RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 TCEAL9Q9UHQ7 104 aa4.68□□□□□ -1.66
VPS41-207ENST00000439468 USP18Q9UMW8 372 aa4.68□□□□□ -1.66
VPS41-207ENST00000439468 C2orf78A6NCI8 922 aa4.67□□□□□ -1.66
VPS41-207ENST00000439468 TSPAN6O43657 245 aa4.67□□□□□ -1.66
VPS41-207ENST00000439468 TOX4O94842 621 aa4.67□□□□□ -1.66
VPS41-207ENST00000439468 ZSCAN20P17040 1043 aaPredicted RBP4.67□□□□□ -1.66
VPS41-207ENST00000439468 ENPP1P22413 925 aa4.67□□□□□ -1.66
VPS41-207ENST00000439468 ADCY7P51828 1080 aa4.67□□□□□ -1.66
VPS41-207ENST00000439468 LGALS4P56470 323 aa4.67□□□□□ -1.66
VPS41-207ENST00000439468 CDK17Q00537 523 aa4.67□□□□□ -1.66
VPS41-207ENST00000439468 PIN1Q13526 163 aaPredicted RBP4.67□□□□□ -1.66
VPS41-207ENST00000439468 SAFB2Q14151 953 aaKnown RBP eCLIP4.67□□□□□ -1.66
VPS41-207ENST00000439468 PPP2R5AQ15172 486 aa4.67□□□□□ -1.66
VPS41-207ENST00000439468 FSCN1Q16658 493 aaKnown RBP4.67□□□□□ -1.66
VPS41-207ENST00000439468 CRIP3Q6Q6R5 217 aa4.67□□□□□ -1.66
VPS41-207ENST00000439468 MAMDC4Q6UXC1 1216 aa4.67□□□□□ -1.66
VPS41-207ENST00000439468 KANSL1Q7Z3B3 1105 aa4.67□□□□□ -1.66
VPS41-207ENST00000439468 KCNK18Q7Z418 384 aa4.67□□□□□ -1.66
VPS41-207ENST00000439468 ADGRE4PQ86SQ3 457 aa4.67□□□□□ -1.66
VPS41-207ENST00000439468 C14orf80Q86SX3 495 aa4.67□□□□□ -1.66
VPS41-207ENST00000439468 TPH2Q8IWU9 490 aa4.67□□□□□ -1.66
VPS41-207ENST00000439468 PLA2G15Q8NCC3 412 aa4.67□□□□□ -1.66
VPS41-207ENST00000439468 SLC16A11Q8NCK7 471 aa4.67□□□□□ -1.66
VPS41-207ENST00000439468 NKD2Q969F2 451 aaPredicted RBP4.67□□□□□ -1.66
VPS41-207ENST00000439468 ARL8AQ96BM9 186 aa4.67□□□□□ -1.66
VPS41-207ENST00000439468 HIST1H2AHQ96KK5 128 aa4.67□□□□□ -1.66
VPS41-207ENST00000439468 HIST1H2AJQ99878 128 aa4.67□□□□□ -1.66
VPS41-207ENST00000439468 KCTD10Q9H3F6 313 aa4.67□□□□□ -1.66
VPS41-207ENST00000439468 USP36Q9P275 1121 aaKnown RBP4.67□□□□□ -1.66
VPS41-207ENST00000439468 KCNG1Q9UIX4 513 aa4.67□□□□□ -1.66
VPS41-207ENST00000439468 ZNF180Q9UJW8 692 aa4.67□□□□□ -1.66
VPS41-207ENST00000439468 HS3ST3A1Q9Y663 406 aa4.67□□□□□ -1.66
VPS41-207ENST00000439468 MYPNQ86TC9 1320 aa4.67□□□□□ -1.66
VPS41-207ENST00000439468 UBE2QL1A1L167 161 aa4.66□□□□□ -1.66
VPS41-207ENST00000439468 TRIM75PA6NK02 468 aa4.66□□□□□ -1.66
VPS41-207ENST00000439468 CYP27B1O15528 508 aa4.66□□□□□ -1.66
VPS41-207ENST00000439468 AKAP8O43823 692 aaKnown RBP4.66□□□□□ -1.66
VPS41-207ENST00000439468 OPHN1O60890 802 aa4.66□□□□□ -1.66
VPS41-207ENST00000439468 FZD7O75084 574 aa4.66□□□□□ -1.66
VPS41-207ENST00000439468 ABLIM3O94929 683 aa4.66□□□□□ -1.66
VPS41-207ENST00000439468 SNUPNO95149 360 aaKnown RBP4.66□□□□□ -1.66
VPS41-207ENST00000439468 ACRV1P26436 265 aa4.66□□□□□ -1.66
VPS41-207ENST00000439468 FOXE3Q13461 319 aa4.66□□□□□ -1.66
VPS41-207ENST00000439468 CLEC14AQ86T13 490 aa4.66□□□□□ -1.66
VPS41-207ENST00000439468 SLC41A1Q8IVJ1 513 aa4.66□□□□□ -1.66
VPS41-207ENST00000439468 CHPFQ8IZ52 775 aa4.66□□□□□ -1.66
VPS41-207ENST00000439468 JPH3Q8WXH2 748 aaPredicted RBP4.66□□□□□ -1.66
VPS41-207ENST00000439468 TEKT5Q96M29 485 aa4.66□□□□□ -1.66
VPS41-207ENST00000439468 ACAP3Q96P50 834 aa4.66□□□□□ -1.66
VPS41-207ENST00000439468 PLEKHG4BQ96PX9 1271 aa4.66□□□□□ -1.66
VPS41-207ENST00000439468 UIMC1Q96RL1 719 aa4.66□□□□□ -1.66
VPS41-207ENST00000439468 SCAND2PQ9GZW5 306 aaPredicted RBP4.66□□□□□ -1.66
VPS41-207ENST00000439468 CDH19Q9H159 772 aa4.66□□□□□ -1.66
VPS41-207ENST00000439468 C14orf93Q9H972 538 aaKnown RBP4.66□□□□□ -1.66
VPS41-207ENST00000439468 IL23AQ9NPF7 189 aa4.66□□□□□ -1.66
VPS41-207ENST00000439468 DPP7Q9UHL4 492 aa4.66□□□□□ -1.66
VPS41-207ENST00000439468 GIT1Q9Y2X7 761 aa4.66□□□□□ -1.66
VPS41-207ENST00000439468 SPEF1Q9Y4P9 236 aa4.66□□□□□ -1.66
VPS41-207ENST00000439468 A0A0A6YYJ9 748 aa4.65□□□□□ -1.67
VPS41-207ENST00000439468 PMS2P1A4D2B8 440 aa4.65□□□□□ -1.67
VPS41-207ENST00000439468 KLHL33A6NCF5 533 aa4.65□□□□□ -1.67
VPS41-207ENST00000439468 NPIPB8E9PQR5 432 aa4.65□□□□□ -1.67
VPS41-207ENST00000439468 FSBPO95073 299 aa4.65□□□□□ -1.67
VPS41-207ENST00000439468 ZRANB2O95218 330 aaKnown RBP eCLIP4.65□□□□□ -1.67
VPS41-207ENST00000439468 CFBP00751 764 aa4.65□□□□□ -1.67
VPS41-207ENST00000439468 PFKMP08237 780 aa4.65□□□□□ -1.67
VPS41-207ENST00000439468 PF4V1P10720 104 aa4.65□□□□□ -1.67
VPS41-207ENST00000439468 C5AR1P21730 350 aa4.65□□□□□ -1.67
VPS41-207ENST00000439468 MTNR1BP49286 362 aa4.65□□□□□ -1.67
VPS41-207ENST00000439468 PTH1RQ03431 593 aa4.65□□□□□ -1.67
VPS41-207ENST00000439468 MAN2A1Q16706 1144 aa4.65□□□□□ -1.67
VPS41-207ENST00000439468 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.65□□□□□ -1.67
VPS41-207ENST00000439468 ZFPM1Q8IX07 1006 aa4.65□□□□□ -1.67
VPS41-207ENST00000439468 AMOTL1Q8IY63 956 aa4.65□□□□□ -1.67
VPS41-207ENST00000439468 THEMISQ8N1K5 641 aaPredicted RBP4.65□□□□□ -1.67
VPS41-207ENST00000439468 ANKRD35Q8N283 1001 aa4.65□□□□□ -1.67
VPS41-207ENST00000439468 CPA6Q8N4T0 437 aa4.65□□□□□ -1.67
VPS41-207ENST00000439468 GPHA2Q96T91 129 aa4.65□□□□□ -1.67
VPS41-207ENST00000439468 MPHOSPH9Q99550 1183 aa4.65□□□□□ -1.67
VPS41-207ENST00000439468 TCF25Q9BQ70 676 aa4.65□□□□□ -1.67
VPS41-207ENST00000439468 SLC13A1Q9BZW2 595 aa4.65□□□□□ -1.67
VPS41-207ENST00000439468 EPC1Q9H2F5 836 aa4.65□□□□□ -1.67
VPS41-207ENST00000439468 EVLQ9UI08 416 aaPredicted RBP4.65□□□□□ -1.67
VPS41-207ENST00000439468 PRSS50Q9UI38 385 aa4.65□□□□□ -1.67
VPS41-207ENST00000439468 ZBTB21Q9ULJ3 1066 aa4.65□□□□□ -1.67
VPS41-207ENST00000439468 SH3BP1Q9Y3L3 701 aa4.65□□□□□ -1.67
VPS41-207ENST00000439468 JUNP05412 331 aaKnown RBP4.64□□□□□ -1.67
VPS41-207ENST00000439468 C1SP09871 688 aa4.64□□□□□ -1.67
VPS41-207ENST00000439468 VSIG10L2P0DP72 767 aa4.64□□□□□ -1.67
VPS41-207ENST00000439468 AGXTP21549 392 aa4.64□□□□□ -1.67
VPS41-207ENST00000439468 XPAP23025 273 aaPredicted RBP4.64□□□□□ -1.67
VPS41-207ENST00000439468 RECQLP46063 649 aaPredicted RBP4.64□□□□□ -1.67
VPS41-207ENST00000439468 DGCR2P98153 550 aa4.64□□□□□ -1.67
VPS41-207ENST00000439468 PPARAQ07869 468 aa4.64□□□□□ -1.67
VPS41-207ENST00000439468 CNGB1Q14028 1251 aaPredicted RBP4.64□□□□□ -1.67
VPS41-207ENST00000439468 ELAVL1Q15717 326 aaKnown RBP4.64□□□□□ -1.67
VPS41-207ENST00000439468 LSM12Q3MHD2 195 aaKnown RBP4.64□□□□□ -1.67
VPS41-207ENST00000439468 GAGE13Q4V321 117 aa4.64□□□□□ -1.67
VPS41-207ENST00000439468 EFCAB2Q5VUJ9 269 aa4.64□□□□□ -1.67
VPS41-207ENST00000439468 FAM111BQ6SJ93 734 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms