RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 ASAP3Q8TDY4 903 aa13.57□□□□□ -0.24
LDB3-205ENST00000429277 OSBPL9Q96SU4 736 aa13.57□□□□□ -0.24
LDB3-205ENST00000429277 TAF1DQ9H5J8 278 aaPredicted RBP13.57□□□□□ -0.24
LDB3-205ENST00000429277 EHD2Q9NZN4 543 aa13.57□□□□□ -0.24
LDB3-205ENST00000429277 MAP3K4Q9Y6R4 1608 aa13.57□□□□□ -0.24
LDB3-205ENST00000429277 RPSAP08865 295 aaKnown RBP13.57□□□□□ -0.24
LDB3-205ENST00000429277 HSD17B4P51659 736 aa13.57□□□□□ -0.24
LDB3-205ENST00000429277 PPP2R2AP63151 447 aa13.57□□□□□ -0.24
LDB3-205ENST00000429277 RHPN2Q8IUC4 686 aa13.57□□□□□ -0.24
LDB3-205ENST00000429277 STX18Q9P2W9 335 aaKnown RBP13.57□□□□□ -0.24
LDB3-205ENST00000429277 AGO2Q9UKV8 859 aaKnown RBP13.57□□□□□ -0.24
LDB3-205ENST00000429277 ABCA8O94911 1581 aa13.57□□□□□ -0.24
LDB3-205ENST00000429277 IQCA1LA6NCM1 817 aa13.57□□□□□ -0.24
LDB3-205ENST00000429277 CYP27B1O15528 508 aa13.57□□□□□ -0.24
LDB3-205ENST00000429277 CYP2D6P10635 497 aa13.57□□□□□ -0.24
LDB3-205ENST00000429277 CYB5R4Q7L1T6 521 aa13.57□□□□□ -0.24
LDB3-205ENST00000429277 OTUB1Q96FW1 271 aaPredicted RBP13.57□□□□□ -0.24
LDB3-205ENST00000429277 EPAS1Q99814 870 aa13.57□□□□□ -0.24
LDB3-205ENST00000429277 EML4Q9HC35 981 aaKnown RBP13.57□□□□□ -0.24
LDB3-205ENST00000429277 TBX3O15119 743 aa13.56□□□□□ -0.24
LDB3-205ENST00000429277 FTLP02792 175 aaPredicted RBP13.56□□□□□ -0.24
LDB3-205ENST00000429277 MXD4Q14582 209 aaPredicted RBP13.56□□□□□ -0.24
LDB3-205ENST00000429277 ING2Q9H160 280 aa13.56□□□□□ -0.24
LDB3-205ENST00000429277 KDM4CQ9H3R0 1056 aa13.56□□□□□ -0.24
LDB3-205ENST00000429277 PCDHB8Q9UN66 801 aa13.56□□□□□ -0.24
LDB3-205ENST00000429277 TARSL2A2RTX5 802 aaKnown RBP13.56□□□□□ -0.24
LDB3-205ENST00000429277 A8MXQ7 604 aa13.56□□□□□ -0.24
LDB3-205ENST00000429277 PIK3R2O00459 728 aa13.56□□□□□ -0.24
LDB3-205ENST00000429277 EFCAB14O75071 495 aa13.56□□□□□ -0.24
LDB3-205ENST00000429277 CDC27P30260 824 aa13.56□□□□□ -0.24
LDB3-205ENST00000429277 CYP2C19P33261 490 aa13.56□□□□□ -0.24
LDB3-205ENST00000429277 CAPRIN1Q14444 709 aaKnown RBP13.56□□□□□ -0.24
LDB3-205ENST00000429277 RBM46Q8TBY0 533 aaKnown RBP13.56□□□□□ -0.24
LDB3-205ENST00000429277 CHAMP1Q96JM3 812 aa13.56□□□□□ -0.24
LDB3-205ENST00000429277 SPATA33Q96N06 139 aa13.56□□□□□ -0.24
LDB3-205ENST00000429277 CAPN11Q9UMQ6 739 aa13.56□□□□□ -0.24
LDB3-205ENST00000429277 KRT14P02533 472 aa13.56□□□□□ -0.24
LDB3-205ENST00000429277 STAT4Q14765 748 aa13.56□□□□□ -0.24
LDB3-205ENST00000429277 BTBD8Q5XKL5 378 aa13.56□□□□□ -0.24
LDB3-205ENST00000429277 RPAINQ86UA6 219 aa13.56□□□□□ -0.24
LDB3-205ENST00000429277 ADGRF4Q8IZF3 695 aa13.56□□□□□ -0.24
LDB3-205ENST00000429277 TBC1D19Q8N5T2 526 aa13.56□□□□□ -0.24
LDB3-205ENST00000429277 LPAR1Q92633 364 aa13.56□□□□□ -0.24
LDB3-205ENST00000429277 HEMGNQ9BXL5 484 aa13.56□□□□□ -0.24
LDB3-205ENST00000429277 HACD3Q9P035 362 aa13.56□□□□□ -0.24
LDB3-205ENST00000429277 POLIQ9UNA4 740 aa13.56□□□□□ -0.24
LDB3-205ENST00000429277 SNAP25P60880 206 aa13.56□□□□□ -0.24
LDB3-205ENST00000429277 LCA5Q86VQ0 697 aa13.56□□□□□ -0.24
LDB3-205ENST00000429277 N4BP2L2Q92802 583 aaPredicted RBP13.56□□□□□ -0.24
LDB3-205ENST00000429277 EIF2AK1Q9BQI3 630 aaKnown RBP13.56□□□□□ -0.24
LDB3-205ENST00000429277 ABCF3Q9NUQ8 709 aa13.56□□□□□ -0.24
LDB3-205ENST00000429277 ATF5Q9Y2D1 282 aaPredicted RBP13.56□□□□□ -0.24
LDB3-205ENST00000429277 SYCE1LA8MT33 242 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 CREB3O43889 395 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 ARFIP2P53365 341 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 SYNE4Q8N205 404 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 PPM1NQ8N819 430 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 TSSK1BQ9BXA7 367 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 TRIM49BA6NDI0 452 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 CFAP73A6NFT4 308 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 SMAPO00193 183 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 SNRPFP62306 86 aaKnown RBP13.55□□□□□ -0.24
LDB3-205ENST00000429277 AP2B1P63010 937 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 MAP3K10Q02779 954 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 BRINP3Q76B58 766 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 AFG1LQ8WV93 481 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 CCSER1Q9C0I3 900 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 UVRAGQ9P2Y5 699 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 UBN2Q6ZU65 1347 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 GFPT1Q06210 699 aaPredicted RBP13.55□□□□□ -0.24
LDB3-205ENST00000429277 SPP2Q13103 211 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 FAM102AQ5T9C2 384 aaPredicted RBP13.55□□□□□ -0.24
LDB3-205ENST00000429277 FBXO38Q6PIJ6 1188 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 HAUS6Q7Z4H7 955 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 SLC26A7Q8TE54 656 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 GMNCA6NCL1 334 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 APOL1O14791 398 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 RTN2O75298 545 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 DGAT1O75907 488 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 ZNF235Q14590 738 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 ANO5Q75V66 913 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 PATL1Q86TB9 770 aaKnown RBP13.55□□□□□ -0.24
LDB3-205ENST00000429277 TBC1D1Q86TI0 1168 aaPredicted RBP13.55□□□□□ -0.24
LDB3-205ENST00000429277 RASSF3Q86WH2 238 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 PASD1Q8IV76 773 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 CATSPER1Q8NEC5 780 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 RNF25Q96BH1 459 aaPredicted RBP13.55□□□□□ -0.24
LDB3-205ENST00000429277 FOXP3Q9BZS1 431 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 ANLNQ9NQW6 1124 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 PCDHGB4Q9UN71 923 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 ARHGAP26Q9UNA1 814 aa13.55□□□□□ -0.24
LDB3-205ENST00000429277 CYP19A1P11511 503 aaPredicted RBP13.54□□□□□ -0.24
LDB3-205ENST00000429277 ABCE1P61221 599 aaKnown RBP13.54□□□□□ -0.24
LDB3-205ENST00000429277 GPS1Q13098 491 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 CEP55Q53EZ4 464 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 PDCD6IPQ8WUM4 868 aaKnown RBP13.54□□□□□ -0.24
LDB3-205ENST00000429277 SCFD1Q8WVM8 642 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 KRT35Q92764 455 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 PPP2R3CQ969Q6 453 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 EGFL8Q99944 293 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms