RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 HSPBP1Q9NZL4 362 aa10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 NOC2LQ9Y3T9 749 aaKnown RBP10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 CDY2AQ9Y6F7 541 aa10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 KBTBD13C9JR72 458 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 EPHB6O15197 1021 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 EXOC3O60645 756 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 SGPL1O95470 568 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 DLATP10515 647 aaKnown RBP10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 AKAP5P24588 427 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 LIG4P49917 911 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 DNM2P50570 870 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 GUCY2FP51841 1108 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 ARHGEF6Q15052 776 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 TRIM60Q495X7 471 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 MIIPQ5JXC2 388 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 MAP4K3Q8IVH8 894 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 CCDC113Q9H0I3 377 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 RNF39Q9H2S5 420 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 KLK14Q9P0G3 267 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 ATP11BQ9Y2G3 1177 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 PDE4DIPQ5VU43 2346 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 IKBKBO14920 756 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 PNMA6AP0CW24 399 aaPredicted RBP10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 ACTN1P12814 892 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 CD52P31358 61 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 MTIF2P46199 727 aaKnown RBP10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 UBASH3AP57075 661 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 PTENP60484 403 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 CCDC40Q4G0X9 1142 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 GJB7Q6PEY0 223 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 PCSK9Q8NBP7 692 aaKnown RBP10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 LPPQ93052 612 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 MAP7D2Q96T17 732 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 TUBGCP2Q9BSJ2 902 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 PDE11AQ9HCR9 933 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 SPTLC3Q9NUV7 552 aa10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 TYW1Q9NV66 732 aaKnown RBP10.41□□□□□ -0.74
HMGCLL1-206ENST00000428842 MYO7AQ13402 2215 aa10.4□□□□□ -0.74
HMGCLL1-206ENST00000428842 UQCRHLA0A096LP55 91 aa10.4□□□□□ -0.74
HMGCLL1-206ENST00000428842 MGEA5O60502 916 aa10.4□□□□□ -0.74
HMGCLL1-206ENST00000428842 TPM3P06753 285 aa10.4□□□□□ -0.74
HMGCLL1-206ENST00000428842 UQCRHP07919 91 aa10.4□□□□□ -0.74
HMGCLL1-206ENST00000428842 TMOD1P28289 359 aa10.4□□□□□ -0.74
HMGCLL1-206ENST00000428842 HOXA11P31270 313 aaPredicted RBP10.4□□□□□ -0.74
HMGCLL1-206ENST00000428842 HOXC8P31273 242 aa10.4□□□□□ -0.74
HMGCLL1-206ENST00000428842 PRPF4BQ13523 1007 aaKnown RBP10.4□□□□□ -0.74
HMGCLL1-206ENST00000428842 SNX17Q15036 470 aa10.4□□□□□ -0.74
HMGCLL1-206ENST00000428842 LRRC26Q2I0M4 334 aa10.4□□□□□ -0.74
HMGCLL1-206ENST00000428842 CBWD6Q4V339 395 aa10.4□□□□□ -0.74
HMGCLL1-206ENST00000428842 CBWD3Q5JTY5 395 aa10.4□□□□□ -0.74
HMGCLL1-206ENST00000428842 GLRA4Q5JXX5 417 aa10.4□□□□□ -0.74
HMGCLL1-206ENST00000428842 CBWD5Q5RIA9 395 aa10.4□□□□□ -0.74
HMGCLL1-206ENST00000428842 CRELD2Q6UXH1 353 aaPredicted RBP10.4□□□□□ -0.74
HMGCLL1-206ENST00000428842 SERINC5Q86VE9 423 aa10.4□□□□□ -0.74
HMGCLL1-206ENST00000428842 RNF169Q8NCN4 708 aa10.4□□□□□ -0.74
HMGCLL1-206ENST00000428842 ACCSQ96QU6 501 aa10.4□□□□□ -0.74
HMGCLL1-206ENST00000428842 BPIFA3Q9BQP9 254 aa10.4□□□□□ -0.74
HMGCLL1-206ENST00000428842 PDCL3Q9H2J4 239 aa10.4□□□□□ -0.74
HMGCLL1-206ENST00000428842 NXF3Q9H4D5 531 aaKnown RBP10.4□□□□□ -0.74
HMGCLL1-206ENST00000428842 OGDHLQ9ULD0 1010 aa10.4□□□□□ -0.74
HMGCLL1-206ENST00000428842 MYO9BQ13459 2157 aa10.4□□□□□ -0.74
HMGCLL1-206ENST00000428842 DYNC1I1O14576 645 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 SLC26A4O43511 780 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 TSPAN1O60635 241 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 CALCAP01258 141 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 CST5P28325 142 aaPredicted RBP10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 CYP2C18P33260 490 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 ZNF75DP51815 510 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 FKBP3Q00688 224 aaKnown RBP10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 TLE2Q04725 743 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 LRMPQ12912 555 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 STRN3Q13033 797 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 MXD4Q14582 209 aaPredicted RBP10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 NOLC1Q14978 699 aaKnown RBP eCLIP10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 MAPK6Q16659 721 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 BMT2Q1RMZ1 405 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 DEFB128Q7Z7B8 93 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 ACO2Q99798 780 aaKnown RBP10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 KATNAL1Q9BW62 490 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 SEL1LQ9UBV2 794 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 DACH1Q9UI36 760 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 PIN4Q9Y237 131 aaKnown RBP10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 ABLIM1O14639 778 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 N4BP3O15049 544 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 CXCL8P10145 99 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 GCLMP48507 274 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 GPNMBQ14956 572 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 C1orf220Q5T0J3 134 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 CDCA2Q69YH5 1023 aaPredicted RBP10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 CATSPER4Q7RTX7 472 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 FAM228AQ86W67 206 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 DRC7Q8IY82 874 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 SPIRE2Q8WWL2 714 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 PI4K2AQ9BTU6 479 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 MSTO1Q9BUK6 570 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 PDZD7Q9H5P4 517 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 PRDM5Q9NQX1 630 aaPredicted RBP10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 TRAF3IP3Q9Y228 551 aa10.39□□□□□ -0.75
HMGCLL1-206ENST00000428842 SMIM35A0A1B0GVV1 85 aa10.38□□□□□ -0.75
HMGCLL1-206ENST00000428842 SMTNL1A8MU46 457 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms