RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 PIGRP01833 764 aa15.81■□□□□ 0.12
CSTF3-202ENST00000431742 PROZP22891 400 aa15.81■□□□□ 0.12
CSTF3-202ENST00000431742 RAB27AP51159 221 aa15.81■□□□□ 0.12
CSTF3-202ENST00000431742 NCBP1Q09161 790 aaKnown RBP15.81■□□□□ 0.12
CSTF3-202ENST00000431742 ALCAMQ13740 583 aa15.81■□□□□ 0.12
CSTF3-202ENST00000431742 CHD9Q3L8U1 2897 aa15.81■□□□□ 0.12
CSTF3-202ENST00000431742 ZC2HC1CQ53FD0 456 aaPredicted RBP15.81■□□□□ 0.12
CSTF3-202ENST00000431742 FAM26FQ5R3K3 315 aa15.81■□□□□ 0.12
CSTF3-202ENST00000431742 EEF1DP3Q658K8 133 aa15.81■□□□□ 0.12
CSTF3-202ENST00000431742 SLC27A1Q6PCB7 646 aa15.81■□□□□ 0.12
CSTF3-202ENST00000431742 ZPBP2Q6X784 338 aa15.81■□□□□ 0.12
CSTF3-202ENST00000431742 EPM2AIP1Q7L775 607 aaPredicted RBP15.81■□□□□ 0.12
CSTF3-202ENST00000431742 TMCO2Q7Z6W1 182 aaPredicted RBP15.81■□□□□ 0.12
CSTF3-202ENST00000431742 ECHDC2Q86YB7 292 aa15.81■□□□□ 0.12
CSTF3-202ENST00000431742 NPAS4Q8IUM7 802 aa15.81■□□□□ 0.12
CSTF3-202ENST00000431742 MYOCDQ8IZQ8 938 aa15.81■□□□□ 0.12
CSTF3-202ENST00000431742 ACO2Q99798 780 aaKnown RBP15.81■□□□□ 0.12
CSTF3-202ENST00000431742 ELAC1Q9H777 363 aaKnown RBP15.81■□□□□ 0.12
CSTF3-202ENST00000431742 RC3H2Q9HBD1 1191 aaKnown RBP15.81■□□□□ 0.12
CSTF3-202ENST00000431742 PTPRHQ9HD43 1115 aa15.81■□□□□ 0.12
CSTF3-202ENST00000431742 FAM105AQ9NUU6 356 aa15.81■□□□□ 0.12
CSTF3-202ENST00000431742 TMEM161AQ9NX61 479 aa15.81■□□□□ 0.12
CSTF3-202ENST00000431742 TBC1D7Q9P0N9 293 aa15.81■□□□□ 0.12
CSTF3-202ENST00000431742 TNFSF13BQ9Y275 285 aa15.81■□□□□ 0.12
CSTF3-202ENST00000431742 GRXCR1A8MXD5 290 aa15.8■□□□□ 0.12
CSTF3-202ENST00000431742 GOLGA6L22H0YM25 854 aa15.8■□□□□ 0.12
CSTF3-202ENST00000431742 N4BP3O15049 544 aa15.8■□□□□ 0.12
CSTF3-202ENST00000431742 RPN1P04843 607 aaKnown RBP15.8■□□□□ 0.12
CSTF3-202ENST00000431742 ATXN8OSP0DMR3 200 aa15.8■□□□□ 0.12
CSTF3-202ENST00000431742 MYBP10242 640 aa15.8■□□□□ 0.12
CSTF3-202ENST00000431742 HTRA4P83105 476 aaPredicted RBP15.8■□□□□ 0.12
CSTF3-202ENST00000431742 STRN3Q13033 797 aa15.8■□□□□ 0.12
CSTF3-202ENST00000431742 PNOCQ13519 176 aa15.8■□□□□ 0.12
CSTF3-202ENST00000431742 KMT5BQ4FZB7 885 aa15.8■□□□□ 0.12
CSTF3-202ENST00000431742 ATF7IP2Q5U623 682 aa15.8■□□□□ 0.12
CSTF3-202ENST00000431742 MRPL10Q7Z7H8 261 aaKnown RBP15.8■□□□□ 0.12
CSTF3-202ENST00000431742 CDR2LQ86X02 465 aaPredicted RBP15.8■□□□□ 0.12
CSTF3-202ENST00000431742 GLIS3Q8NEA6 775 aa15.8■□□□□ 0.12
CSTF3-202ENST00000431742 SPATA20Q8TB22 786 aa15.8■□□□□ 0.12
CSTF3-202ENST00000431742 TARS2Q9BW92 718 aaKnown RBP15.8■□□□□ 0.12
CSTF3-202ENST00000431742 EIF2AQ9BY44 585 aaKnown RBP15.8■□□□□ 0.12
CSTF3-202ENST00000431742 ZMYM2Q9UBW7 1377 aa15.79■□□□□ 0.12
CSTF3-202ENST00000431742 UBE4BO95155 1302 aa15.79■□□□□ 0.12
CSTF3-202ENST00000431742 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.79■□□□□ 0.12
CSTF3-202ENST00000431742 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.79■□□□□ 0.12
CSTF3-202ENST00000431742 EIF3DO15371 548 aaKnown RBP eCLIP15.79■□□□□ 0.12
CSTF3-202ENST00000431742 RHOBTB3O94955 611 aa15.79■□□□□ 0.12
CSTF3-202ENST00000431742 GCNT3O95395 438 aa15.79■□□□□ 0.12
CSTF3-202ENST00000431742 EOMESO95936 686 aa15.79■□□□□ 0.12
CSTF3-202ENST00000431742 SKIP12755 728 aa15.79■□□□□ 0.12
CSTF3-202ENST00000431742 SMAD3P84022 425 aaKnown RBP15.79■□□□□ 0.12
CSTF3-202ENST00000431742 KCNB1Q14721 858 aa15.79■□□□□ 0.12
CSTF3-202ENST00000431742 L1TD1Q5T7N2 865 aaKnown RBP15.79■□□□□ 0.12
CSTF3-202ENST00000431742 SLC39A4Q6P5W5 647 aa15.79■□□□□ 0.12
CSTF3-202ENST00000431742 SMG8Q8ND04 991 aaKnown RBP15.79■□□□□ 0.12
CSTF3-202ENST00000431742 RNF19AQ9NV58 838 aa15.79■□□□□ 0.12
CSTF3-202ENST00000431742 EXOC1Q9NV70 894 aa15.79■□□□□ 0.12
CSTF3-202ENST00000431742 PCDHB2Q9Y5E7 798 aa15.79■□□□□ 0.12
CSTF3-202ENST00000431742 PCDHB13Q9Y5F0 798 aa15.79■□□□□ 0.12
CSTF3-202ENST00000431742 TOM1L1O75674 476 aa15.78■□□□□ 0.12
CSTF3-202ENST00000431742 DGKIO75912 1065 aa15.78■□□□□ 0.12
CSTF3-202ENST00000431742 STAG3L1P0CL83 205 aa15.78■□□□□ 0.12
CSTF3-202ENST00000431742 HOXD13P35453 343 aa15.78■□□□□ 0.12
CSTF3-202ENST00000431742 KCNA1Q09470 495 aa15.78■□□□□ 0.12
CSTF3-202ENST00000431742 PSMD2Q13200 908 aa15.78■□□□□ 0.12
CSTF3-202ENST00000431742 BMT2Q1RMZ1 405 aa15.78■□□□□ 0.12
CSTF3-202ENST00000431742 DCAF4L1Q3SXM0 396 aa15.78■□□□□ 0.12
CSTF3-202ENST00000431742 KIAA0895Q8NCT3 520 aa15.78■□□□□ 0.12
CSTF3-202ENST00000431742 SP7Q8TDD2 431 aaPredicted RBP15.78■□□□□ 0.12
CSTF3-202ENST00000431742 ZNF689Q96CS4 500 aaPredicted RBP15.78■□□□□ 0.12
CSTF3-202ENST00000431742 CDT1Q9H211 546 aa15.78■□□□□ 0.12
CSTF3-202ENST00000431742 NXF3Q9H4D5 531 aaKnown RBP15.78■□□□□ 0.12
CSTF3-202ENST00000431742 HOOK1Q9UJC3 728 aaKnown RBP15.78■□□□□ 0.12
CSTF3-202ENST00000431742 IPPQ9Y573 584 aa15.78■□□□□ 0.12
CSTF3-202ENST00000431742 PCDHA11Q9Y5I1 949 aa15.78■□□□□ 0.12
CSTF3-202ENST00000431742 COL4A4P53420 1690 aaPredicted RBP15.77■□□□□ 0.12
CSTF3-202ENST00000431742 MEIS3P2A8K0S8 358 aa15.77■□□□□ 0.12
CSTF3-202ENST00000431742 HNRNPDLO14979 420 aaKnown RBP15.77■□□□□ 0.12
CSTF3-202ENST00000431742 UPP2O95045 317 aa15.77■□□□□ 0.12
CSTF3-202ENST00000431742 NPTXRO95502 500 aa15.77■□□□□ 0.12
CSTF3-202ENST00000431742 RABGGTBP53611 331 aa15.77■□□□□ 0.12
CSTF3-202ENST00000431742 STK4Q13043 487 aa15.77■□□□□ 0.12
CSTF3-202ENST00000431742 ZNF568Q3ZCX4 644 aa15.77■□□□□ 0.12
CSTF3-202ENST00000431742 CLLU1OSQ5K130 101 aa15.77■□□□□ 0.12
CSTF3-202ENST00000431742 FAM117BQ6P1L5 589 aa15.77■□□□□ 0.12
CSTF3-202ENST00000431742 MPZL3Q6UWV2 235 aa15.77■□□□□ 0.12
CSTF3-202ENST00000431742 STXBP4Q6ZWJ1 553 aa15.77■□□□□ 0.12
CSTF3-202ENST00000431742 ZNF507Q8TCN5 953 aa15.77■□□□□ 0.12
CSTF3-202ENST00000431742 GPT2Q8TD30 523 aa15.77■□□□□ 0.12
CSTF3-202ENST00000431742 SCFD1Q8WVM8 642 aa15.77■□□□□ 0.12
CSTF3-202ENST00000431742 GSDMAQ96QA5 445 aa15.77■□□□□ 0.12
CSTF3-202ENST00000431742 ACCSQ96QU6 501 aa15.77■□□□□ 0.12
CSTF3-202ENST00000431742 RAD9AQ99638 391 aa15.77■□□□□ 0.12
CSTF3-202ENST00000431742 PBX4Q9BYU1 374 aa15.77■□□□□ 0.12
CSTF3-202ENST00000431742 HAPLN2Q9GZV7 340 aa15.77■□□□□ 0.12
CSTF3-202ENST00000431742 IKZF4Q9H2S9 585 aa15.77■□□□□ 0.12
CSTF3-202ENST00000431742 SLC39A2Q9NP94 309 aa15.77■□□□□ 0.12
CSTF3-202ENST00000431742 LRFN2Q9ULH4 789 aa15.77■□□□□ 0.12
CSTF3-202ENST00000431742 PCDHB7Q9Y5E2 793 aa15.77■□□□□ 0.12
CSTF3-202ENST00000431742 PCDHA5Q9Y5H7 936 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms