RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 KCNK3O14649 394 aa15.03■□□□□ -0
PTCHD3-201ENST00000438700 COPB2P35606 906 aa15.03■□□□□ -0
PTCHD3-201ENST00000438700 ERVK-9P63128 1117 aa15.03■□□□□ -0
PTCHD3-201ENST00000438700 KCTD2Q14681 263 aa15.03■□□□□ -0
PTCHD3-201ENST00000438700 ABHD15Q6UXT9 468 aa15.03■□□□□ -0
PTCHD3-201ENST00000438700 EEPD1Q7L9B9 569 aa15.03■□□□□ -0
PTCHD3-201ENST00000438700 BCAS4Q8TDM0 211 aa15.03■□□□□ -0
PTCHD3-201ENST00000438700 U2AF1L4Q8WU68 220 aaKnown RBP15.03■□□□□ -0
PTCHD3-201ENST00000438700 MMP19Q99542 508 aa15.03■□□□□ -0
PTCHD3-201ENST00000438700 GPRC5CQ9NQ84 441 aa15.03■□□□□ -0
PTCHD3-201ENST00000438700 DNAJC12Q9UKB3 198 aa15.03■□□□□ -0
PTCHD3-201ENST00000438700 PNMA3Q9UL41 463 aa15.03■□□□□ -0
PTCHD3-201ENST00000438700 FAM169AQ9Y6X4 670 aa15.03■□□□□ -0
PTCHD3-201ENST00000438700 MCM3APO60318 1980 aa15.03■□□□□ -0
PTCHD3-201ENST00000438700 UBA1P22314 1058 aaKnown RBP15.03■□□□□ -0
PTCHD3-201ENST00000438700 DRAP1Q14919 205 aaPredicted RBP15.03■□□□□ -0
PTCHD3-201ENST00000438700 MIS18BP1Q6P0N0 1132 aa15.03■□□□□ -0
PTCHD3-201ENST00000438700 VPS36Q86VN1 386 aa15.03■□□□□ -0
PTCHD3-201ENST00000438700 GLYCTKQ8IVS8 523 aa15.03■□□□□ -0
PTCHD3-201ENST00000438700 ZNF526Q8TF50 670 aaPredicted RBP15.03■□□□□ -0
PTCHD3-201ENST00000438700 MS4A4AQ96JQ5 239 aa15.03■□□□□ -0
PTCHD3-201ENST00000438700 FGD4Q96M96 766 aa15.03■□□□□ -0
PTCHD3-201ENST00000438700 MKNK1Q9BUB5 465 aa15.03■□□□□ -0
PTCHD3-201ENST00000438700 DMAC2Q9NW81 257 aa15.03■□□□□ -0
PTCHD3-201ENST00000438700 LARSQ9P2J5 1176 aaKnown RBP15.03■□□□□ -0
PTCHD3-201ENST00000438700 A0A087WUV0 522 aaPredicted RBP15.02■□□□□ -0
PTCHD3-201ENST00000438700 CCL15-CCL14A0A0B4J2E2 113 aa15.02■□□□□ -0
PTCHD3-201ENST00000438700 PDHXO00330 501 aa15.02■□□□□ -0
PTCHD3-201ENST00000438700 SHOX2O60902 331 aaPredicted RBP15.02■□□□□ -0
PTCHD3-201ENST00000438700 PPP1R37O75864 691 aa15.02■□□□□ -0
PTCHD3-201ENST00000438700 STBD1O95210 358 aa15.02■□□□□ -0
PTCHD3-201ENST00000438700 CELF2O95319 508 aaKnown RBP15.02■□□□□ -0
PTCHD3-201ENST00000438700 GLI1P08151 1106 aa15.02■□□□□ -0
PTCHD3-201ENST00000438700 SUPT20HL2P0C7V6 817 aa15.02■□□□□ -0
PTCHD3-201ENST00000438700 CETPP11597 493 aa15.02■□□□□ -0
PTCHD3-201ENST00000438700 PLS3P13797 630 aa15.02■□□□□ -0
PTCHD3-201ENST00000438700 STAT1P42224 750 aa15.02■□□□□ -0
PTCHD3-201ENST00000438700 DLG4P78352 724 aa15.02■□□□□ -0
PTCHD3-201ENST00000438700 MYL7Q01449 175 aa15.02■□□□□ -0
PTCHD3-201ENST00000438700 PRKCEQ02156 737 aa15.02■□□□□ -0
PTCHD3-201ENST00000438700 PPARDQ03181 441 aa15.02■□□□□ -0
PTCHD3-201ENST00000438700 NFIL3Q16649 462 aa15.02■□□□□ -0
PTCHD3-201ENST00000438700 CCL15Q16663 113 aa15.02■□□□□ -0
PTCHD3-201ENST00000438700 ARHGAP44Q17R89 818 aa15.02■□□□□ -0
PTCHD3-201ENST00000438700 C10orf76Q5T2E6 689 aa15.02■□□□□ -0
PTCHD3-201ENST00000438700 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.02■□□□□ -0
PTCHD3-201ENST00000438700 ARL8AQ96BM9 186 aa15.02■□□□□ -0
PTCHD3-201ENST00000438700 KRT12Q99456 494 aa15.02■□□□□ -0
PTCHD3-201ENST00000438700 GRIN2DO15399 1336 aa15.02□□□□□ -0.01
PTCHD3-201ENST00000438700 LRRN2O75325 713 aa15.02□□□□□ -0.01
PTCHD3-201ENST00000438700 SOX5P35711 763 aa15.02□□□□□ -0.01
PTCHD3-201ENST00000438700 FKBP1BP68106 108 aa15.02□□□□□ -0.01
PTCHD3-201ENST00000438700 BFSP1Q12934 665 aa15.02□□□□□ -0.01
PTCHD3-201ENST00000438700 RPS6KA1Q15418 735 aa15.02□□□□□ -0.01
PTCHD3-201ENST00000438700 KCTD19Q17RG1 926 aaPredicted RBP15.02□□□□□ -0.01
PTCHD3-201ENST00000438700 FAM102BQ5T8I3 360 aa15.02□□□□□ -0.01
PTCHD3-201ENST00000438700 OTUD6AQ7L8S5 288 aa15.02□□□□□ -0.01
PTCHD3-201ENST00000438700 TSEN2Q8NCE0 465 aaKnown RBP15.02□□□□□ -0.01
PTCHD3-201ENST00000438700 TAF4BQ92750 862 aa15.02□□□□□ -0.01
PTCHD3-201ENST00000438700 CEP170P1Q96L14 293 aa15.02□□□□□ -0.01
PTCHD3-201ENST00000438700 STRA6Q9BX79 667 aa15.02□□□□□ -0.01
PTCHD3-201ENST00000438700 INTS2Q9H0H0 1204 aaKnown RBP15.02□□□□□ -0.01
PTCHD3-201ENST00000438700 PORCNQ9H237 461 aa15.02□□□□□ -0.01
PTCHD3-201ENST00000438700 MROH8Q9H579 483 aa15.02□□□□□ -0.01
PTCHD3-201ENST00000438700 BTBD19C9JJ37 291 aa15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 DKC1O60832 514 aaKnown RBP eCLIP15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 FERP16591 822 aa15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 GTF2A2P52657 109 aa15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 GNGT1P63211 74 aa15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 LRRC57Q8N9N7 239 aa15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 ZSWIM2Q8NEG5 633 aa15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 LNX1Q8TBB1 728 aaPredicted RBP15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 BRI3BPQ8WY22 251 aa15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 CBWD1Q9BRT8 395 aa15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 TIPINQ9BVW5 301 aa15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 SEPT9Q9UHD8 586 aaPredicted RBP15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 SYNGAP1Q96PV0 1343 aa15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 IGSF9BQ9UPX0 1349 aa15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 DNAJC25-GNG10A0A024R161 153 aa15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 ERLIN2O94905 339 aa15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 HEXIM1O94992 359 aaKnown RBP15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 H2AFZP0C0S5 128 aa15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 H2AFVQ71UI9 128 aa15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 SH2D3CQ8N5H7 860 aa15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 C2orf69Q8N8R5 385 aa15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 GPATCH11Q8N954 259 aa15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 CAPS2Q9BXY5 557 aa15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 SEPT11Q9NVA2 429 aaKnown RBP15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 RNF14Q9UBS8 474 aa15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 APEX2Q9UBZ4 518 aa15.01□□□□□ -0.01
PTCHD3-201ENST00000438700 BTNL10A8MVZ5 291 aa15□□□□□ -0.01
PTCHD3-201ENST00000438700 KIF4AO95239 1232 aa15□□□□□ -0.01
PTCHD3-201ENST00000438700 CPP00450 1065 aa15□□□□□ -0.01
PTCHD3-201ENST00000438700 ABCB4P21439 1286 aa15□□□□□ -0.01
PTCHD3-201ENST00000438700 PEX3P56589 373 aa15□□□□□ -0.01
PTCHD3-201ENST00000438700 GUCY2DQ02846 1103 aa15□□□□□ -0.01
PTCHD3-201ENST00000438700 KCTD16Q68DU8 428 aa15□□□□□ -0.01
PTCHD3-201ENST00000438700 KLHL7Q8IXQ5 586 aa15□□□□□ -0.01
PTCHD3-201ENST00000438700 TPCN2Q8NHX9 752 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms