RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 AKAP5P24588 427 aa20.23■□□□□ 0.83
HMGN1-207ENST00000436324 MLH1P40692 756 aa20.23■□□□□ 0.83
HMGN1-207ENST00000436324 NAMPTP43490 491 aa20.23■□□□□ 0.83
HMGN1-207ENST00000436324 PPP2R5AQ15172 486 aa20.23■□□□□ 0.83
HMGN1-207ENST00000436324 SLC27A1Q6PCB7 646 aa20.23■□□□□ 0.83
HMGN1-207ENST00000436324 BRAPQ7Z569 592 aa20.23■□□□□ 0.83
HMGN1-207ENST00000436324 BCL7CQ8WUZ0 217 aaPredicted RBP20.23■□□□□ 0.83
HMGN1-207ENST00000436324 KIFAP3Q92845 792 aa20.23■□□□□ 0.83
HMGN1-207ENST00000436324 IGSF21Q96ID5 467 aa20.23■□□□□ 0.83
HMGN1-207ENST00000436324 RUSC1Q9BVN2 902 aa20.23■□□□□ 0.83
HMGN1-207ENST00000436324 FZD8Q9H461 694 aa20.23■□□□□ 0.83
HMGN1-207ENST00000436324 NGRNQ9NPE2 291 aaKnown RBP20.23■□□□□ 0.83
HMGN1-207ENST00000436324 UBN1Q9NPG3 1134 aa20.23■□□□□ 0.83
HMGN1-207ENST00000436324 KANSL3Q9P2N6 904 aa20.23■□□□□ 0.83
HMGN1-207ENST00000436324 PARP2Q9UGN5 583 aa20.23■□□□□ 0.83
HMGN1-207ENST00000436324 CD207Q9UJ71 328 aa20.23■□□□□ 0.83
HMGN1-207ENST00000436324 BARX2Q9UMQ3 279 aaPredicted RBP20.23■□□□□ 0.83
HMGN1-207ENST00000436324 TTC28Q96AY4 2481 aa20.22■□□□□ 0.83
HMGN1-207ENST00000436324 A0A1B0GUA9 196 aa20.22■□□□□ 0.83
HMGN1-207ENST00000436324 GLP2RO95838 553 aa20.22■□□□□ 0.83
HMGN1-207ENST00000436324 PDCP20941 246 aa20.22■□□□□ 0.83
HMGN1-207ENST00000436324 PRPF4BQ13523 1007 aaKnown RBP20.22■□□□□ 0.83
HMGN1-207ENST00000436324 MAPK6Q16659 721 aa20.22■□□□□ 0.83
HMGN1-207ENST00000436324 DUSP6Q16828 381 aa20.22■□□□□ 0.83
HMGN1-207ENST00000436324 ARL6IP4Q66PJ3 421 aaKnown RBP20.22■□□□□ 0.83
HMGN1-207ENST00000436324 LLGL2Q6P1M3 1020 aa20.22■□□□□ 0.83
HMGN1-207ENST00000436324 HACE1Q8IYU2 909 aa20.22■□□□□ 0.83
HMGN1-207ENST00000436324 VPS52Q8N1B4 723 aa20.22■□□□□ 0.83
HMGN1-207ENST00000436324 CDK5RAP3Q96JB5 506 aa20.22■□□□□ 0.83
HMGN1-207ENST00000436324 ZFP42Q96MM3 310 aa20.22■□□□□ 0.83
HMGN1-207ENST00000436324 PNMA5Q96PV4 448 aa20.22■□□□□ 0.83
HMGN1-207ENST00000436324 MIOSQ9NXC5 875 aa20.22■□□□□ 0.83
HMGN1-207ENST00000436324 KLK14Q9P0G3 267 aa20.22■□□□□ 0.83
HMGN1-207ENST00000436324 CLEC1BQ9P126 229 aa20.22■□□□□ 0.83
HMGN1-207ENST00000436324 ARL5CA6NH57 179 aa20.21■□□□□ 0.83
HMGN1-207ENST00000436324 CCDC169A6NNP5 214 aa20.21■□□□□ 0.83
HMGN1-207ENST00000436324 K7ELQ4 463 aaPredicted RBP20.21■□□□□ 0.83
HMGN1-207ENST00000436324 HIP1RO75146 1068 aa20.21■□□□□ 0.83
HMGN1-207ENST00000436324 CXCL14O95715 111 aa20.21■□□□□ 0.83
HMGN1-207ENST00000436324 EDN1P05305 212 aa20.21■□□□□ 0.83
HMGN1-207ENST00000436324 SCNN1GP51170 649 aa20.21■□□□□ 0.83
HMGN1-207ENST00000436324 RAD51AP2Q09MP3 1159 aa20.21■□□□□ 0.83
HMGN1-207ENST00000436324 SMC1AQ14683 1233 aaKnown RBP20.21■□□□□ 0.83
HMGN1-207ENST00000436324 SF3A1Q15459 793 aaKnown RBP20.21■□□□□ 0.83
HMGN1-207ENST00000436324 FAM187BQ17R55 369 aa20.21■□□□□ 0.83
HMGN1-207ENST00000436324 RINT1Q6NUQ1 792 aa20.21■□□□□ 0.83
HMGN1-207ENST00000436324 CABP7Q86V35 215 aa20.21■□□□□ 0.83
HMGN1-207ENST00000436324 FAM178BQ8IXR5 827 aa20.21■□□□□ 0.83
HMGN1-207ENST00000436324 VN1R2Q8NFZ6 395 aa20.21■□□□□ 0.83
HMGN1-207ENST00000436324 AUTS2Q8WXX7 1259 aa20.21■□□□□ 0.83
HMGN1-207ENST00000436324 PRIMPOLQ96LW4 560 aa20.21■□□□□ 0.83
HMGN1-207ENST00000436324 CCDC113Q9H0I3 377 aa20.21■□□□□ 0.83
HMGN1-207ENST00000436324 CD320Q9NPF0 282 aa20.21■□□□□ 0.83
HMGN1-207ENST00000436324 FAM50BQ9Y247 325 aa20.21■□□□□ 0.83
HMGN1-207ENST00000436324 FAN1Q9Y2M0 1017 aa20.21■□□□□ 0.83
HMGN1-207ENST00000436324 N4BP3O15049 544 aa20.2■□□□□ 0.82
HMGN1-207ENST00000436324 MBTPS2O43462 519 aa20.2■□□□□ 0.82
HMGN1-207ENST00000436324 ALDH2P05091 517 aa20.2■□□□□ 0.82
HMGN1-207ENST00000436324 SYT1P21579 422 aa20.2■□□□□ 0.82
HMGN1-207ENST00000436324 SSTR3P32745 418 aaPredicted RBP20.2■□□□□ 0.82
HMGN1-207ENST00000436324 PEX3P56589 373 aa20.2■□□□□ 0.82
HMGN1-207ENST00000436324 C1orf186Q6ZWK4 172 aa20.2■□□□□ 0.82
HMGN1-207ENST00000436324 MSLNLQ96KJ4 702 aa20.2■□□□□ 0.82
HMGN1-207ENST00000436324 CDCA3Q99618 268 aaPredicted RBP20.2■□□□□ 0.82
HMGN1-207ENST00000436324 PDZD7Q9H5P4 517 aa20.2■□□□□ 0.82
HMGN1-207ENST00000436324 GIT1Q9Y2X7 761 aa20.2■□□□□ 0.82
HMGN1-207ENST00000436324 PRG3Q9Y2Y8 225 aaPredicted RBP20.2■□□□□ 0.82
HMGN1-207ENST00000436324 C2orf71A6NGG8 1288 aa20.19■□□□□ 0.82
HMGN1-207ENST00000436324 SFI1A8K8P3 1242 aa20.19■□□□□ 0.82
HMGN1-207ENST00000436324 ACKR2O00590 384 aa20.19■□□□□ 0.82
HMGN1-207ENST00000436324 NRP1O14786 923 aa20.19■□□□□ 0.82
HMGN1-207ENST00000436324 OR1G1P47890 313 aa20.19■□□□□ 0.82
HMGN1-207ENST00000436324 NPTX2P47972 431 aa20.19■□□□□ 0.82
HMGN1-207ENST00000436324 GRIN1Q05586 938 aa20.19■□□□□ 0.82
HMGN1-207ENST00000436324 SMAD4Q13485 552 aaKnown RBP20.19■□□□□ 0.82
HMGN1-207ENST00000436324 BMS1Q14692 1282 aaKnown RBP20.19■□□□□ 0.82
HMGN1-207ENST00000436324 HYIQ5T013 277 aa20.19■□□□□ 0.82
HMGN1-207ENST00000436324 EEF1DP3Q658K8 133 aa20.19■□□□□ 0.82
HMGN1-207ENST00000436324 FAM173BQ6P4H8 233 aa20.19■□□□□ 0.82
HMGN1-207ENST00000436324 DDX53Q86TM3 631 aaKnown RBP20.19■□□□□ 0.82
HMGN1-207ENST00000436324 DAW1Q8N136 415 aa20.19■□□□□ 0.82
HMGN1-207ENST00000436324 MRPL43Q8N983 215 aaKnown RBP20.19■□□□□ 0.82
HMGN1-207ENST00000436324 TMEM175Q9BSA9 504 aa20.19■□□□□ 0.82
HMGN1-207ENST00000436324 NT5C3AQ9H0P0 336 aa20.19■□□□□ 0.82
HMGN1-207ENST00000436324 ZBP1Q9H171 429 aa20.19■□□□□ 0.82
HMGN1-207ENST00000436324 CLIC4Q9Y696 253 aa20.19■□□□□ 0.82
HMGN1-207ENST00000436324 VCANP13611 3396 aa20.18■□□□□ 0.82
HMGN1-207ENST00000436324 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.18■□□□□ 0.82
HMGN1-207ENST00000436324 CARNS1A5YM72 827 aa20.18■□□□□ 0.82
HMGN1-207ENST00000436324 K7ERI5 159 aa20.18■□□□□ 0.82
HMGN1-207ENST00000436324 BMP15O95972 392 aa20.18■□□□□ 0.82
HMGN1-207ENST00000436324 PLA2G4BP0C869 781 aa20.18■□□□□ 0.82
HMGN1-207ENST00000436324 UBA7P41226 1012 aa20.18■□□□□ 0.82
HMGN1-207ENST00000436324 EFNA5P52803 228 aa20.18■□□□□ 0.82
HMGN1-207ENST00000436324 RESTQ13127 1097 aa20.18■□□□□ 0.82
HMGN1-207ENST00000436324 NT5DC1Q5TFE4 455 aa20.18■□□□□ 0.82
HMGN1-207ENST00000436324 COLGALT2Q8IYK4 626 aa20.18■□□□□ 0.82
HMGN1-207ENST00000436324 GJD3Q8N144 294 aa20.18■□□□□ 0.82
HMGN1-207ENST00000436324 TMEM87AQ8NBN3 555 aa20.18■□□□□ 0.82
HMGN1-207ENST00000436324 INTS4Q96HW7 963 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms