RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 CBX2Q14781 532 aaPredicted RBP20.83■□□□□ 0.93
CCDC78-204ENST00000439619 PPP2R5AQ15172 486 aa20.83■□□□□ 0.93
CCDC78-204ENST00000439619 SLC27A1Q6PCB7 646 aa20.83■□□□□ 0.93
CCDC78-204ENST00000439619 POTEGQ6S5H5 508 aa20.83■□□□□ 0.93
CCDC78-204ENST00000439619 PADI6Q6TGC4 694 aa20.83■□□□□ 0.93
CCDC78-204ENST00000439619 PPFIBP1Q86W92 1011 aa20.83■□□□□ 0.93
CCDC78-204ENST00000439619 ZNF280BQ86YH2 543 aa20.83■□□□□ 0.93
CCDC78-204ENST00000439619 SMG8Q8ND04 991 aaKnown RBP20.83■□□□□ 0.93
CCDC78-204ENST00000439619 EMILIN2Q9BXX0 1053 aa20.83■□□□□ 0.93
CCDC78-204ENST00000439619 DZANK1Q9NVP4 752 aa20.83■□□□□ 0.93
CCDC78-204ENST00000439619 DAXXQ9UER7 740 aaPredicted RBP20.83■□□□□ 0.93
CCDC78-204ENST00000439619 SSX2IPQ9Y2D8 614 aa20.83■□□□□ 0.93
CCDC78-204ENST00000439619 GIT1Q9Y2X7 761 aa20.83■□□□□ 0.93
CCDC78-204ENST00000439619 HCFC2Q9Y5Z7 792 aa20.83■□□□□ 0.93
CCDC78-204ENST00000439619 ARL5CA6NH57 179 aa20.82■□□□□ 0.92
CCDC78-204ENST00000439619 CLASP2O75122 1294 aaKnown RBP20.82■□□□□ 0.92
CCDC78-204ENST00000439619 MCM2P49736 904 aa20.82■□□□□ 0.92
CCDC78-204ENST00000439619 PDIA5Q14554 519 aa20.82■□□□□ 0.92
CCDC78-204ENST00000439619 HERC4Q5GLZ8 1057 aaPredicted RBP20.82■□□□□ 0.92
CCDC78-204ENST00000439619 TMEM173Q86WV6 379 aaPredicted RBP20.82■□□□□ 0.92
CCDC78-204ENST00000439619 SUSD6Q92537 303 aa20.82■□□□□ 0.92
CCDC78-204ENST00000439619 RPGRIP1Q96KN7 1286 aa20.82■□□□□ 0.92
CCDC78-204ENST00000439619 NECTIN4Q96NY8 510 aa20.82■□□□□ 0.92
CCDC78-204ENST00000439619 EIF2AQ9BY44 585 aaKnown RBP20.82■□□□□ 0.92
CCDC78-204ENST00000439619 MYO7AQ13402 2215 aa20.82■□□□□ 0.92
CCDC78-204ENST00000439619 ATG2AQ2TAZ0 1938 aa20.81■□□□□ 0.92
CCDC78-204ENST00000439619 SPDYE4A6NLX3 237 aa20.81■□□□□ 0.92
CCDC78-204ENST00000439619 LOC730098B7Z3J9 87 aa20.81■□□□□ 0.92
CCDC78-204ENST00000439619 DDHD2O94830 711 aa20.81■□□□□ 0.92
CCDC78-204ENST00000439619 CYP11B2P19099 503 aa20.81■□□□□ 0.92
CCDC78-204ENST00000439619 MLH1P40692 756 aa20.81■□□□□ 0.92
CCDC78-204ENST00000439619 MAPK6Q16659 721 aa20.81■□□□□ 0.92
CCDC78-204ENST00000439619 MCTP1Q6DN14 999 aa20.81■□□□□ 0.92
CCDC78-204ENST00000439619 DEPTORQ8TB45 409 aa20.81■□□□□ 0.92
CCDC78-204ENST00000439619 IFT74Q96LB3 600 aa20.81■□□□□ 0.92
CCDC78-204ENST00000439619 GAD1Q99259 594 aa20.81■□□□□ 0.92
CCDC78-204ENST00000439619 APOL6Q9BWW8 343 aa20.81■□□□□ 0.92
CCDC78-204ENST00000439619 S1PR5Q9H228 398 aa20.81■□□□□ 0.92
CCDC78-204ENST00000439619 C11orf16Q9NQ32 467 aa20.81■□□□□ 0.92
CCDC78-204ENST00000439619 GPRC5CQ9NQ84 441 aa20.81■□□□□ 0.92
CCDC78-204ENST00000439619 MRPL17Q9NRX2 175 aaKnown RBP20.81■□□□□ 0.92
CCDC78-204ENST00000439619 MUTYHQ9UIF7 546 aa20.81■□□□□ 0.92
CCDC78-204ENST00000439619 A0A1B0GUA9 196 aa20.8■□□□□ 0.92
CCDC78-204ENST00000439619 H3BQV1 296 aa20.8■□□□□ 0.92
CCDC78-204ENST00000439619 NRP1O14786 923 aa20.8■□□□□ 0.92
CCDC78-204ENST00000439619 INPPL1O15357 1258 aa20.8■□□□□ 0.92
CCDC78-204ENST00000439619 OR1G1P47890 313 aa20.8■□□□□ 0.92
CCDC78-204ENST00000439619 PTGDRQ13258 359 aa20.8■□□□□ 0.92
CCDC78-204ENST00000439619 AMHR2Q16671 573 aa20.8■□□□□ 0.92
CCDC78-204ENST00000439619 KRT79Q5XKE5 535 aa20.8■□□□□ 0.92
CCDC78-204ENST00000439619 SYCE2Q6PIF2 218 aa20.8■□□□□ 0.92
CCDC78-204ENST00000439619 ELMSAN1Q6PJG2 1045 aa20.8■□□□□ 0.92
CCDC78-204ENST00000439619 PPP4R3CPQ6ZMV5 832 aa20.8■□□□□ 0.92
CCDC78-204ENST00000439619 KIFAP3Q92845 792 aa20.8■□□□□ 0.92
CCDC78-204ENST00000439619 RIPOR3Q96MK2 946 aa20.8■□□□□ 0.92
CCDC78-204ENST00000439619 RPS6KC1Q96S38 1066 aa20.8■□□□□ 0.92
CCDC78-204ENST00000439619 ADPGKQ9BRR6 497 aa20.8■□□□□ 0.92
CCDC78-204ENST00000439619 APOL5Q9BWW9 433 aa20.8■□□□□ 0.92
CCDC78-204ENST00000439619 NR2E1Q9Y466 385 aa20.8■□□□□ 0.92
CCDC78-204ENST00000439619 ARIH1Q9Y4X5 557 aaPredicted RBP20.8■□□□□ 0.92
CCDC78-204ENST00000439619 HES2Q9Y543 173 aa20.8■□□□□ 0.92
CCDC78-204ENST00000439619 N4BP3O15049 544 aa20.79■□□□□ 0.92
CCDC78-204ENST00000439619 B4GALT5O43286 388 aa20.79■□□□□ 0.92
CCDC78-204ENST00000439619 NPTXRO95502 500 aa20.79■□□□□ 0.92
CCDC78-204ENST00000439619 URODP06132 367 aa20.79■□□□□ 0.92
CCDC78-204ENST00000439619 NAMPTP43490 491 aa20.79■□□□□ 0.92
CCDC78-204ENST00000439619 EFNA5P52803 228 aa20.79■□□□□ 0.92
CCDC78-204ENST00000439619 PRPF4BQ13523 1007 aaKnown RBP20.79■□□□□ 0.92
CCDC78-204ENST00000439619 FAM187BQ17R55 369 aa20.79■□□□□ 0.92
CCDC78-204ENST00000439619 RILPL1Q5EBL4 403 aa20.79■□□□□ 0.92
CCDC78-204ENST00000439619 CDCA2Q69YH5 1023 aaPredicted RBP20.79■□□□□ 0.92
CCDC78-204ENST00000439619 DTHD1Q6ZMT9 781 aa20.79■□□□□ 0.92
CCDC78-204ENST00000439619 APBB1IPQ7Z5R6 666 aaPredicted RBP20.79■□□□□ 0.92
CCDC78-204ENST00000439619 SNX29Q8TEQ0 813 aa20.79■□□□□ 0.92
CCDC78-204ENST00000439619 BCL7CQ8WUZ0 217 aaPredicted RBP20.79■□□□□ 0.92
CCDC78-204ENST00000439619 AUTS2Q8WXX7 1259 aa20.79■□□□□ 0.92
CCDC78-204ENST00000439619 COLEC11Q9BWP8 271 aa20.79■□□□□ 0.92
CCDC78-204ENST00000439619 BHMT2Q9H2M3 363 aa20.79■□□□□ 0.92
CCDC78-204ENST00000439619 RNF39Q9H2S5 420 aa20.79■□□□□ 0.92
CCDC78-204ENST00000439619 ADAM7Q9H2U9 754 aa20.79■□□□□ 0.92
CCDC78-204ENST00000439619 PARP2Q9UGN5 583 aa20.79■□□□□ 0.92
CCDC78-204ENST00000439619 KIAA1024Q9UPX6 916 aa20.79■□□□□ 0.92
CCDC78-204ENST00000439619 PRG3Q9Y2Y8 225 aaPredicted RBP20.79■□□□□ 0.92
CCDC78-204ENST00000439619 ZMYM2Q9UBW7 1377 aa20.79■□□□□ 0.92
CCDC78-204ENST00000439619 KLRC2P26717 231 aa20.78■□□□□ 0.92
CCDC78-204ENST00000439619 PRPHP41219 470 aa20.78■□□□□ 0.92
CCDC78-204ENST00000439619 MTHFRP42898 656 aa20.78■□□□□ 0.92
CCDC78-204ENST00000439619 SCNN1GP51170 649 aa20.78■□□□□ 0.92
CCDC78-204ENST00000439619 AFF1P51825 1210 aaKnown RBP20.78■□□□□ 0.92
CCDC78-204ENST00000439619 NBR1Q14596 966 aa20.78■□□□□ 0.92
CCDC78-204ENST00000439619 PTPN14Q15678 1187 aa20.78■□□□□ 0.92
CCDC78-204ENST00000439619 KIAA1841Q6NSI8 718 aa20.78■□□□□ 0.92
CCDC78-204ENST00000439619 CABP7Q86V35 215 aa20.78■□□□□ 0.92
CCDC78-204ENST00000439619 COLGALT2Q8IYK4 626 aa20.78■□□□□ 0.92
CCDC78-204ENST00000439619 C4orf32Q8N8J7 132 aa20.78■□□□□ 0.92
CCDC78-204ENST00000439619 FAM122AQ96E09 287 aa20.78■□□□□ 0.92
CCDC78-204ENST00000439619 TMX3Q96JJ7 454 aa20.78■□□□□ 0.92
CCDC78-204ENST00000439619 FZD8Q9H461 694 aa20.78■□□□□ 0.92
CCDC78-204ENST00000439619 NXF3Q9H4D5 531 aaKnown RBP20.78■□□□□ 0.92
CCDC78-204ENST00000439619 DPP7Q9UHL4 492 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms