RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 TUBGCP2Q9BSJ2 902 aa11.86□□□□□ -0.51
CRIM1-204ENST00000428774 MRPL4Q9BYD3 311 aaKnown RBP11.86□□□□□ -0.51
CRIM1-204ENST00000428774 INO80BQ9C086 356 aaPredicted RBP11.86□□□□□ -0.51
CRIM1-204ENST00000428774 VPS16Q9H269 839 aa11.86□□□□□ -0.51
CRIM1-204ENST00000428774 FZD8Q9H461 694 aa11.86□□□□□ -0.51
CRIM1-204ENST00000428774 CDHR5Q9HBB8 845 aa11.86□□□□□ -0.51
CRIM1-204ENST00000428774 STARD7Q9NQZ5 370 aa11.86□□□□□ -0.51
CRIM1-204ENST00000428774 PRMT7Q9NVM4 692 aaPredicted RBP11.86□□□□□ -0.51
CRIM1-204ENST00000428774 STYXL1Q9Y6J8 313 aa11.86□□□□□ -0.51
CRIM1-204ENST00000428774 PDCD11Q14690 1871 aaKnown RBP11.86□□□□□ -0.51
CRIM1-204ENST00000428774 DNAH12Q6ZR08 3092 aa11.86□□□□□ -0.51
CRIM1-204ENST00000428774 A0A0U1RQG5 324 aaPredicted RBP11.85□□□□□ -0.51
CRIM1-204ENST00000428774 GOLGA8IPA6NC78 632 aa11.85□□□□□ -0.51
CRIM1-204ENST00000428774 LRRC10BA6NIK2 292 aa11.85□□□□□ -0.51
CRIM1-204ENST00000428774 GOLGA8JA6NMD2 632 aa11.85□□□□□ -0.51
CRIM1-204ENST00000428774 ACKR2O00590 384 aa11.85□□□□□ -0.51
CRIM1-204ENST00000428774 TEX33O43247 280 aa11.85□□□□□ -0.51
CRIM1-204ENST00000428774 TSPAN1O60635 241 aa11.85□□□□□ -0.51
CRIM1-204ENST00000428774 EXOC3O60645 756 aa11.85□□□□□ -0.51
CRIM1-204ENST00000428774 CAPN15O75808 1086 aa11.85□□□□□ -0.51
CRIM1-204ENST00000428774 GNA14O95837 355 aa11.85□□□□□ -0.51
CRIM1-204ENST00000428774 COL6A1P12109 1028 aa11.85□□□□□ -0.51
CRIM1-204ENST00000428774 GARTP22102 1010 aa11.85□□□□□ -0.51
CRIM1-204ENST00000428774 FGFR4P22455 802 aa11.85□□□□□ -0.51
CRIM1-204ENST00000428774 EEF1DP3Q658K8 133 aa11.85□□□□□ -0.51
CRIM1-204ENST00000428774 ZPBP2Q6X784 338 aa11.85□□□□□ -0.51
CRIM1-204ENST00000428774 SRGAP1Q7Z6B7 1085 aa11.85□□□□□ -0.51
CRIM1-204ENST00000428774 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.85□□□□□ -0.51
CRIM1-204ENST00000428774 UBE2Q1Q7Z7E8 422 aa11.85□□□□□ -0.51
CRIM1-204ENST00000428774 FAM186BQ8IYM0 893 aa11.85□□□□□ -0.51
CRIM1-204ENST00000428774 XXYLT1Q8NBI6 393 aa11.85□□□□□ -0.51
CRIM1-204ENST00000428774 ANKRD20A12PQ8NF67 263 aa11.85□□□□□ -0.51
CRIM1-204ENST00000428774 TMEM40Q8WWA1 233 aa11.85□□□□□ -0.51
CRIM1-204ENST00000428774 ANP32BQ92688 251 aaKnown RBP11.85□□□□□ -0.51
CRIM1-204ENST00000428774 SAAL1Q96ER3 474 aa11.85□□□□□ -0.51
CRIM1-204ENST00000428774 BORCS6Q96GS4 357 aa11.85□□□□□ -0.51
CRIM1-204ENST00000428774 ZBTB45Q96K62 511 aaPredicted RBP11.85□□□□□ -0.51
CRIM1-204ENST00000428774 ACO2Q99798 780 aaKnown RBP11.85□□□□□ -0.51
CRIM1-204ENST00000428774 RTN4Q9NQC3 1192 aaKnown RBP11.85□□□□□ -0.51
CRIM1-204ENST00000428774 TRMT13Q9NUP7 481 aaKnown RBP11.85□□□□□ -0.51
CRIM1-204ENST00000428774 ANKFY1Q9P2R3 1169 aa11.85□□□□□ -0.51
CRIM1-204ENST00000428774 N4BP3O15049 544 aa11.84□□□□□ -0.51
CRIM1-204ENST00000428774 PRKCSHP14314 528 aaPredicted RBP11.84□□□□□ -0.51
CRIM1-204ENST00000428774 DARSP14868 501 aaKnown RBP11.84□□□□□ -0.51
CRIM1-204ENST00000428774 PROZP22891 400 aa11.84□□□□□ -0.51
CRIM1-204ENST00000428774 PSMC2P35998 433 aaKnown RBP11.84□□□□□ -0.51
CRIM1-204ENST00000428774 PBX1P40424 430 aa11.84□□□□□ -0.51
CRIM1-204ENST00000428774 ATN1P54259 1190 aaPredicted RBP11.84□□□□□ -0.51
CRIM1-204ENST00000428774 MRPS6P82932 125 aaKnown RBP11.84□□□□□ -0.51
CRIM1-204ENST00000428774 MGAT3Q09327 533 aa11.84□□□□□ -0.51
CRIM1-204ENST00000428774 PRPF4BQ13523 1007 aaKnown RBP11.84□□□□□ -0.51
CRIM1-204ENST00000428774 NR1I3Q14994 352 aa11.84□□□□□ -0.51
CRIM1-204ENST00000428774 SNX17Q15036 470 aa11.84□□□□□ -0.51
CRIM1-204ENST00000428774 PTGISQ16647 500 aa11.84□□□□□ -0.51
CRIM1-204ENST00000428774 TRIM71Q2Q1W2 868 aaKnown RBP11.84□□□□□ -0.51
CRIM1-204ENST00000428774 ATF7IP2Q5U623 682 aa11.84□□□□□ -0.51
CRIM1-204ENST00000428774 FRMD5Q7Z6J6 570 aa11.84□□□□□ -0.51
CRIM1-204ENST00000428774 CDR2LQ86X02 465 aaPredicted RBP11.84□□□□□ -0.51
CRIM1-204ENST00000428774 CBWD2Q8IUF1 395 aa11.84□□□□□ -0.51
CRIM1-204ENST00000428774 GPD1LQ8N335 351 aa11.84□□□□□ -0.51
CRIM1-204ENST00000428774 PLEKHO2Q8TD55 490 aa11.84□□□□□ -0.51
CRIM1-204ENST00000428774 POMGNT1Q8WZA1 660 aa11.84□□□□□ -0.51
CRIM1-204ENST00000428774 VTI1AQ96AJ9 217 aa11.84□□□□□ -0.51
CRIM1-204ENST00000428774 FBXL18Q96ME1 805 aa11.84□□□□□ -0.51
CRIM1-204ENST00000428774 NOC4LQ9BVI4 516 aaKnown RBP11.84□□□□□ -0.51
CRIM1-204ENST00000428774 GCOM2Q9BZD3 368 aaPredicted RBP11.84□□□□□ -0.51
CRIM1-204ENST00000428774 SENP6Q9GZR1 1112 aaPredicted RBP11.84□□□□□ -0.51
CRIM1-204ENST00000428774 PDZD7Q9H5P4 517 aa11.84□□□□□ -0.51
CRIM1-204ENST00000428774 ARMCX3Q9UH62 379 aaPredicted RBP11.84□□□□□ -0.51
CRIM1-204ENST00000428774 GINS2Q9Y248 185 aa11.84□□□□□ -0.51
CRIM1-204ENST00000428774 TRPV2Q9Y5S1 764 aa11.84□□□□□ -0.51
CRIM1-204ENST00000428774 CDY2AQ9Y6F7 541 aa11.84□□□□□ -0.51
CRIM1-204ENST00000428774 A0A0B4J269 797 aa11.83□□□□□ -0.52
CRIM1-204ENST00000428774 MAPK13O15264 365 aa11.83□□□□□ -0.52
CRIM1-204ENST00000428774 FAM189A1O60320 539 aa11.83□□□□□ -0.52
CRIM1-204ENST00000428774 B4GALT4O60513 344 aa11.83□□□□□ -0.52
CRIM1-204ENST00000428774 TOM1L1O75674 476 aa11.83□□□□□ -0.52
CRIM1-204ENST00000428774 CTSHP09668 335 aa11.83□□□□□ -0.52
CRIM1-204ENST00000428774 TRIM49P0CI25 452 aa11.83□□□□□ -0.52
CRIM1-204ENST00000428774 TRIM49CP0CI26 452 aa11.83□□□□□ -0.52
CRIM1-204ENST00000428774 HARSP12081 509 aaKnown RBP11.83□□□□□ -0.52
CRIM1-204ENST00000428774 ARF4P18085 180 aaPredicted RBP11.83□□□□□ -0.52
CRIM1-204ENST00000428774 PTK7Q13308 1070 aa11.83□□□□□ -0.52
CRIM1-204ENST00000428774 NOLC1Q14978 699 aaKnown RBP eCLIP11.83□□□□□ -0.52
CRIM1-204ENST00000428774 LRRC26Q2I0M4 334 aa11.83□□□□□ -0.52
CRIM1-204ENST00000428774 ZNF568Q3ZCX4 644 aa11.83□□□□□ -0.52
CRIM1-204ENST00000428774 FILIP1LQ4L180 1135 aa11.83□□□□□ -0.52
CRIM1-204ENST00000428774 VWA3BQ502W6 1294 aa11.83□□□□□ -0.52
CRIM1-204ENST00000428774 DCAF17Q5H9S7 520 aaPredicted RBP11.83□□□□□ -0.52
CRIM1-204ENST00000428774 ZBTB41Q5SVQ8 909 aa11.83□□□□□ -0.52
CRIM1-204ENST00000428774 MPZL3Q6UWV2 235 aa11.83□□□□□ -0.52
CRIM1-204ENST00000428774 TSHZ1Q6ZSZ6 1077 aa11.83□□□□□ -0.52
CRIM1-204ENST00000428774 TMC6Q7Z403 805 aa11.83□□□□□ -0.52
CRIM1-204ENST00000428774 RPAINQ86UA6 219 aa11.83□□□□□ -0.52
CRIM1-204ENST00000428774 VSTM4Q8IW00 320 aa11.83□□□□□ -0.52
CRIM1-204ENST00000428774 NME8Q8N427 588 aa11.83□□□□□ -0.52
CRIM1-204ENST00000428774 SPC24Q8NBT2 197 aa11.83□□□□□ -0.52
CRIM1-204ENST00000428774 SLC35C1Q96A29 364 aa11.83□□□□□ -0.52
CRIM1-204ENST00000428774 CPB2Q96IY4 423 aa11.83□□□□□ -0.52
CRIM1-204ENST00000428774 PRIMPOLQ96LW4 560 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms