RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 CARD9Q9H257 536 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 BSDC1Q9NW68 430 aaPredicted RBP14.36□□□□□ -0.11
ACTN1-204ENST00000438964 ANKIB1Q9P2G1 1089 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 DCTN4Q9UJW0 460 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.36□□□□□ -0.11
ACTN1-204ENST00000438964 ADAMTSL3P82987 1691 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 GSTTP1A0A1W2PQM5 241 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 LRRD1A4D1F6 860 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 SMAPO00193 183 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 KRT17Q04695 432 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 OVGP1Q12889 678 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 SHROOM1Q2M3G4 852 aaPredicted RBP14.36□□□□□ -0.11
ACTN1-204ENST00000438964 PCIF1Q9H4Z3 704 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 CHST7Q9NS84 486 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 CHKBQ9Y259 395 aa14.36□□□□□ -0.11
ACTN1-204ENST00000438964 A0A1W2PRG0 241 aa14.35□□□□□ -0.11
ACTN1-204ENST00000438964 PRKCIP41743 596 aa14.35□□□□□ -0.11
ACTN1-204ENST00000438964 ADGRF4Q8IZF3 695 aa14.35□□□□□ -0.11
ACTN1-204ENST00000438964 TBC1D10AQ9BXI6 508 aa14.35□□□□□ -0.11
ACTN1-204ENST00000438964 RNPEPL1Q9HAU8 725 aa14.35□□□□□ -0.11
ACTN1-204ENST00000438964 FAM196BA6NMK8 535 aa14.35□□□□□ -0.11
ACTN1-204ENST00000438964 POC1B-GALNT4F8VUJ3 575 aa14.35□□□□□ -0.11
ACTN1-204ENST00000438964 TPBGLP0DKB5 382 aa14.35□□□□□ -0.11
ACTN1-204ENST00000438964 RARGP13631 454 aa14.35□□□□□ -0.11
ACTN1-204ENST00000438964 FAM186BQ8IYM0 893 aa14.35□□□□□ -0.11
ACTN1-204ENST00000438964 SLC30A5Q8TAD4 765 aa14.35□□□□□ -0.11
ACTN1-204ENST00000438964 CKAP2Q8WWK9 683 aa14.35□□□□□ -0.11
ACTN1-204ENST00000438964 SH2D3AQ9BRG2 576 aa14.35□□□□□ -0.11
ACTN1-204ENST00000438964 TRIM7Q9C029 511 aa14.35□□□□□ -0.11
ACTN1-204ENST00000438964 DENND2DQ9H6A0 471 aaPredicted RBP14.35□□□□□ -0.11
ACTN1-204ENST00000438964 NUMBLQ9Y6R0 609 aa14.35□□□□□ -0.11
ACTN1-204ENST00000438964 DLEC1Q9Y238 1755 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 GJB6O95452 261 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 FERP16591 822 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 COILP38432 576 aaPredicted RBP14.34□□□□□ -0.11
ACTN1-204ENST00000438964 BTDP43251 543 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 RBM5P52756 815 aaKnown RBP eCLIP14.34□□□□□ -0.11
ACTN1-204ENST00000438964 SLC12A3P55017 1021 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 RPS8P62241 208 aaKnown RBP14.34□□□□□ -0.11
ACTN1-204ENST00000438964 DHX34Q14147 1143 aaKnown RBP14.34□□□□□ -0.11
ACTN1-204ENST00000438964 EPC2Q52LR7 807 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 SAMD1Q6SPF0 538 aaPredicted RBP14.34□□□□□ -0.11
ACTN1-204ENST00000438964 PCDHA3Q9Y5H8 950 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.34□□□□□ -0.11
ACTN1-204ENST00000438964 ARAP2Q8WZ64 1704 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 KLHL33A6NCF5 533 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 FAM187AA6NFU0 413 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 TMEM253P0C7T8 217 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 TAC1P20366 129 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 CALB2P22676 271 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 GBP1P32455 592 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 MARSP56192 900 aaKnown RBP14.34□□□□□ -0.11
ACTN1-204ENST00000438964 DLG4P78352 724 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 USP4Q13107 963 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 SEL1L2Q5TEA6 688 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 PHLDB3Q6NSJ2 640 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 ISLR2Q6UXK2 745 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 RNF207Q6ZRF8 634 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 FRMD5Q7Z6J6 570 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 ZC3H18Q86VM9 953 aaKnown RBP14.34□□□□□ -0.11
ACTN1-204ENST00000438964 CCNJLQ8IV13 435 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 HERPUD2Q9BSE4 406 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 LRRC27Q9C0I9 530 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 GPR88Q9GZN0 384 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 PSTPIP2Q9H939 334 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 NENFQ9UMX5 172 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 NAALADL1Q9UQQ1 740 aa14.34□□□□□ -0.11
ACTN1-204ENST00000438964 C2orf71A6NGG8 1288 aa14.33□□□□□ -0.11
ACTN1-204ENST00000438964 RASA4BC9J798 803 aa14.33□□□□□ -0.11
ACTN1-204ENST00000438964 TP73O15350 636 aa14.33□□□□□ -0.11
ACTN1-204ENST00000438964 RASA4O43374 803 aa14.33□□□□□ -0.11
ACTN1-204ENST00000438964 GNAZP19086 355 aa14.33□□□□□ -0.11
ACTN1-204ENST00000438964 SSTR3P32745 418 aaPredicted RBP14.33□□□□□ -0.11
ACTN1-204ENST00000438964 ITGA8P53708 1063 aa14.33□□□□□ -0.11
ACTN1-204ENST00000438964 WDR4P57081 412 aaKnown RBP14.33□□□□□ -0.11
ACTN1-204ENST00000438964 RCN2Q14257 317 aa14.33□□□□□ -0.11
ACTN1-204ENST00000438964 CCDC6Q16204 474 aa14.33□□□□□ -0.11
ACTN1-204ENST00000438964 CERKLQ49MI3 558 aaPredicted RBP14.33□□□□□ -0.11
ACTN1-204ENST00000438964 GRIPAP1Q4V328 841 aa14.33□□□□□ -0.11
ACTN1-204ENST00000438964 KHDC1Q4VXA5 237 aaKnown RBP14.33□□□□□ -0.11
ACTN1-204ENST00000438964 DPP8Q6V1X1 898 aaPredicted RBP14.33□□□□□ -0.11
ACTN1-204ENST00000438964 ZSWIM1Q9BR11 485 aa14.33□□□□□ -0.11
ACTN1-204ENST00000438964 DNAJC18Q9H819 358 aa14.33□□□□□ -0.11
ACTN1-204ENST00000438964 JMJD4Q9H9V9 463 aa14.33□□□□□ -0.11
ACTN1-204ENST00000438964 UBE2TQ9NPD8 197 aaPredicted RBP14.33□□□□□ -0.11
ACTN1-204ENST00000438964 NKIRAS1Q9NYS0 192 aa14.33□□□□□ -0.11
ACTN1-204ENST00000438964 UBTFL6P0CB48 400 aaPredicted RBP14.33□□□□□ -0.12
ACTN1-204ENST00000438964 ZCCHC18P0CG32 403 aa14.33□□□□□ -0.12
ACTN1-204ENST00000438964 AKR1B1P15121 316 aa14.33□□□□□ -0.12
ACTN1-204ENST00000438964 CHRNA3P32297 505 aa14.33□□□□□ -0.12
ACTN1-204ENST00000438964 USH1GQ495M9 461 aa14.33□□□□□ -0.12
ACTN1-204ENST00000438964 DSTYKQ6XUX3 929 aa14.33□□□□□ -0.12
ACTN1-204ENST00000438964 RPUSD2Q8IZ73 545 aaKnown RBP14.33□□□□□ -0.12
ACTN1-204ENST00000438964 MYCT1Q8N699 235 aa14.33□□□□□ -0.12
ACTN1-204ENST00000438964 ZSWIM2Q8NEG5 633 aa14.33□□□□□ -0.12
ACTN1-204ENST00000438964 STK32AQ8WU08 396 aa14.33□□□□□ -0.12
ACTN1-204ENST00000438964 LRRC37BQ96QE4 947 aa14.33□□□□□ -0.12
ACTN1-204ENST00000438964 NAP1L3Q99457 506 aaPredicted RBP14.33□□□□□ -0.12
ACTN1-204ENST00000438964 CCDC134Q9H6E4 229 aa14.33□□□□□ -0.12
ACTN1-204ENST00000438964 PRKAG3Q9UGI9 489 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms