RNA–Protein interactions for RNA: ENST00000438120.5

PTPRF-209, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRF, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-209ENST00000438120 UBA6A0AVT1 1052 aaPredicted RBP18.25■□□□□ 0.51
PTPRF-209ENST00000438120 NAA30Q147X3 362 aaPredicted RBP18.25■□□□□ 0.51
PTPRF-209ENST00000438120 CYP26B1Q9NR63 512 aa18.25■□□□□ 0.51
PTPRF-209ENST00000438120 ANGPTL2Q9UKU9 493 aa18.25■□□□□ 0.51
PTPRF-209ENST00000438120 A0A087WUV0 522 aaPredicted RBP18.25■□□□□ 0.51
PTPRF-209ENST00000438120 H3BRJ5 948 aa18.25■□□□□ 0.51
PTPRF-209ENST00000438120 GYG2O15488 501 aa18.25■□□□□ 0.51
PTPRF-209ENST00000438120 CDH6P55285 790 aa18.25■□□□□ 0.51
PTPRF-209ENST00000438120 IMPG1Q17R60 797 aa18.25■□□□□ 0.51
PTPRF-209ENST00000438120 ELMSAN1Q6PJG2 1045 aa18.25■□□□□ 0.51
PTPRF-209ENST00000438120 MICALL2Q8IY33 904 aa18.25■□□□□ 0.51
PTPRF-209ENST00000438120 SCG3Q8WXD2 468 aaKnown RBP18.25■□□□□ 0.51
PTPRF-209ENST00000438120 PIDD1Q9HB75 910 aa18.25■□□□□ 0.51
PTPRF-209ENST00000438120 JPH1Q9HDC5 661 aaPredicted RBP18.25■□□□□ 0.51
PTPRF-209ENST00000438120 ZBTB12Q9Y330 459 aaPredicted RBP18.25■□□□□ 0.51
PTPRF-209ENST00000438120 CCDC137Q6PK04 289 aaKnown RBP18.24■□□□□ 0.51
PTPRF-209ENST00000438120 TAS2R42Q7RTR8 314 aa18.24■□□□□ 0.51
PTPRF-209ENST00000438120 TBC1D16Q8TBP0 767 aa18.24■□□□□ 0.51
PTPRF-209ENST00000438120 RAPGEF5Q92565 580 aa18.24■□□□□ 0.51
PTPRF-209ENST00000438120 PIN4Q9Y237 131 aaKnown RBP18.24■□□□□ 0.51
PTPRF-209ENST00000438120 ATP1A1P05023 1023 aaKnown RBP18.24■□□□□ 0.51
PTPRF-209ENST00000438120 HSPA8P11142 646 aaKnown RBP18.24■□□□□ 0.51
PTPRF-209ENST00000438120 ACOT2P49753 483 aa18.24■□□□□ 0.51
PTPRF-209ENST00000438120 OR6P1Q8NGX9 317 aa18.24■□□□□ 0.51
PTPRF-209ENST00000438120 ORC4O43929 436 aa18.24■□□□□ 0.51
PTPRF-209ENST00000438120 ARHGDIAP52565 204 aa18.24■□□□□ 0.51
PTPRF-209ENST00000438120 LBRQ14739 615 aaKnown RBP18.24■□□□□ 0.51
PTPRF-209ENST00000438120 FASTKD5Q7L8L6 764 aaKnown RBP18.24■□□□□ 0.51
PTPRF-209ENST00000438120 GUF1Q8N442 669 aaKnown RBP18.24■□□□□ 0.51
PTPRF-209ENST00000438120 GIPC2Q8TF65 315 aa18.24■□□□□ 0.51
PTPRF-209ENST00000438120 BPIFA3Q9BQP9 254 aa18.24■□□□□ 0.51
PTPRF-209ENST00000438120 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.24■□□□□ 0.515e-8■■■■□ 22.3
PTPRF-209ENST00000438120 USP11P51784 963 aa18.24■□□□□ 0.51
PTPRF-209ENST00000438120 ULK4Q96C45 1275 aa18.24■□□□□ 0.51
PTPRF-209ENST00000438120 CCDC124Q96CT7 223 aaKnown RBP18.24■□□□□ 0.51
PTPRF-209ENST00000438120 ASIC4Q96FT7 647 aa18.24■□□□□ 0.51
PTPRF-209ENST00000438120 ADGRG1Q9Y653 693 aa18.24■□□□□ 0.51
PTPRF-209ENST00000438120 F8W8V4 182 aa18.24■□□□□ 0.51
PTPRF-209ENST00000438120 DIAPH2O60879 1101 aa18.24■□□□□ 0.51
PTPRF-209ENST00000438120 STAT5BP51692 787 aa18.24■□□□□ 0.51
PTPRF-209ENST00000438120 SLC30A5Q8TAD4 765 aa18.24■□□□□ 0.51
PTPRF-209ENST00000438120 EGFL8Q99944 293 aa18.24■□□□□ 0.51
PTPRF-209ENST00000438120 SEL1LQ9UBV2 794 aa18.24■□□□□ 0.51
PTPRF-209ENST00000438120 DAGLAQ9Y4D2 1042 aa18.24■□□□□ 0.51
PTPRF-209ENST00000438120 ATP9BO43861 1147 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 NFKBIAP25963 317 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 PDCD2Q16342 344 aaPredicted RBP18.23■□□□□ 0.51
PTPRF-209ENST00000438120 CEP55Q53EZ4 464 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 TTC8Q8TAM2 541 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 CTSHP09668 335 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 TMEM62Q0P6H9 643 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 KLHL38Q2WGJ6 581 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 WDR72Q3MJ13 1102 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 MFSD14CQ5VZR4 134 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 ZFP69BQ9UJL9 534 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 L3MBTL1Q9Y468 752 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 SHROOM2Q13796 1616 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 ARHGAP31Q2M1Z3 1444 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 COPB2P35606 906 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 DUOXA2Q1HG44 320 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 GJD4Q96KN9 370 aaPredicted RBP18.23■□□□□ 0.51
PTPRF-209ENST00000438120 DCTN3O75935 186 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 RCAN1P53805 252 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 POLE2P56282 527 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 EPHA7Q15375 998 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 BTBD8Q5XKL5 378 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 OR6J1Q8NGC5 347 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 SCOCQ9UIL1 159 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 E2F6O75461 281 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 KRT7P08729 469 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 RHOT1Q8IXI2 618 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 DPF2Q92785 391 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 ACTR5Q9H9F9 607 aaPredicted RBP18.23■□□□□ 0.51
PTPRF-209ENST00000438120 ALG13Q9NP73 1137 aaKnown RBP18.23■□□□□ 0.51
PTPRF-209ENST00000438120 DONSONQ9NYP3 566 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 THEGQ9P2T0 379 aa18.23■□□□□ 0.51
PTPRF-209ENST00000438120 OVOS2A0A0G2JMS6 1433 aa18.22■□□□□ 0.51
PTPRF-209ENST00000438120 OVOS2A0A0J9YW53 1432 aa18.22■□□□□ 0.51
PTPRF-209ENST00000438120 KPNA7A9QM74 516 aa18.22■□□□□ 0.51
PTPRF-209ENST00000438120 POLRMTO00411 1230 aaKnown RBP18.22■□□□□ 0.51
PTPRF-209ENST00000438120 PRKCBP05771 671 aa18.22■□□□□ 0.51
PTPRF-209ENST00000438120 DMTNQ08495 405 aa18.22■□□□□ 0.51
PTPRF-209ENST00000438120 OVOS2Q6IE36 1432 aa18.22■□□□□ 0.51
PTPRF-209ENST00000438120 CC2D1AQ6P1N0 951 aaPredicted RBP18.22■□□□□ 0.51
PTPRF-209ENST00000438120 ACAD11Q709F0 780 aa18.22■□□□□ 0.51
PTPRF-209ENST00000438120 MORC4Q8TE76 937 aa18.22■□□□□ 0.51
PTPRF-209ENST00000438120 SMARCA1P28370 1054 aa18.22■□□□□ 0.51
PTPRF-209ENST00000438120 PRAMEP78395 509 aa18.22■□□□□ 0.51
PTPRF-209ENST00000438120 MDM2Q00987 491 aaPredicted RBP18.22■□□□□ 0.51
PTPRF-209ENST00000438120 SGMS1Q86VZ5 419 aa18.22■□□□□ 0.51
PTPRF-209ENST00000438120 METTL16Q86W50 562 aaKnown RBP18.22■□□□□ 0.51
PTPRF-209ENST00000438120 ANKMY2Q8IV38 441 aa18.22■□□□□ 0.51
PTPRF-209ENST00000438120 ACAP3Q96P50 834 aa18.22■□□□□ 0.51
PTPRF-209ENST00000438120 ANO9A1A5B4 782 aa18.22■□□□□ 0.51
PTPRF-209ENST00000438120 BAATQ14032 418 aaPredicted RBP18.22■□□□□ 0.51
PTPRF-209ENST00000438120 NCAPHQ15003 741 aa18.22■□□□□ 0.51
PTPRF-209ENST00000438120 PDXDC1Q6P996 788 aa18.22■□□□□ 0.51
PTPRF-209ENST00000438120 NDFIP2Q9NV92 336 aa18.22■□□□□ 0.51
PTPRF-209ENST00000438120 EYA4O95677 639 aa18.22■□□□□ 0.51
PTPRF-209ENST00000438120 RGS7P49802 495 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms