RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 URODP06132 367 aa12.61□□□□□ -0.39
CSTF3-203ENST00000438862 CLCN3P51790 818 aa12.61□□□□□ -0.39
CSTF3-203ENST00000438862 AK2P54819 239 aa12.61□□□□□ -0.39
CSTF3-203ENST00000438862 CDC42EP1Q00587 391 aa12.61□□□□□ -0.39
CSTF3-203ENST00000438862 PPP2R5DQ14738 602 aa12.61□□□□□ -0.39
CSTF3-203ENST00000438862 CSRP2Q16527 193 aa12.61□□□□□ -0.39
CSTF3-203ENST00000438862 UBE2SQ16763 222 aa12.61□□□□□ -0.39
CSTF3-203ENST00000438862 MTSS1LQ765P7 747 aa12.61□□□□□ -0.39
CSTF3-203ENST00000438862 GET4Q7L5D6 327 aaPredicted RBP12.61□□□□□ -0.39
CSTF3-203ENST00000438862 PACS2Q86VP3 889 aa12.61□□□□□ -0.39
CSTF3-203ENST00000438862 TEX2Q8IWB9 1127 aa12.61□□□□□ -0.39
CSTF3-203ENST00000438862 CTCFLQ8NI51 663 aaPredicted RBP12.61□□□□□ -0.39
CSTF3-203ENST00000438862 TMEM175Q9BSA9 504 aa12.61□□□□□ -0.39
CSTF3-203ENST00000438862 MYL10Q9BUA6 226 aa12.61□□□□□ -0.39
CSTF3-203ENST00000438862 GBP3Q9H0R5 595 aa12.61□□□□□ -0.39
CSTF3-203ENST00000438862 PRMT8Q9NR22 394 aaPredicted RBP12.61□□□□□ -0.39
CSTF3-203ENST00000438862 SEMA4GQ9NTN9 838 aa12.61□□□□□ -0.39
CSTF3-203ENST00000438862 ZDHHC7Q9NXF8 308 aa12.61□□□□□ -0.39
CSTF3-203ENST00000438862 FAN1Q9Y2M0 1017 aa12.61□□□□□ -0.39
CSTF3-203ENST00000438862 MAFBQ9Y5Q3 323 aaPredicted RBP12.61□□□□□ -0.39
CSTF3-203ENST00000438862 HIP1O00291 1037 aa12.6□□□□□ -0.39
CSTF3-203ENST00000438862 TEX28O15482 410 aa12.6□□□□□ -0.39
CSTF3-203ENST00000438862 ZNF623O75123 536 aa12.6□□□□□ -0.39
CSTF3-203ENST00000438862 OFD1O75665 1012 aa12.6□□□□□ -0.39
CSTF3-203ENST00000438862 GNAQP50148 359 aa12.6□□□□□ -0.39
CSTF3-203ENST00000438862 GPC3P51654 580 aa12.6□□□□□ -0.39
CSTF3-203ENST00000438862 TSSK4Q6SA08 328 aa12.6□□□□□ -0.39
CSTF3-203ENST00000438862 PRR23CQ6ZRP0 262 aa12.6□□□□□ -0.39
CSTF3-203ENST00000438862 LINC01465Q8N7H1 131 aa12.6□□□□□ -0.39
CSTF3-203ENST00000438862 URGCPQ8TCY9 931 aa12.6□□□□□ -0.39
CSTF3-203ENST00000438862 FGF14Q92915 247 aa12.6□□□□□ -0.39
CSTF3-203ENST00000438862 PGBD4Q96DM1 585 aa12.6□□□□□ -0.39
CSTF3-203ENST00000438862 SCLT1Q96NL6 688 aa12.6□□□□□ -0.39
CSTF3-203ENST00000438862 FAM193BQ96PV7 902 aaPredicted RBP12.6□□□□□ -0.39
CSTF3-203ENST00000438862 RPP25Q9BUL9 199 aaKnown RBP12.6□□□□□ -0.39
CSTF3-203ENST00000438862 PRKD2Q9BZL6 878 aa12.6□□□□□ -0.39
CSTF3-203ENST00000438862 RXFP1Q9HBX9 757 aa12.6□□□□□ -0.39
CSTF3-203ENST00000438862 SENP2Q9HC62 589 aa12.6□□□□□ -0.39
CSTF3-203ENST00000438862 DIAPH3Q9NSV4 1193 aa12.6□□□□□ -0.39
CSTF3-203ENST00000438862 KANSL3Q9P2N6 904 aa12.6□□□□□ -0.39
CSTF3-203ENST00000438862 INPP5FQ9Y2H2 1132 aa12.6□□□□□ -0.39
CSTF3-203ENST00000438862 ANKRD11Q6UB99 2663 aaPredicted RBP12.59□□□□□ -0.39
CSTF3-203ENST00000438862 RALGAPA1Q6GYQ0 2036 aa12.59□□□□□ -0.39
CSTF3-203ENST00000438862 DDX39AO00148 427 aaKnown RBP12.59□□□□□ -0.39
CSTF3-203ENST00000438862 C2CD2LO14523 706 aa12.59□□□□□ -0.39
CSTF3-203ENST00000438862 GAS2O43903 313 aaKnown RBP12.59□□□□□ -0.39
CSTF3-203ENST00000438862 FOSP01100 380 aaPredicted RBP12.59□□□□□ -0.39
CSTF3-203ENST00000438862 FSHRP23945 695 aa12.59□□□□□ -0.39
CSTF3-203ENST00000438862 RAB27AP51159 221 aa12.59□□□□□ -0.39
CSTF3-203ENST00000438862 N4BP2L1Q5TBK1 243 aaPredicted RBP12.59□□□□□ -0.39
CSTF3-203ENST00000438862 IL31Q6EBC2 164 aa12.59□□□□□ -0.39
CSTF3-203ENST00000438862 TWF2Q6IBS0 349 aaKnown RBP12.59□□□□□ -0.39
CSTF3-203ENST00000438862 PARM1Q6UWI2 310 aa12.59□□□□□ -0.39
CSTF3-203ENST00000438862 Q6ZNB5 142 aa12.59□□□□□ -0.39
CSTF3-203ENST00000438862 NIPA1Q7RTP0 329 aa12.59□□□□□ -0.39
CSTF3-203ENST00000438862 ZNF280BQ86YH2 543 aa12.59□□□□□ -0.39
CSTF3-203ENST00000438862 LPPQ93052 612 aa12.59□□□□□ -0.39
CSTF3-203ENST00000438862 FAM167AQ96KS9 214 aa12.59□□□□□ -0.39
CSTF3-203ENST00000438862 GCOM2Q9BZD3 368 aaPredicted RBP12.59□□□□□ -0.39
CSTF3-203ENST00000438862 LY9Q9HBG7 655 aa12.59□□□□□ -0.39
CSTF3-203ENST00000438862 MRPS17Q9Y2R5 130 aaKnown RBP12.59□□□□□ -0.39
CSTF3-203ENST00000438862 FASNP49327 2511 aaKnown RBP12.59□□□□□ -0.39
CSTF3-203ENST00000438862 LCE2BO14633 110 aa12.58□□□□□ -0.4
CSTF3-203ENST00000438862 NRP1O14786 923 aa12.58□□□□□ -0.4
CSTF3-203ENST00000438862 FGFR4P22455 802 aa12.58□□□□□ -0.4
CSTF3-203ENST00000438862 ZNF852Q6ZMS4 543 aa12.58□□□□□ -0.4
CSTF3-203ENST00000438862 LRRC71Q8N4P6 559 aa12.58□□□□□ -0.4
CSTF3-203ENST00000438862 NLRP7Q8WX94 980 aa12.58□□□□□ -0.4
CSTF3-203ENST00000438862 HERC2P3Q9BVR0 1158 aa12.58□□□□□ -0.4
CSTF3-203ENST00000438862 INO80BQ9C086 356 aaPredicted RBP12.58□□□□□ -0.4
CSTF3-203ENST00000438862 OSBPL3Q9H4L5 887 aa12.58□□□□□ -0.4
CSTF3-203ENST00000438862 NRBP2Q9NSY0 501 aa12.58□□□□□ -0.4
CSTF3-203ENST00000438862 FAM217BQ9NTX9 383 aaPredicted RBP12.58□□□□□ -0.4
CSTF3-203ENST00000438862 FAM105AQ9NUU6 356 aa12.58□□□□□ -0.4
CSTF3-203ENST00000438862 CDH7Q9ULB5 785 aa12.58□□□□□ -0.4
CSTF3-203ENST00000438862 SOBPA7XYQ1 873 aa12.57□□□□□ -0.4
CSTF3-203ENST00000438862 DHX15O43143 795 aaKnown RBP12.57□□□□□ -0.4
CSTF3-203ENST00000438862 DDAH1O94760 285 aa12.57□□□□□ -0.4
CSTF3-203ENST00000438862 DDHD2O94830 711 aa12.57□□□□□ -0.4
CSTF3-203ENST00000438862 PSAPP07602 524 aa12.57□□□□□ -0.4
CSTF3-203ENST00000438862 SPATA31D3P0C874 917 aa12.57□□□□□ -0.4
CSTF3-203ENST00000438862 CD72P21854 359 aa12.57□□□□□ -0.4
CSTF3-203ENST00000438862 SFPQP23246 707 aaKnown RBP eCLIP12.57□□□□□ -0.4
CSTF3-203ENST00000438862 TARSP26639 723 aaKnown RBP12.57□□□□□ -0.4
CSTF3-203ENST00000438862 ZNF76P36508 570 aa12.57□□□□□ -0.4
CSTF3-203ENST00000438862 GLUD2P49448 558 aa12.57□□□□□ -0.4
CSTF3-203ENST00000438862 LIMK1P53667 647 aa12.57□□□□□ -0.4
CSTF3-203ENST00000438862 ADCY1Q08828 1119 aa12.57□□□□□ -0.4
CSTF3-203ENST00000438862 MTAPQ13126 283 aa12.57□□□□□ -0.4
CSTF3-203ENST00000438862 LPAL2Q16609 132 aa12.57□□□□□ -0.4
CSTF3-203ENST00000438862 LONRF3Q496Y0 759 aa12.57□□□□□ -0.4
CSTF3-203ENST00000438862 ZNF746Q6NUN9 644 aaPredicted RBP12.57□□□□□ -0.4
CSTF3-203ENST00000438862 SPATA31D4Q6ZUB0 917 aa12.57□□□□□ -0.4
CSTF3-203ENST00000438862 TRMT1LQ7Z2T5 733 aaKnown RBP12.57□□□□□ -0.4
CSTF3-203ENST00000438862 RALYLQ86SE5 291 aaKnown RBP12.57□□□□□ -0.4
CSTF3-203ENST00000438862 SMAP1Q8IYB5 467 aaPredicted RBP12.57□□□□□ -0.4
CSTF3-203ENST00000438862 GPR65Q8IYL9 337 aa12.57□□□□□ -0.4
CSTF3-203ENST00000438862 ST13P5Q8NFI4 369 aaPredicted RBP12.57□□□□□ -0.4
CSTF3-203ENST00000438862 ZNF668Q96K58 619 aaPredicted RBP12.57□□□□□ -0.4
CSTF3-203ENST00000438862 IER2Q9BTL4 223 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms