RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 ERVH48-1M5A8F1 160 aa12.79□□□□□ -0.36
RTN4-211ENST00000438462 CCL16O15467 120 aa12.79□□□□□ -0.36
RTN4-211ENST00000438462 FCARP24071 287 aa12.79□□□□□ -0.36
RTN4-211ENST00000438462 GBP1P32455 592 aa12.79□□□□□ -0.36
RTN4-211ENST00000438462 CRYBB1P53674 252 aaPredicted RBP12.79□□□□□ -0.36
RTN4-211ENST00000438462 PPARAQ07869 468 aa12.79□□□□□ -0.36
RTN4-211ENST00000438462 KARSQ15046 597 aaKnown RBP12.79□□□□□ -0.36
RTN4-211ENST00000438462 QRICH1Q2TAL8 776 aa12.79□□□□□ -0.36
RTN4-211ENST00000438462 C4orf17Q53FE4 359 aa12.79□□□□□ -0.36
RTN4-211ENST00000438462 DGKKQ5KSL6 1271 aa12.79□□□□□ -0.36
RTN4-211ENST00000438462 PKN3Q6P5Z2 889 aa12.79□□□□□ -0.36
RTN4-211ENST00000438462 TAS1R1Q7RTX1 841 aa12.79□□□□□ -0.36
RTN4-211ENST00000438462 FMNL3Q8IVF7 1028 aa12.79□□□□□ -0.36
RTN4-211ENST00000438462 MAP4K3Q8IVH8 894 aa12.79□□□□□ -0.36
RTN4-211ENST00000438462 MCRS1Q96EZ8 462 aa12.79□□□□□ -0.36
RTN4-211ENST00000438462 TRMT61BQ9BVS5 477 aaKnown RBP12.79□□□□□ -0.36
RTN4-211ENST00000438462 BOLA2Q9H3K6 86 aa12.79□□□□□ -0.36
RTN4-211ENST00000438462 IL1RAPL2Q9NP60 686 aa12.79□□□□□ -0.36
RTN4-211ENST00000438462 RTEL1Q9NZ71 1219 aa12.79□□□□□ -0.36
RTN4-211ENST00000438462 EVPLQ92817 2033 aa12.79□□□□□ -0.36
RTN4-211ENST00000438462 CREBBPQ92793 2442 aa12.79□□□□□ -0.36
RTN4-211ENST00000438462 NOTCH2Q04721 2471 aa12.79□□□□□ -0.36
RTN4-211ENST00000438462 SNHG28P0DPA3 235 aa12.78□□□□□ -0.36
RTN4-211ENST00000438462 ENGP17813 658 aa12.78□□□□□ -0.36
RTN4-211ENST00000438462 GDI1P31150 447 aa12.78□□□□□ -0.36
RTN4-211ENST00000438462 LONRF3Q496Y0 759 aa12.78□□□□□ -0.36
RTN4-211ENST00000438462 TRIM61Q5EBN2 209 aa12.78□□□□□ -0.36
RTN4-211ENST00000438462 RRP12Q5JTH9 1297 aaKnown RBP12.78□□□□□ -0.36
RTN4-211ENST00000438462 ZSCAN25Q6NSZ9 544 aa12.78□□□□□ -0.36
RTN4-211ENST00000438462 PRICKLE2Q7Z3G6 844 aa12.78□□□□□ -0.36
RTN4-211ENST00000438462 KIAA0319LQ8IZA0 1049 aa12.78□□□□□ -0.36
RTN4-211ENST00000438462 HDDC3Q8N4P3 179 aa12.78□□□□□ -0.36
RTN4-211ENST00000438462 SEPT1Q8WYJ6 367 aa12.78□□□□□ -0.36
RTN4-211ENST00000438462 LPPQ93052 612 aa12.78□□□□□ -0.36
RTN4-211ENST00000438462 SENP7Q9BQF6 1050 aa12.78□□□□□ -0.36
RTN4-211ENST00000438462 TRPV5Q9NQA5 729 aa12.78□□□□□ -0.36
RTN4-211ENST00000438462 HCFC1R1Q9NWW0 138 aa12.78□□□□□ -0.36
RTN4-211ENST00000438462 MGAQ8IWI9 3026 aa12.78□□□□□ -0.36
RTN4-211ENST00000438462 VWA8A3KMH1 1905 aa12.78□□□□□ -0.36
RTN4-211ENST00000438462 ADAMTS9Q9P2N4 1935 aa12.78□□□□□ -0.36
RTN4-211ENST00000438462 THADAQ6YHU6 1953 aa12.78□□□□□ -0.36
RTN4-211ENST00000438462 GPAA1O43292 621 aa12.77□□□□□ -0.37
RTN4-211ENST00000438462 RANBP6O60518 1105 aaKnown RBP12.77□□□□□ -0.37
RTN4-211ENST00000438462 SOX9P48436 509 aa12.77□□□□□ -0.37
RTN4-211ENST00000438462 CCDC184Q52MB2 194 aa12.77□□□□□ -0.37
RTN4-211ENST00000438462 NOMO2Q5JPE7 1267 aa12.77□□□□□ -0.37
RTN4-211ENST00000438462 PMS2CLQ68D20 193 aa12.77□□□□□ -0.37
RTN4-211ENST00000438462 LILRA6Q6PI73 481 aa12.77□□□□□ -0.37
RTN4-211ENST00000438462 POTEHQ6S545 545 aa12.77□□□□□ -0.37
RTN4-211ENST00000438462 PPP4R3CPQ6ZMV5 832 aa12.77□□□□□ -0.37
RTN4-211ENST00000438462 MARCH9Q86YJ5 346 aa12.77□□□□□ -0.37
RTN4-211ENST00000438462 IFNL3Q8IZI9 196 aa12.77□□□□□ -0.37
RTN4-211ENST00000438462 EVLQ9UI08 416 aaPredicted RBP12.77□□□□□ -0.37
RTN4-211ENST00000438462 MBD1Q9UIS9 605 aaPredicted RBP12.77□□□□□ -0.37
RTN4-211ENST00000438462 TRABD2BA6NFA1 517 aa12.76□□□□□ -0.37
RTN4-211ENST00000438462 C1RP00736 705 aa12.76□□□□□ -0.37
RTN4-211ENST00000438462 C6P13671 934 aa12.76□□□□□ -0.37
RTN4-211ENST00000438462 HNRNPDQ14103 355 aaKnown RBP12.76□□□□□ -0.37
RTN4-211ENST00000438462 TRIP6Q15654 476 aaKnown RBP12.76□□□□□ -0.37
RTN4-211ENST00000438462 PABPC1LQ4VXU2 614 aaKnown RBP12.76□□□□□ -0.37
RTN4-211ENST00000438462 PPM1LQ5SGD2 360 aa12.76□□□□□ -0.37
RTN4-211ENST00000438462 PDXDC1Q6P996 788 aa12.76□□□□□ -0.37
RTN4-211ENST00000438462 TXNDC11Q6PKC3 985 aa12.76□□□□□ -0.37
RTN4-211ENST00000438462 LRRC69Q6ZNQ3 347 aa12.76□□□□□ -0.37
RTN4-211ENST00000438462 FCHSD1Q86WN1 690 aa12.76□□□□□ -0.37
RTN4-211ENST00000438462 ADGRF4Q8IZF3 695 aa12.76□□□□□ -0.37
RTN4-211ENST00000438462 RSPH1Q8WYR4 309 aa12.76□□□□□ -0.37
RTN4-211ENST00000438462 CAMK1GQ96NX5 476 aa12.76□□□□□ -0.37
RTN4-211ENST00000438462 PCYT2Q99447 389 aa12.76□□□□□ -0.37
RTN4-211ENST00000438462 NUSAP1Q9BXS6 441 aaKnown RBP12.76□□□□□ -0.37
RTN4-211ENST00000438462 MARCH5Q9NX47 278 aa12.76□□□□□ -0.37
RTN4-211ENST00000438462 FBXW11Q9UKB1 542 aa12.76□□□□□ -0.37
RTN4-211ENST00000438462 KCNH3Q9ULD8 1083 aa12.76□□□□□ -0.37
RTN4-211ENST00000438462 SLC8A2Q9UPR5 921 aa12.76□□□□□ -0.37
RTN4-211ENST00000438462 SALL3Q9BXA9 1300 aa12.76□□□□□ -0.37
RTN4-211ENST00000438462 TNRC6BQ9UPQ9 1833 aaKnown RBP12.76□□□□□ -0.37
RTN4-211ENST00000438462 SLC38A8A6NNN8 435 aa12.75□□□□□ -0.37
RTN4-211ENST00000438462 MEIS3P2A8K0S8 358 aa12.75□□□□□ -0.37
RTN4-211ENST00000438462 NRG2O14511 850 aaPredicted RBP12.75□□□□□ -0.37
RTN4-211ENST00000438462 XYLBO75191 536 aa12.75□□□□□ -0.37
RTN4-211ENST00000438462 STAM2O75886 525 aa12.75□□□□□ -0.37
RTN4-211ENST00000438462 VTNP04004 478 aa12.75□□□□□ -0.37
RTN4-211ENST00000438462 C8AP07357 584 aa12.75□□□□□ -0.37
RTN4-211ENST00000438462 HNRNPA1P09651 372 aaKnown RBP eCLIP12.75□□□□□ -0.373e-6■□□□□ 10.5
RTN4-211ENST00000438462 RPL17P18621 184 aaKnown RBP12.75□□□□□ -0.37
RTN4-211ENST00000438462 KLRC1P26715 233 aa12.75□□□□□ -0.37
RTN4-211ENST00000438462 IL12RB1P42701 662 aa12.75□□□□□ -0.37
RTN4-211ENST00000438462 DSG1Q02413 1049 aa12.75□□□□□ -0.37
RTN4-211ENST00000438462 CCINQ13939 588 aa12.75□□□□□ -0.37
RTN4-211ENST00000438462 GPATCH4Q5T3I0 446 aaKnown RBP12.75□□□□□ -0.37
RTN4-211ENST00000438462 LIN9Q5TKA1 542 aa12.75□□□□□ -0.37
RTN4-211ENST00000438462 GLB1LQ6UWU2 654 aa12.75□□□□□ -0.37
RTN4-211ENST00000438462 TOGARAM2Q6ZUX3 1019 aa12.75□□□□□ -0.37
RTN4-211ENST00000438462 RNF168Q8IYW5 571 aaPredicted RBP12.75□□□□□ -0.37
RTN4-211ENST00000438462 PIGKQ92643 395 aa12.75□□□□□ -0.37
RTN4-211ENST00000438462 OSBP2Q969R2 916 aa12.75□□□□□ -0.37
RTN4-211ENST00000438462 MSANTD3Q96H12 275 aa12.75□□□□□ -0.37
RTN4-211ENST00000438462 HHIPQ96QV1 700 aa12.75□□□□□ -0.37
RTN4-211ENST00000438462 RNF39Q9H2S5 420 aa12.75□□□□□ -0.37
RTN4-211ENST00000438462 GDE1Q9NZC3 331 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms