RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 PRPF31Q8WWY3 499 aaKnown RBP16.69■□□□□ 0.26
SGCE-205ENST00000437425 SOCS4Q8WXH5 440 aa16.69■□□□□ 0.26
SGCE-205ENST00000437425 HHIPL1Q96JK4 782 aa16.69■□□□□ 0.26
SGCE-205ENST00000437425 MRPL4Q9BYD3 311 aaKnown RBP16.69■□□□□ 0.26
SGCE-205ENST00000437425 NFKBIZQ9BYH8 718 aa16.69■□□□□ 0.26
SGCE-205ENST00000437425 COQ4Q9Y3A0 265 aa16.69■□□□□ 0.26
SGCE-205ENST00000437425 PASKQ96RG2 1323 aa16.69■□□□□ 0.26
SGCE-205ENST00000437425 SIP14410 1827 aa16.68■□□□□ 0.26
SGCE-205ENST00000437425 ZBTB42B2RXF5 422 aa16.68■□□□□ 0.26
SGCE-205ENST00000437425 TISP43B9A030 160 aa16.68■□□□□ 0.26
SGCE-205ENST00000437425 ZC3H11AO75152 810 aaKnown RBP eCLIP16.68■□□□□ 0.26
SGCE-205ENST00000437425 LGALS2P05162 132 aa16.68■□□□□ 0.26
SGCE-205ENST00000437425 MARK3P27448 753 aa16.68■□□□□ 0.26
SGCE-205ENST00000437425 TMOD1P28289 359 aa16.68■□□□□ 0.26
SGCE-205ENST00000437425 SOX5P35711 763 aa16.68■□□□□ 0.26
SGCE-205ENST00000437425 MAGEA1P43355 309 aa16.68■□□□□ 0.26
SGCE-205ENST00000437425 LAMTOR4Q0VGL1 99 aa16.68■□□□□ 0.26
SGCE-205ENST00000437425 MAPK6Q16659 721 aa16.68■□□□□ 0.26
SGCE-205ENST00000437425 EPC2Q52LR7 807 aa16.68■□□□□ 0.26
SGCE-205ENST00000437425 IQCEQ6IPM2 695 aa16.68■□□□□ 0.26
SGCE-205ENST00000437425 IFNL1Q8IU54 200 aa16.68■□□□□ 0.26
SGCE-205ENST00000437425 TRIM58Q8NG06 486 aa16.68■□□□□ 0.26
SGCE-205ENST00000437425 COPS5Q92905 334 aa16.68■□□□□ 0.26
SGCE-205ENST00000437425 WDR24Q96S15 920 aa16.68■□□□□ 0.26
SGCE-205ENST00000437425 NAPGQ99747 312 aaPredicted RBP16.68■□□□□ 0.26
SGCE-205ENST00000437425 DNAJC12Q9UKB3 198 aa16.68■□□□□ 0.26
SGCE-205ENST00000437425 AGO2Q9UKV8 859 aaKnown RBP16.68■□□□□ 0.26
SGCE-205ENST00000437425 MCM3APO60318 1980 aa16.67■□□□□ 0.26
SGCE-205ENST00000437425 IGF2BP3O00425 579 aaKnown RBP eCLIP16.67■□□□□ 0.26
SGCE-205ENST00000437425 PLEKP08567 350 aaPredicted RBP16.67■□□□□ 0.26
SGCE-205ENST00000437425 AP3M2P53677 418 aa16.67■□□□□ 0.26
SGCE-205ENST00000437425 CLDN10P78369 228 aa16.67■□□□□ 0.26
SGCE-205ENST00000437425 PPP3CAQ08209 521 aa16.67■□□□□ 0.26
SGCE-205ENST00000437425 BMS1Q14692 1282 aaKnown RBP16.67■□□□□ 0.26
SGCE-205ENST00000437425 PSMD6Q15008 389 aa16.67■□□□□ 0.26
SGCE-205ENST00000437425 DGKDQ16760 1214 aa16.67■□□□□ 0.26
SGCE-205ENST00000437425 OLFML2BQ68BL8 750 aa16.67■□□□□ 0.26
SGCE-205ENST00000437425 C17orf99Q6UX52 265 aa16.67■□□□□ 0.26
SGCE-205ENST00000437425 ENOSF1Q7L5Y1 443 aa16.67■□□□□ 0.26
SGCE-205ENST00000437425 CBWD2Q8IUF1 395 aa16.67■□□□□ 0.26
SGCE-205ENST00000437425 LMO3Q8TAP4 145 aa16.67■□□□□ 0.26
SGCE-205ENST00000437425 SECISBP2LQ93073 1101 aaKnown RBP16.67■□□□□ 0.26
SGCE-205ENST00000437425 SUCLA2Q9P2R7 463 aaPredicted RBP16.67■□□□□ 0.26
SGCE-205ENST00000437425 CPA4Q9UI42 421 aa16.67■□□□□ 0.26
SGCE-205ENST00000437425 GUCA1BQ9UMX6 200 aa16.67■□□□□ 0.26
SGCE-205ENST00000437425 TLL2Q9Y6L7 1015 aa16.67■□□□□ 0.26
SGCE-205ENST00000437425 A0A0B4J269 797 aa16.66■□□□□ 0.26
SGCE-205ENST00000437425 ANO9A1A5B4 782 aa16.66■□□□□ 0.26
SGCE-205ENST00000437425 F8VZ95 297 aa16.66■□□□□ 0.26
SGCE-205ENST00000437425 TACC1O75410 805 aa16.66■□□□□ 0.26
SGCE-205ENST00000437425 TOM1L1O75674 476 aa16.66■□□□□ 0.26
SGCE-205ENST00000437425 ADRB2P07550 413 aa16.66■□□□□ 0.26
SGCE-205ENST00000437425 ADCYAP1R1P41586 468 aa16.66■□□□□ 0.26
SGCE-205ENST00000437425 GCLMP48507 274 aa16.66■□□□□ 0.26
SGCE-205ENST00000437425 GPC3P51654 580 aa16.66■□□□□ 0.26
SGCE-205ENST00000437425 DLG4P78352 724 aa16.66■□□□□ 0.26
SGCE-205ENST00000437425 GRM1Q13255 1194 aa16.66■□□□□ 0.26
SGCE-205ENST00000437425 SURF1Q15526 300 aa16.66■□□□□ 0.26
SGCE-205ENST00000437425 C1orf220Q5T0J3 134 aa16.66■□□□□ 0.26
SGCE-205ENST00000437425 TRIM50Q86XT4 487 aa16.66■□□□□ 0.26
SGCE-205ENST00000437425 AFG1LQ8WV93 481 aa16.66■□□□□ 0.26
SGCE-205ENST00000437425 SAAL1Q96ER3 474 aa16.66■□□□□ 0.26
SGCE-205ENST00000437425 ALS2CR12Q96Q35 445 aa16.66■□□□□ 0.26
SGCE-205ENST00000437425 FNBP1Q96RU3 617 aa16.66■□□□□ 0.26
SGCE-205ENST00000437425 TMEM117Q9H0C3 514 aa16.66■□□□□ 0.26
SGCE-205ENST00000437425 SUGCTQ9HAC7 445 aa16.66■□□□□ 0.26
SGCE-205ENST00000437425 GOLGA8IPA6NC78 632 aa16.65■□□□□ 0.26
SGCE-205ENST00000437425 GOLGA8JA6NMD2 632 aa16.65■□□□□ 0.26
SGCE-205ENST00000437425 BTNL10A8MVZ5 291 aa16.65■□□□□ 0.26
SGCE-205ENST00000437425 KIF3CO14782 793 aa16.65■□□□□ 0.26
SGCE-205ENST00000437425 CLDN3O15551 220 aa16.65■□□□□ 0.26
SGCE-205ENST00000437425 RGS2P41220 211 aa16.65■□□□□ 0.26
SGCE-205ENST00000437425 CDC42EP1Q00587 391 aa16.65■□□□□ 0.26
SGCE-205ENST00000437425 DRAP1Q14919 205 aaPredicted RBP16.65■□□□□ 0.26
SGCE-205ENST00000437425 EFCAB12Q6NXP0 572 aa16.65■□□□□ 0.26
SGCE-205ENST00000437425 SLC35F6Q8N357 371 aa16.65■□□□□ 0.26
SGCE-205ENST00000437425 FBXL13Q8NEE6 735 aa16.65■□□□□ 0.26
SGCE-205ENST00000437425 OR6J1Q8NGC5 347 aa16.65■□□□□ 0.26
SGCE-205ENST00000437425 FAM213AQ9BRX8 229 aa16.65■□□□□ 0.26
SGCE-205ENST00000437425 MSTO1Q9BUK6 570 aa16.65■□□□□ 0.26
SGCE-205ENST00000437425 CCDC113Q9H0I3 377 aa16.65■□□□□ 0.26
SGCE-205ENST00000437425 ZHX1Q9UKY1 873 aaPredicted RBP16.65■□□□□ 0.26
SGCE-205ENST00000437425 INTUQ9ULD6 942 aa16.65■□□□□ 0.26
SGCE-205ENST00000437425 Q9Y3F1 56 aa16.65■□□□□ 0.26
SGCE-205ENST00000437425 MRFAP1Q9Y605 127 aa16.65■□□□□ 0.26
SGCE-205ENST00000437425 LRRIQ3A6PVS8 624 aaPredicted RBP16.65■□□□□ 0.26
SGCE-205ENST00000437425 H3BRB1 525 aa16.65■□□□□ 0.26
SGCE-205ENST00000437425 ZNF263O14978 683 aa16.65■□□□□ 0.26
SGCE-205ENST00000437425 MFAP3P55082 362 aa16.65■□□□□ 0.26
SGCE-205ENST00000437425 CYP27A1Q02318 531 aa16.65■□□□□ 0.26
SGCE-205ENST00000437425 TNFAIP2Q03169 654 aa16.65■□□□□ 0.26
SGCE-205ENST00000437425 PTK2Q05397 1052 aa16.65■□□□□ 0.26
SGCE-205ENST00000437425 IFI16Q16666 785 aaKnown RBP16.65■□□□□ 0.26
SGCE-205ENST00000437425 IFNLR1Q8IU57 520 aaPredicted RBP16.65■□□□□ 0.26
SGCE-205ENST00000437425 RNF149Q8NC42 400 aa16.65■□□□□ 0.26
SGCE-205ENST00000437425 MNS1Q8NEH6 495 aa16.65■□□□□ 0.26
SGCE-205ENST00000437425 NPLOC4Q8TAT6 608 aa16.65■□□□□ 0.26
SGCE-205ENST00000437425 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.65■□□□□ 0.26
SGCE-205ENST00000437425 TUT1Q9H6E5 874 aaKnown RBP16.65■□□□□ 0.26
SGCE-205ENST00000437425 RRN3P2A6NIE6 340 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms