -0.41
SMPD4-209ENST00000439886 RUNDC3BQ96NL0 473 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 CYTH2Q99418 400 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 BHMT2Q9H2M3 363 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 PCIF1Q9H4Z3 704 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 PFASO15067 1338 aa12.51□□□□□ -0.41
SMPD4-209ENST00000439886 COMTP21964 271 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 PSMC6P62333 389 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 KNOP1Q1ED39 458 aaKnown RBP12.5□□□□□ -0.41
SMPD4-209ENST00000439886 C3orf67Q6ZVT6 689 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 PPFIBP2Q8ND30 876 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 SUPT20HQ8NEM7 779 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 UBE2TQ9NPD8 197 aaPredicted RBP12.5□□□□□ -0.41
SMPD4-209ENST00000439886 EXOC3O60645 756 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 PHF2O75151 1096 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 PIAS1O75925 651 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 CA4P22748 312 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 RASSF2P50749 326 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 KRT17Q04695 432 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 OVGP1Q12889 678 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 DHX34Q14147 1143 aaKnown RBP12.5□□□□□ -0.41
SMPD4-209ENST00000439886 ZC2HC1CQ53FD0 456 aaPredicted RBP12.5□□□□□ -0.41
SMPD4-209ENST00000439886 TTBK2Q6IQ55 1244 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 ZDHHC24Q6UX98 284 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 CROCCP2Q86T23 111 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 SLC20A1Q8WUM9 679 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 DYDC2Q96IM9 177 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 SLC4A9Q96Q91 983 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 PSTPIP2Q9H939 334 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 VPS37BQ9H9H4 285 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 ZNF287Q9HBT7 754 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 ACP6Q9NPH0 428 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 A0A0G2JND7 137 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 CFAP69A5D8W1 941 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 EEF2P13639 858 aaKnown RBP12.5□□□□□ -0.41
SMPD4-209ENST00000439886 EIF4BP23588 611 aaKnown RBP12.5□□□□□ -0.41
SMPD4-209ENST00000439886 CHRNA3P32297 505 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 GCLCP48506 637 aaPredicted RBP12.5□□□□□ -0.41
SMPD4-209ENST00000439886 SERPINB4P48594 390 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 RNF207Q6ZRF8 634 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 ZNF365Q70YC5 407 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 TXNRD3Q86VQ6 643 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 ECHDC2Q86YB7 292 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 PRELID2Q8N945 189 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 UCMAQ8WVF2 138 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 HES6Q96HZ4 224 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 FGD4Q96M96 766 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 KIAA1683Q9H0B3 1180 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 ZDHHC18Q9NUE0 388 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 SLAIN2Q9P270 581 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 ANAPC5Q9UJX4 755 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 USTQ9Y2C2 406 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 RGPD5Q99666 1765 aa12.5□□□□□ -0.41
SMPD4-209ENST00000439886 ABCB11O95342 1321 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 PALM3A6NDB9 673 aaPredicted RBP12.49□□□□□ -0.41
SMPD4-209ENST00000439886 CCDC160A6NGH7 325 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 PODXLO00592 558 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms