RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 RBM19Q9Y4C8 960 aaKnown RBP10.83□□□□□ -0.68
HDAC6-207ENST00000430858 HES2Q9Y543 173 aa10.83□□□□□ -0.68
HDAC6-207ENST00000430858 MORC2Q9Y6X9 1032 aaPredicted RBP10.83□□□□□ -0.68
HDAC6-207ENST00000430858 UNC80Q8N2C7 3258 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 ZMYM2Q9UBW7 1377 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 FSD2A1L4K1 749 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 CCDC169A6NNP5 214 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 K7ERI5 159 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 NPTXRO95502 500 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 GALTP07902 379 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 LIG1P18858 919 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 MARCKSP29966 332 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-207ENST00000430858 MLH1P40692 756 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 NPTX2P47972 431 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 KCNQ1P51787 676 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 ERVFC1P60507 584 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 MAPK7Q13164 816 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 BMS1Q14692 1282 aaKnown RBP10.82□□□□□ -0.68
HDAC6-207ENST00000430858 TMEM132AQ24JP5 1023 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 CTC1Q2NKJ3 1217 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 PUS10Q3MIT2 529 aaKnown RBP10.82□□□□□ -0.68
HDAC6-207ENST00000430858 EP400NLQ6ZTU2 488 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 CDR2LQ86X02 465 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-207ENST00000430858 RASSF8Q8NHQ8 419 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 FAM193BQ96PV7 902 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-207ENST00000430858 CDCA3Q99618 268 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-207ENST00000430858 TCF25Q9BQ70 676 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 TMEM175Q9BSA9 504 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 NTPCRQ9BSD7 190 aaKnown RBP10.82□□□□□ -0.68
HDAC6-207ENST00000430858 GBP3Q9H0R5 595 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 RNF39Q9H2S5 420 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 NXF3Q9H4D5 531 aaKnown RBP10.82□□□□□ -0.68
HDAC6-207ENST00000430858 PDZD7Q9H5P4 517 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 TMEM134Q9H6X4 195 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 NGRNQ9NPE2 291 aaKnown RBP10.82□□□□□ -0.68
HDAC6-207ENST00000430858 KMT5AQ9NQR1 393 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 CLDND1Q9NY35 253 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 ARHGAP28Q9P2N2 729 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 STK39Q9UEW8 545 aa10.82□□□□□ -0.68
HDAC6-207ENST00000430858 SRPRBQ9Y5M8 271 aaKnown RBP10.82□□□□□ -0.68
HDAC6-207ENST00000430858 ARL5CA6NH57 179 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 TTLL13PA6NNM8 815 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 NT5C1B-RDH14C9J2C7 533 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 DDHD2O94830 711 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 POMCP01189 267 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 ALDH2P05091 517 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 PLS3P13797 630 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 PLCG1P19174 1290 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 SLC11A1P49279 550 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 AFF1P51825 1210 aaKnown RBP10.81□□□□□ -0.68
HDAC6-207ENST00000430858 SMTNP53814 917 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 CEBPZQ03701 1054 aaKnown RBP10.81□□□□□ -0.68
HDAC6-207ENST00000430858 ADAM15Q13444 863 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 SLC39A14Q15043 492 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 KARSQ15046 597 aaKnown RBP10.81□□□□□ -0.68
HDAC6-207ENST00000430858 TMC7Q7Z402 723 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 APBB1IPQ7Z5R6 666 aaPredicted RBP10.81□□□□□ -0.68
HDAC6-207ENST00000430858 ADGRD2Q7Z7M1 963 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 ZNF280BQ86YH2 543 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 EFHBQ8N7U6 833 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 ADAMTS19Q8TE59 1207 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 SPIRE2Q8WWL2 714 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 IGSF21Q96ID5 467 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 USP28Q96RU2 1077 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 GAD1Q99259 594 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 APOL6Q9BWW8 343 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 IGFLR1Q9H665 355 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 TLE6Q9H808 572 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 ENTPD7Q9NQZ7 604 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 LARSQ9P2J5 1176 aaKnown RBP10.81□□□□□ -0.68
HDAC6-207ENST00000430858 DNAJB4Q9UDY4 337 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 CCDC39Q9UFE4 941 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 PARP2Q9UGN5 583 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 FBXO2Q9UK22 296 aaPredicted RBP10.81□□□□□ -0.68
HDAC6-207ENST00000430858 ODF2LQ9ULJ1 636 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 KIAA1671Q9BY89 1806 aa10.81□□□□□ -0.68
HDAC6-207ENST00000430858 SFI1A8K8P3 1242 aa10.8□□□□□ -0.68
HDAC6-207ENST00000430858 H3BQ06 376 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-207ENST00000430858 NR1I2O75469 434 aa10.8□□□□□ -0.68
HDAC6-207ENST00000430858 AKAP5P24588 427 aa10.8□□□□□ -0.68
HDAC6-207ENST00000430858 GTF2F1P35269 517 aaKnown RBP eCLIP10.8□□□□□ -0.68
HDAC6-207ENST00000430858 LTBRP36941 435 aa10.8□□□□□ -0.68
HDAC6-207ENST00000430858 TXLNAP40222 546 aa10.8□□□□□ -0.68
HDAC6-207ENST00000430858 NRIP1P48552 1158 aa10.8□□□□□ -0.68
HDAC6-207ENST00000430858 NASPP49321 788 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-207ENST00000430858 SCNN1GP51170 649 aa10.8□□□□□ -0.68
HDAC6-207ENST00000430858 DSC1Q08554 894 aa10.8□□□□□ -0.68
HDAC6-207ENST00000430858 RAD51AP2Q09MP3 1159 aa10.8□□□□□ -0.68
HDAC6-207ENST00000430858 GIT2Q14161 759 aa10.8□□□□□ -0.68
HDAC6-207ENST00000430858 SMC1AQ14683 1233 aaKnown RBP10.8□□□□□ -0.68
HDAC6-207ENST00000430858 DUSP6Q16828 381 aa10.8□□□□□ -0.68
HDAC6-207ENST00000430858 DCAF4L1Q3SXM0 396 aa10.8□□□□□ -0.68
HDAC6-207ENST00000430858 ATF7IP2Q5U623 682 aa10.8□□□□□ -0.68
HDAC6-207ENST00000430858 PLPP4Q5VZY2 271 aa10.8□□□□□ -0.68
HDAC6-207ENST00000430858 DDX53Q86TM3 631 aaKnown RBP10.8□□□□□ -0.68
HDAC6-207ENST00000430858 RBM23Q86U06 439 aaKnown RBP10.8□□□□□ -0.68
HDAC6-207ENST00000430858 TMEM173Q86WV6 379 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-207ENST00000430858 COLGALT2Q8IYK4 626 aa10.8□□□□□ -0.68
HDAC6-207ENST00000430858 KRI1Q8N9T8 703 aaKnown RBP10.8□□□□□ -0.68
HDAC6-207ENST00000430858 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms