RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 RIPOR3Q96MK2 946 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 KIF2CQ99661 725 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 COLEC11Q9BWP8 271 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 PHF7Q9BWX1 381 aaPredicted RBP10.1□□□□□ -0.79
HDAC9-211ENST00000430454 EPHX3Q9H6B9 360 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 MINDY3Q9H8M7 445 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 XPNPEP1Q9NQW7 623 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 MRPL17Q9NRX2 175 aaKnown RBP10.1□□□□□ -0.79
HDAC9-211ENST00000430454 CLEC1BQ9P126 229 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 BARX2Q9UMQ3 279 aaPredicted RBP10.1□□□□□ -0.79
HDAC9-211ENST00000430454 SMC3Q9UQE7 1217 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 NR2E1Q9Y466 385 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 USP15Q9Y4E8 981 aaPredicted RBP10.1□□□□□ -0.79
HDAC9-211ENST00000430454 ARIH1Q9Y4X5 557 aaPredicted RBP10.1□□□□□ -0.79
HDAC9-211ENST00000430454 IPPQ9Y573 584 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 IRAK3Q9Y616 596 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 BRWD1Q9NSI6 2320 aa10.1□□□□□ -0.79
HDAC9-211ENST00000430454 A0A1B0GUA9 196 aa10.09□□□□□ -0.79
HDAC9-211ENST00000430454 ARL5CA6NH57 179 aa10.09□□□□□ -0.79
HDAC9-211ENST00000430454 PRR33A8MZF0 331 aa10.09□□□□□ -0.79
HDAC9-211ENST00000430454 RBAK-RBAKDNI3L0D1 243 aa10.09□□□□□ -0.79
HDAC9-211ENST00000430454 MED24O75448 989 aa10.09□□□□□ -0.79
HDAC9-211ENST00000430454 URODP06132 367 aa10.09□□□□□ -0.79
HDAC9-211ENST00000430454 CTSAP10619 480 aa10.09□□□□□ -0.79
HDAC9-211ENST00000430454 PBX3P40426 434 aa10.09□□□□□ -0.79
HDAC9-211ENST00000430454 MTHFRP42898 656 aa10.09□□□□□ -0.79
HDAC9-211ENST00000430454 NAMPTP43490 491 aa10.09□□□□□ -0.79
HDAC9-211ENST00000430454 CREMQ03060 361 aa10.09□□□□□ -0.79
HDAC9-211ENST00000430454 PTGDRQ13258 359 aa10.09□□□□□ -0.79
HDAC9-211ENST00000430454 PRPF4BQ13523 1007 aaKnown RBP10.09□□□□□ -0.79
HDAC9-211ENST00000430454 CBX2Q14781 532 aaPredicted RBP10.09□□□□□ -0.79
HDAC9-211ENST00000430454 FAM187BQ17R55 369 aa10.09□□□□□ -0.79
HDAC9-211ENST00000430454 KIAA1841Q6NSI8 718 aa10.09□□□□□ -0.79
HDAC9-211ENST00000430454 LLGL2Q6P1M3 1020 aa10.09□□□□□ -0.79
HDAC9-211ENST00000430454 POTEGQ6S5H5 508 aa10.09□□□□□ -0.79
HDAC9-211ENST00000430454 AGMOQ6ZNB7 445 aa10.09□□□□□ -0.79
HDAC9-211ENST00000430454 MAEAQ7L5Y9 396 aa10.09□□□□□ -0.79
HDAC9-211ENST00000430454 ASAP3Q8TDY4 903 aa10.09□□□□□ -0.79
HDAC9-211ENST00000430454 SNX29Q8TEQ0 813 aa10.09□□□□□ -0.79
HDAC9-211ENST00000430454 CDK5RAP3Q96JB5 506 aa10.09□□□□□ -0.79
HDAC9-211ENST00000430454 RPS6KC1Q96S38 1066 aa10.09□□□□□ -0.79
HDAC9-211ENST00000430454 TIPINQ9BVW5 301 aa10.09□□□□□ -0.79
HDAC9-211ENST00000430454 NRDE2Q9H7Z3 1164 aa10.09□□□□□ -0.79
HDAC9-211ENST00000430454 HCSTQ9UBK5 93 aa10.09□□□□□ -0.79
HDAC9-211ENST00000430454 KIAA1671Q9BY89 1806 aa10.09□□□□□ -0.79
HDAC9-211ENST00000430454 HIDE1A8MVS5 230 aa10.08□□□□□ -0.8
HDAC9-211ENST00000430454 NT5C1B-RDH14C9J2C7 533 aa10.08□□□□□ -0.8
HDAC9-211ENST00000430454 INPPL1O15357 1258 aa10.08□□□□□ -0.8
HDAC9-211ENST00000430454 SLC26A4O43511 780 aa10.08□□□□□ -0.8
HDAC9-211ENST00000430454 CLASP2O75122 1294 aaKnown RBP10.08□□□□□ -0.8
HDAC9-211ENST00000430454 BMP15O95972 392 aa10.08□□□□□ -0.8
HDAC9-211ENST00000430454 POMCP01189 267 aa10.08□□□□□ -0.8
HDAC9-211ENST00000430454 ARF4P18085 180 aaPredicted RBP10.08□□□□□ -0.8
HDAC9-211ENST00000430454 PDCP20941 246 aa10.08□□□□□ -0.8
HDAC9-211ENST00000430454 OR1G1P47890 313 aa10.08□□□□□ -0.8
HDAC9-211ENST00000430454 SLC11A1P49279 550 aa10.08□□□□□ -0.8
HDAC9-211ENST00000430454 DCAF4L1Q3SXM0 396 aa10.08□□□□□ -0.8
HDAC9-211ENST00000430454 ATAT1Q5SQI0 421 aa10.08□□□□□ -0.8
HDAC9-211ENST00000430454 UBXN11Q5T124 520 aa10.08□□□□□ -0.8
HDAC9-211ENST00000430454 CDCA2Q69YH5 1023 aaPredicted RBP10.08□□□□□ -0.8
HDAC9-211ENST00000430454 CABP7Q86V35 215 aa10.08□□□□□ -0.8
HDAC9-211ENST00000430454 CPB2Q96IY4 423 aa10.08□□□□□ -0.8
HDAC9-211ENST00000430454 TMX3Q96JJ7 454 aa10.08□□□□□ -0.8
HDAC9-211ENST00000430454 DRC1Q96MC2 740 aa10.08□□□□□ -0.8
HDAC9-211ENST00000430454 LRFN3Q9BTN0 628 aa10.08□□□□□ -0.8
HDAC9-211ENST00000430454 APOL6Q9BWW8 343 aa10.08□□□□□ -0.8
HDAC9-211ENST00000430454 NT5C3AQ9H0P0 336 aa10.08□□□□□ -0.8
HDAC9-211ENST00000430454 ZBP1Q9H171 429 aa10.08□□□□□ -0.8
HDAC9-211ENST00000430454 BHMT2Q9H2M3 363 aa10.08□□□□□ -0.8
HDAC9-211ENST00000430454 ADAM7Q9H2U9 754 aa10.08□□□□□ -0.8
HDAC9-211ENST00000430454 C17orf75Q9HAS0 396 aa10.08□□□□□ -0.8
HDAC9-211ENST00000430454 DDX19AQ9NUU7 478 aaKnown RBP10.08□□□□□ -0.8
HDAC9-211ENST00000430454 PARP2Q9UGN5 583 aa10.08□□□□□ -0.8
HDAC9-211ENST00000430454 KIAA1024Q9UPX6 916 aa10.08□□□□□ -0.8
HDAC9-211ENST00000430454 PCDHGC5Q9Y5F6 944 aa10.08□□□□□ -0.8
HDAC9-211ENST00000430454 LOC730098B7Z3J9 87 aa10.07□□□□□ -0.8
HDAC9-211ENST00000430454 ACKR2O00590 384 aa10.07□□□□□ -0.8
HDAC9-211ENST00000430454 WNT7AO00755 349 aa10.07□□□□□ -0.8
HDAC9-211ENST00000430454 NRP1O14786 923 aa10.07□□□□□ -0.8
HDAC9-211ENST00000430454 NPTXRO95502 500 aa10.07□□□□□ -0.8
HDAC9-211ENST00000430454 GLP2RO95838 553 aa10.07□□□□□ -0.8
HDAC9-211ENST00000430454 C1RP00736 705 aa10.07□□□□□ -0.8
HDAC9-211ENST00000430454 PRKCBP05771 671 aa10.07□□□□□ -0.8
HDAC9-211ENST00000430454 ADH1AP07327 375 aa10.07□□□□□ -0.8
HDAC9-211ENST00000430454 SCP2P22307 547 aa10.07□□□□□ -0.8
HDAC9-211ENST00000430454 KLRC2P26717 231 aa10.07□□□□□ -0.8
HDAC9-211ENST00000430454 GJB2P29033 226 aa10.07□□□□□ -0.8
HDAC9-211ENST00000430454 MLH1P40692 756 aa10.07□□□□□ -0.8
HDAC9-211ENST00000430454 GRIK3Q13003 919 aa10.07□□□□□ -0.8
HDAC9-211ENST00000430454 DMP1Q13316 513 aaPredicted RBP10.07□□□□□ -0.8
HDAC9-211ENST00000430454 HERC4Q5GLZ8 1057 aaPredicted RBP10.07□□□□□ -0.8
HDAC9-211ENST00000430454 ARL6IP4Q66PJ3 421 aaKnown RBP10.07□□□□□ -0.8
HDAC9-211ENST00000430454 PDXDC1Q6P996 788 aa10.07□□□□□ -0.8
HDAC9-211ENST00000430454 ZBTB33Q86T24 672 aa10.07□□□□□ -0.8
HDAC9-211ENST00000430454 ZNF280BQ86YH2 543 aa10.07□□□□□ -0.8
HDAC9-211ENST00000430454 RNF135Q8IUD6 432 aa10.07□□□□□ -0.8
HDAC9-211ENST00000430454 GPR65Q8IYL9 337 aa10.07□□□□□ -0.8
HDAC9-211ENST00000430454 IGSF22Q8N9C0 903 aa10.07□□□□□ -0.8
HDAC9-211ENST00000430454 SMG8Q8ND04 991 aaKnown RBP10.07□□□□□ -0.8
HDAC9-211ENST00000430454 MFSD14AQ96MC6 490 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms