RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 CSDE1O75534 798 aaKnown RBP8.68□□□□□ -1.02
VPS50-204ENST00000438395 SP100P23497 879 aaPredicted RBP8.68□□□□□ -1.02
VPS50-204ENST00000438395 CYP3A7P24462 503 aa8.68□□□□□ -1.02
VPS50-204ENST00000438395 RFC5P40937 340 aa8.68□□□□□ -1.02
VPS50-204ENST00000438395 PHKA2P46019 1235 aa8.68□□□□□ -1.02
VPS50-204ENST00000438395 QARSP47897 775 aaKnown RBP8.68□□□□□ -1.02
VPS50-204ENST00000438395 BCAR1P56945 870 aa8.68□□□□□ -1.02
VPS50-204ENST00000438395 ZXDAP98168 799 aa8.68□□□□□ -1.02
VPS50-204ENST00000438395 RBM10P98175 930 aaKnown RBP8.68□□□□□ -1.02
VPS50-204ENST00000438395 NHLH1Q02575 133 aa8.68□□□□□ -1.02
VPS50-204ENST00000438395 ITIH3Q06033 890 aa8.68□□□□□ -1.02
VPS50-204ENST00000438395 NCBP1Q09161 790 aaKnown RBP8.68□□□□□ -1.02
VPS50-204ENST00000438395 TOB2Q14106 344 aaPredicted RBP8.68□□□□□ -1.02
VPS50-204ENST00000438395 TARBP2Q15633 366 aaKnown RBP8.68□□□□□ -1.02
VPS50-204ENST00000438395 LONRF3Q496Y0 759 aa8.68□□□□□ -1.02
VPS50-204ENST00000438395 NOMO2Q5JPE7 1267 aa8.68□□□□□ -1.02
VPS50-204ENST00000438395 PLA2G4FQ68DD2 849 aa8.68□□□□□ -1.02
VPS50-204ENST00000438395 ELMSAN1Q6PJG2 1045 aa8.68□□□□□ -1.02
VPS50-204ENST00000438395 OTUD6AQ7L8S5 288 aa8.68□□□□□ -1.02
VPS50-204ENST00000438395 NEK8Q86SG6 692 aa8.68□□□□□ -1.02
VPS50-204ENST00000438395 ALYREFQ86V81 257 aaKnown RBP8.68□□□□□ -1.02
VPS50-204ENST00000438395 SLC39A11Q8N1S5 342 aa8.68□□□□□ -1.02
VPS50-204ENST00000438395 VN1R2Q8NFZ6 395 aa8.68□□□□□ -1.02
VPS50-204ENST00000438395 PSPC1Q8WXF1 523 aaKnown RBP8.68□□□□□ -1.02
VPS50-204ENST00000438395 PGBD4Q96DM1 585 aa8.68□□□□□ -1.02
VPS50-204ENST00000438395 CEP170P1Q96L14 293 aa8.68□□□□□ -1.02
VPS50-204ENST00000438395 MRGPRX2Q96LB1 330 aa8.68□□□□□ -1.02
VPS50-204ENST00000438395 FBXL18Q96ME1 805 aa8.68□□□□□ -1.02
VPS50-204ENST00000438395 RIPOR3Q96MK2 946 aa8.68□□□□□ -1.02
VPS50-204ENST00000438395 FAM193BQ96PV7 902 aaPredicted RBP8.68□□□□□ -1.02
VPS50-204ENST00000438395 FDXACB1Q9BRP7 624 aaPredicted RBP8.68□□□□□ -1.02
VPS50-204ENST00000438395 NIFKQ9BYG3 293 aaKnown RBP8.68□□□□□ -1.02
VPS50-204ENST00000438395 TM6SF1Q9BZW5 370 aa8.68□□□□□ -1.02
VPS50-204ENST00000438395 STK39Q9UEW8 545 aa8.68□□□□□ -1.02
VPS50-204ENST00000438395 PPME1Q9Y570 386 aa8.68□□□□□ -1.02
VPS50-204ENST00000438395 COL4A3BPQ9Y5P4 624 aa8.68□□□□□ -1.02
VPS50-204ENST00000438395 TTC24A2A3L6 582 aaPredicted RBP8.67□□□□□ -1.02
VPS50-204ENST00000438395 TMEM150BA6NC51 233 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 C2orf71A6NGG8 1288 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 GAS2O43903 313 aaKnown RBP8.67□□□□□ -1.02
VPS50-204ENST00000438395 CCNT1O60563 726 aaKnown RBP8.67□□□□□ -1.02
VPS50-204ENST00000438395 MAFO75444 373 aaPredicted RBP8.67□□□□□ -1.02
VPS50-204ENST00000438395 ERLIN2O94905 339 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 BAG4O95429 457 aaKnown RBP8.67□□□□□ -1.02
VPS50-204ENST00000438395 CXCL14O95715 111 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 MTHFRP42898 656 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 MRE11P49959 708 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 SIGLEC14Q08ET2 396 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 PPP2R5CQ13362 524 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 DRP2Q13474 957 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 GIT2Q14161 759 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 ANKRD1Q15327 319 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 PTPN21Q16825 1174 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 TMEM184AQ6ZMB5 413 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 LRRC55Q6ZSA7 311 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 CABP7Q86V35 215 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 HACE1Q8IYU2 909 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 VPS52Q8N1B4 723 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 FBXL6Q8N531 539 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 MRPL43Q8N983 215 aaKnown RBP8.67□□□□□ -1.02
VPS50-204ENST00000438395 TDRD5Q8NAT2 981 aaKnown RBP8.67□□□□□ -1.02
VPS50-204ENST00000438395 PRR7Q8TB68 274 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 ETNPPLQ8TBG4 499 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 TCP11Q8WWU5 503 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 SUSD6Q92537 303 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 SH2D3AQ9BRG2 576 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 CYP26B1Q9NR63 512 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 FAM105AQ9NUU6 356 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 RNF19AQ9NV58 838 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 DACH1Q9UI36 760 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 KCNJ14Q9UNX9 436 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 HCFC2Q9Y5Z7 792 aa8.67□□□□□ -1.02
VPS50-204ENST00000438395 STK36Q9NRP7 1315 aa8.66□□□□□ -1.02
VPS50-204ENST00000438395 CNTNAP2Q9UHC6 1331 aa8.66□□□□□ -1.02
VPS50-204ENST00000438395 NT5C1B-RDH14C9J2C7 533 aa8.66□□□□□ -1.02
VPS50-204ENST00000438395 WNT7AO00755 349 aa8.66□□□□□ -1.02
VPS50-204ENST00000438395 SLC37A4O43826 429 aa8.66□□□□□ -1.02
VPS50-204ENST00000438395 P4HBP07237 508 aaKnown RBP8.66□□□□□ -1.02
VPS50-204ENST00000438395 SRGAP2CP0DJJ0 459 aa8.66□□□□□ -1.02
VPS50-204ENST00000438395 MTMR3Q13615 1198 aa8.66□□□□□ -1.02
VPS50-204ENST00000438395 TRIM29Q14134 588 aa8.66□□□□□ -1.02
VPS50-204ENST00000438395 TFDP1Q14186 410 aa8.66□□□□□ -1.02
VPS50-204ENST00000438395 EMC2Q15006 297 aa8.66□□□□□ -1.02
VPS50-204ENST00000438395 XKR9Q5GH70 373 aa8.66□□□□□ -1.02
VPS50-204ENST00000438395 RARS2Q5T160 578 aaKnown RBP8.66□□□□□ -1.02
VPS50-204ENST00000438395 NCAPH2Q6IBW4 605 aa8.66□□□□□ -1.02
VPS50-204ENST00000438395 SYCE2Q6PIF2 218 aa8.66□□□□□ -1.02
VPS50-204ENST00000438395 PIK3AP1Q6ZUJ8 805 aa8.66□□□□□ -1.02
VPS50-204ENST00000438395 ANO5Q75V66 913 aa8.66□□□□□ -1.02
VPS50-204ENST00000438395 BMP8AQ7Z5Y6 402 aa8.66□□□□□ -1.02
VPS50-204ENST00000438395 PPFIBP1Q86W92 1011 aa8.66□□□□□ -1.02
VPS50-204ENST00000438395 SLFN12Q8IYM2 578 aa8.66□□□□□ -1.02
VPS50-204ENST00000438395 LPPQ93052 612 aa8.66□□□□□ -1.02
VPS50-204ENST00000438395 MBOAT7Q96N66 472 aa8.66□□□□□ -1.02
VPS50-204ENST00000438395 AIFM3Q96NN9 605 aa8.66□□□□□ -1.02
VPS50-204ENST00000438395 LXNQ9BS40 222 aa8.66□□□□□ -1.02
VPS50-204ENST00000438395 TRAIPQ9BWF2 469 aa8.66□□□□□ -1.02
VPS50-204ENST00000438395 EMILIN2Q9BXX0 1053 aa8.66□□□□□ -1.02
VPS50-204ENST00000438395 ADAM7Q9H2U9 754 aa8.66□□□□□ -1.02
VPS50-204ENST00000438395 AGPAT5Q9NUQ2 364 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms