RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 NOCTQ9UK39 431 aaKnown RBP15.11■□□□□ 0.01
HOXC4-202ENST00000430889 MAFBQ9Y5Q3 323 aaPredicted RBP15.11■□□□□ 0.01
HOXC4-202ENST00000430889 ANKRD62A6NC57 917 aa15.1■□□□□ 0.01
HOXC4-202ENST00000430889 AGPSO00116 658 aa15.1■□□□□ 0.01
HOXC4-202ENST00000430889 GLI1P08151 1106 aa15.1■□□□□ 0.01
HOXC4-202ENST00000430889 CHRNB2P17787 502 aa15.1■□□□□ 0.01
HOXC4-202ENST00000430889 TNFAIP3P21580 790 aa15.1■□□□□ 0.01
HOXC4-202ENST00000430889 GTF2H1P32780 548 aa15.1■□□□□ 0.01
HOXC4-202ENST00000430889 MATR3P43243 847 aaKnown RBP eCLIP15.1■□□□□ 0.01
HOXC4-202ENST00000430889 CYP24A1Q07973 514 aa15.1■□□□□ 0.01
HOXC4-202ENST00000430889 GPS2Q13227 327 aa15.1■□□□□ 0.01
HOXC4-202ENST00000430889 BRDTQ58F21 947 aaPredicted RBP15.1■□□□□ 0.01
HOXC4-202ENST00000430889 XKR3Q5GH77 459 aa15.1■□□□□ 0.01
HOXC4-202ENST00000430889 MIS18BP1Q6P0N0 1132 aa15.1■□□□□ 0.01
HOXC4-202ENST00000430889 RIOX2Q8IUF8 465 aa15.1■□□□□ 0.01
HOXC4-202ENST00000430889 SYCE1Q8N0S2 351 aa15.1■□□□□ 0.01
HOXC4-202ENST00000430889 SLC35G2Q8TBE7 412 aa15.1■□□□□ 0.01
HOXC4-202ENST00000430889 HELQQ8TDG4 1101 aa15.1■□□□□ 0.01
HOXC4-202ENST00000430889 SAAL1Q96ER3 474 aa15.1■□□□□ 0.01
HOXC4-202ENST00000430889 CALR3Q96L12 384 aaKnown RBP15.1■□□□□ 0.01
HOXC4-202ENST00000430889 OSGEPQ9NPF4 335 aa15.1■□□□□ 0.01
HOXC4-202ENST00000430889 PSD3Q9NYI0 1048 aa15.1■□□□□ 0.01
HOXC4-202ENST00000430889 BTBD7Q9P203 1132 aa15.1■□□□□ 0.01
HOXC4-202ENST00000430889 TTC7AQ9ULT0 858 aaPredicted RBP15.1■□□□□ 0.01
HOXC4-202ENST00000430889 KCNK3O14649 394 aa15.09■□□□□ 0.01
HOXC4-202ENST00000430889 DDX3YO15523 660 aaKnown RBP15.09■□□□□ 0.01
HOXC4-202ENST00000430889 BUB1BO60566 1050 aaPredicted RBP15.09■□□□□ 0.01
HOXC4-202ENST00000430889 CLSTN1O94985 981 aa15.09■□□□□ 0.01
HOXC4-202ENST00000430889 ALDH5A1P51649 535 aaPredicted RBP15.09■□□□□ 0.01
HOXC4-202ENST00000430889 EPHB4P54760 987 aa15.09■□□□□ 0.01
HOXC4-202ENST00000430889 CLDN10P78369 228 aa15.09■□□□□ 0.01
HOXC4-202ENST00000430889 MRPS25P82663 173 aaKnown RBP15.09■□□□□ 0.01
HOXC4-202ENST00000430889 CNTN2Q02246 1040 aa15.09■□□□□ 0.01
HOXC4-202ENST00000430889 STXBP2Q15833 593 aa15.09■□□□□ 0.01
HOXC4-202ENST00000430889 KRT39Q6A163 491 aa15.09■□□□□ 0.01
HOXC4-202ENST00000430889 C15orf39Q6ZRI6 1047 aa15.09■□□□□ 0.01
HOXC4-202ENST00000430889 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.09■□□□□ 0.01
HOXC4-202ENST00000430889 TRMT1LQ7Z2T5 733 aaKnown RBP15.09■□□□□ 0.01
HOXC4-202ENST00000430889 EPS8L1Q8TE68 723 aa15.09■□□□□ 0.01
HOXC4-202ENST00000430889 TAF4BQ92750 862 aa15.09■□□□□ 0.01
HOXC4-202ENST00000430889 POLR3FQ9H1D9 316 aaPredicted RBP15.09■□□□□ 0.01
HOXC4-202ENST00000430889 ACBD3Q9H3P7 528 aa15.09■□□□□ 0.01
HOXC4-202ENST00000430889 DHX33Q9H6R0 707 aaKnown RBP15.09■□□□□ 0.01
HOXC4-202ENST00000430889 SEPT9Q9UHD8 586 aaPredicted RBP15.09■□□□□ 0.01
HOXC4-202ENST00000430889 STYXL1Q9Y6J8 313 aa15.09■□□□□ 0.01
HOXC4-202ENST00000430889 PIGRP01833 764 aa15.09■□□□□ 0.01
HOXC4-202ENST00000430889 DNA2P51530 1060 aa15.09■□□□□ 0.01
HOXC4-202ENST00000430889 MAP2K1Q02750 393 aaPredicted RBP15.09■□□□□ 0.01
HOXC4-202ENST00000430889 NNTQ13423 1086 aa15.09■□□□□ 0.01
HOXC4-202ENST00000430889 EMBQ6PCB8 327 aa15.09■□□□□ 0.01
HOXC4-202ENST00000430889 PEX26Q7Z412 305 aa15.09■□□□□ 0.01
HOXC4-202ENST00000430889 CNKSR2Q8WXI2 1034 aa15.09■□□□□ 0.01
HOXC4-202ENST00000430889 EXOC4Q96A65 974 aa15.09■□□□□ 0.01
HOXC4-202ENST00000430889 PCDHB18PQ96TA0 734 aa15.09■□□□□ 0.01
HOXC4-202ENST00000430889 NIFKQ9BYG3 293 aaKnown RBP15.09■□□□□ 0.01
HOXC4-202ENST00000430889 ZMYND15Q9H091 742 aa15.09■□□□□ 0.01
HOXC4-202ENST00000430889 THAP2Q9H0W7 228 aa15.09■□□□□ 0.01
HOXC4-202ENST00000430889 COG5Q9UP83 839 aa15.09■□□□□ 0.01
HOXC4-202ENST00000430889 H0YCG3 227 aa15.08■□□□□ 0
HOXC4-202ENST00000430889 IRF6O14896 467 aa15.08■□□□□ 0
HOXC4-202ENST00000430889 MTA2O94776 668 aa15.08■□□□□ 0
HOXC4-202ENST00000430889 ABCD1P33897 745 aa15.08■□□□□ 0
HOXC4-202ENST00000430889 TNNT3P45378 269 aaPredicted RBP15.08■□□□□ 0
HOXC4-202ENST00000430889 EMC2Q15006 297 aa15.08■□□□□ 0
HOXC4-202ENST00000430889 DLK2Q6UY11 383 aa15.08■□□□□ 0
HOXC4-202ENST00000430889 NOP9Q86U38 636 aaKnown RBP15.08■□□□□ 0
HOXC4-202ENST00000430889 GPD1LQ8N335 351 aa15.08■□□□□ 0
HOXC4-202ENST00000430889 CTNNBL1Q8WYA6 563 aaPredicted RBP15.08■□□□□ 0
HOXC4-202ENST00000430889 PCYT2Q99447 389 aa15.08■□□□□ 0
HOXC4-202ENST00000430889 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.08■□□□□ 0
HOXC4-202ENST00000430889 TOPORSQ9NS56 1045 aaPredicted RBP15.08■□□□□ 0
HOXC4-202ENST00000430889 FBXO40Q9UH90 709 aa15.08■□□□□ 0
HOXC4-202ENST00000430889 ADAM21Q9UKJ8 722 aa15.08■□□□□ 0
HOXC4-202ENST00000430889 FAN1Q9Y2M0 1017 aa15.08■□□□□ 0
HOXC4-202ENST00000430889 A0A0G2JLL6 359 aaPredicted RBP15.07■□□□□ 0
HOXC4-202ENST00000430889 SOWAHBA6NEL2 793 aa15.07■□□□□ 0
HOXC4-202ENST00000430889 PGRMC1O00264 195 aaKnown RBP15.07■□□□□ 0
HOXC4-202ENST00000430889 RAD51CO43502 376 aa15.07■□□□□ 0
HOXC4-202ENST00000430889 PEX10O60683 326 aa15.07■□□□□ 0
HOXC4-202ENST00000430889 CNMDO75829 334 aa15.07■□□□□ 0
HOXC4-202ENST00000430889 HEXIM1O94992 359 aaKnown RBP15.07■□□□□ 0
HOXC4-202ENST00000430889 SGPL1O95470 568 aa15.07■□□□□ 0
HOXC4-202ENST00000430889 OATP04181 439 aa15.07■□□□□ 0
HOXC4-202ENST00000430889 GZMAP12544 262 aa15.07■□□□□ 0
HOXC4-202ENST00000430889 SCP2P22307 547 aa15.07■□□□□ 0
HOXC4-202ENST00000430889 ARL2P36404 184 aa15.07■□□□□ 0
HOXC4-202ENST00000430889 PRPF4BQ13523 1007 aaKnown RBP15.07■□□□□ 0
HOXC4-202ENST00000430889 TARBP2Q15633 366 aaKnown RBP15.07■□□□□ 0
HOXC4-202ENST00000430889 DCAF12L1Q5VU92 463 aa15.07■□□□□ 0
HOXC4-202ENST00000430889 CYFIP1Q7L576 1253 aa15.07■□□□□ 0
HOXC4-202ENST00000430889 PRRT2Q7Z6L0 340 aaPredicted RBP15.07■□□□□ 0
HOXC4-202ENST00000430889 DAAM2Q86T65 1068 aa15.07■□□□□ 0
HOXC4-202ENST00000430889 RPUSD2Q8IZ73 545 aaKnown RBP15.07■□□□□ 0
HOXC4-202ENST00000430889 EIF1ADQ8N9N8 165 aaKnown RBP15.07■□□□□ 0
HOXC4-202ENST00000430889 TAS1R2Q8TE23 839 aa15.07■□□□□ 0
HOXC4-202ENST00000430889 KRT12Q99456 494 aa15.07■□□□□ 0
HOXC4-202ENST00000430889 POP1Q99575 1024 aaKnown RBP15.07■□□□□ 0
HOXC4-202ENST00000430889 HINFPQ9BQA5 517 aa15.07■□□□□ 0
HOXC4-202ENST00000430889 PORCNQ9H237 461 aa15.07■□□□□ 0
HOXC4-202ENST00000430889 AMFRQ9UKV5 643 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms