RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 CENPQQ7L2Z9 268 aaPredicted RBP20.45■□□□□ 0.86
UPK3BP1-201ENST00000428678 RNF149Q8NC42 400 aa20.45■□□□□ 0.86
UPK3BP1-201ENST00000428678 DAGLBQ8NCG7 672 aa20.45■□□□□ 0.86
UPK3BP1-201ENST00000428678 STAMQ92783 540 aa20.45■□□□□ 0.86
UPK3BP1-201ENST00000428678 DHX33Q9H6R0 707 aaKnown RBP20.45■□□□□ 0.86
UPK3BP1-201ENST00000428678 WDR6Q9NNW5 1121 aaKnown RBP20.45■□□□□ 0.86
UPK3BP1-201ENST00000428678 UBN1Q9NPG3 1134 aa20.45■□□□□ 0.86
UPK3BP1-201ENST00000428678 VAV3Q9UKW4 847 aa20.45■□□□□ 0.86
UPK3BP1-201ENST00000428678 RFPL2O75678 378 aa20.44■□□□□ 0.86
UPK3BP1-201ENST00000428678 P4HBP07237 508 aaKnown RBP20.44■□□□□ 0.86
UPK3BP1-201ENST00000428678 NPY5RQ15761 445 aa20.44■□□□□ 0.86
UPK3BP1-201ENST00000428678 CYP26C1Q6V0L0 522 aa20.44■□□□□ 0.86
UPK3BP1-201ENST00000428678 KRT25Q7Z3Z0 450 aa20.44■□□□□ 0.86
UPK3BP1-201ENST00000428678 COLGALT2Q8IYK4 626 aa20.44■□□□□ 0.86
UPK3BP1-201ENST00000428678 SMG8Q8ND04 991 aaKnown RBP20.44■□□□□ 0.86
UPK3BP1-201ENST00000428678 CNNM3Q8NE01 707 aa20.44■□□□□ 0.86
UPK3BP1-201ENST00000428678 KCNG4Q8TDN1 519 aa20.44■□□□□ 0.86
UPK3BP1-201ENST00000428678 SMG7Q92540 1137 aaKnown RBP20.44■□□□□ 0.86
UPK3BP1-201ENST00000428678 AIFM3Q96NN9 605 aa20.44■□□□□ 0.86
UPK3BP1-201ENST00000428678 WRAP73Q9P2S5 460 aaPredicted RBP20.44■□□□□ 0.86
UPK3BP1-201ENST00000428678 WNT16Q9UBV4 365 aa20.44■□□□□ 0.86
UPK3BP1-201ENST00000428678 CA14Q9ULX7 337 aa20.44■□□□□ 0.86
UPK3BP1-201ENST00000428678 PPME1Q9Y570 386 aa20.44■□□□□ 0.86
UPK3BP1-201ENST00000428678 IPPQ9Y573 584 aa20.44■□□□□ 0.86
UPK3BP1-201ENST00000428678 KRBA1A5PL33 1030 aa20.43■□□□□ 0.86
UPK3BP1-201ENST00000428678 SPATA31D3P0C874 917 aa20.43■□□□□ 0.86
UPK3BP1-201ENST00000428678 MLH1P40692 756 aa20.43■□□□□ 0.86
UPK3BP1-201ENST00000428678 EMC2Q15006 297 aa20.43■□□□□ 0.86
UPK3BP1-201ENST00000428678 GALNT17Q6IS24 598 aa20.43■□□□□ 0.86
UPK3BP1-201ENST00000428678 SPATA31D4Q6ZUB0 917 aa20.43■□□□□ 0.86
UPK3BP1-201ENST00000428678 ERMP1Q7Z2K6 904 aa20.43■□□□□ 0.86
UPK3BP1-201ENST00000428678 TCP11Q8WWU5 503 aa20.43■□□□□ 0.86
UPK3BP1-201ENST00000428678 FAM20AQ96MK3 541 aa20.43■□□□□ 0.86
UPK3BP1-201ENST00000428678 MYADMQ96S97 322 aa20.43■□□□□ 0.86
UPK3BP1-201ENST00000428678 GAD1Q99259 594 aa20.43■□□□□ 0.86
UPK3BP1-201ENST00000428678 LXNQ9BS40 222 aa20.43■□□□□ 0.86
UPK3BP1-201ENST00000428678 EIF2AQ9BY44 585 aaKnown RBP20.43■□□□□ 0.86
UPK3BP1-201ENST00000428678 EPS15L1Q9UBC2 864 aa20.43■□□□□ 0.86
UPK3BP1-201ENST00000428678 TDRD15B5MCY1 1934 aaKnown RBP20.43■□□□□ 0.86
UPK3BP1-201ENST00000428678 CEP250Q9BV73 2442 aa20.43■□□□□ 0.86
UPK3BP1-201ENST00000428678 ARL5CA6NH57 179 aa20.42■□□□□ 0.86
UPK3BP1-201ENST00000428678 ASAP2O43150 1006 aa20.42■□□□□ 0.86
UPK3BP1-201ENST00000428678 GAS2O43903 313 aaKnown RBP20.42■□□□□ 0.86
UPK3BP1-201ENST00000428678 SCNN1GP51170 649 aa20.42■□□□□ 0.86
UPK3BP1-201ENST00000428678 TOB2Q14106 344 aaPredicted RBP20.42■□□□□ 0.86
UPK3BP1-201ENST00000428678 KIAA0319Q5VV43 1072 aa20.42■□□□□ 0.86
UPK3BP1-201ENST00000428678 CPLX2Q6PUV4 134 aaKnown RBP20.42■□□□□ 0.86
UPK3BP1-201ENST00000428678 FERMT3Q86UX7 667 aa20.42■□□□□ 0.86
UPK3BP1-201ENST00000428678 PALB2Q86YC2 1186 aa20.42■□□□□ 0.86
UPK3BP1-201ENST00000428678 SLC44A3Q8N4M1 653 aa20.42■□□□□ 0.86
UPK3BP1-201ENST00000428678 APOL6Q9BWW8 343 aa20.42■□□□□ 0.86
UPK3BP1-201ENST00000428678 RNF39Q9H2S5 420 aa20.42■□□□□ 0.86
UPK3BP1-201ENST00000428678 PIDD1Q9HB75 910 aa20.42■□□□□ 0.86
UPK3BP1-201ENST00000428678 RXFP1Q9HBX9 757 aa20.42■□□□□ 0.86
UPK3BP1-201ENST00000428678 KCNMB3Q9NPA1 279 aa20.42■□□□□ 0.86
UPK3BP1-201ENST00000428678 KCNJ14Q9UNX9 436 aa20.42■□□□□ 0.86
UPK3BP1-201ENST00000428678 HES2Q9Y543 173 aa20.42■□□□□ 0.86
UPK3BP1-201ENST00000428678 CCDC194A0A1B0GVG4 234 aa20.41■□□□□ 0.86
UPK3BP1-201ENST00000428678 F8W810 466 aa20.41■□□□□ 0.86
UPK3BP1-201ENST00000428678 MARCH6O60337 910 aa20.41■□□□□ 0.86
UPK3BP1-201ENST00000428678 TSPAN1O60635 241 aa20.41■□□□□ 0.86
UPK3BP1-201ENST00000428678 NR1I2O75469 434 aa20.41■□□□□ 0.86
UPK3BP1-201ENST00000428678 SRFP11831 508 aa20.41■□□□□ 0.86
UPK3BP1-201ENST00000428678 YWHABP31946 246 aaKnown RBP20.41■□□□□ 0.86
UPK3BP1-201ENST00000428678 DSG1Q02413 1049 aa20.41■□□□□ 0.86
UPK3BP1-201ENST00000428678 DSC1Q08554 894 aa20.41■□□□□ 0.86
UPK3BP1-201ENST00000428678 XKR9Q5GH70 373 aa20.41■□□□□ 0.86
UPK3BP1-201ENST00000428678 NOTUMQ6P988 496 aa20.41■□□□□ 0.86
UPK3BP1-201ENST00000428678 OTUD6AQ7L8S5 288 aa20.41■□□□□ 0.86
UPK3BP1-201ENST00000428678 RNF168Q8IYW5 571 aaPredicted RBP20.41■□□□□ 0.86
UPK3BP1-201ENST00000428678 FAM177A1Q8N128 213 aaPredicted RBP20.41■□□□□ 0.86
UPK3BP1-201ENST00000428678 ZNF707Q96C28 371 aaPredicted RBP20.41■□□□□ 0.86
UPK3BP1-201ENST00000428678 CPB2Q96IY4 423 aa20.41■□□□□ 0.86
UPK3BP1-201ENST00000428678 ZFP42Q96MM3 310 aa20.41■□□□□ 0.86
UPK3BP1-201ENST00000428678 LARP6Q9BRS8 491 aaKnown RBP20.41■□□□□ 0.86
UPK3BP1-201ENST00000428678 RHOBTB2Q9BYZ6 727 aa20.41■□□□□ 0.86
UPK3BP1-201ENST00000428678 TBC1D17Q9HA65 648 aa20.41■□□□□ 0.86
UPK3BP1-201ENST00000428678 RGL1Q9NZL6 768 aa20.41■□□□□ 0.86
UPK3BP1-201ENST00000428678 ARID2Q68CP9 1835 aa20.41■□□□□ 0.86
UPK3BP1-201ENST00000428678 MTCL1Q9Y4B5 1905 aaKnown RBP20.41■□□□□ 0.86
UPK3BP1-201ENST00000428678 OTOGLQ3ZCN5 2332 aa20.41■□□□□ 0.86
UPK3BP1-201ENST00000428678 GCFC2P16383 781 aaKnown RBP20.4■□□□□ 0.86
UPK3BP1-201ENST00000428678 AXLP30530 894 aa20.4■□□□□ 0.86
UPK3BP1-201ENST00000428678 NCBP1Q09161 790 aaKnown RBP20.4■□□□□ 0.86
UPK3BP1-201ENST00000428678 STK3Q13188 491 aa20.4■□□□□ 0.86
UPK3BP1-201ENST00000428678 NCAPH2Q6IBW4 605 aa20.4■□□□□ 0.86
UPK3BP1-201ENST00000428678 RUFY3Q7L099 469 aa20.4■□□□□ 0.86
UPK3BP1-201ENST00000428678 NEK8Q86SG6 692 aa20.4■□□□□ 0.86
UPK3BP1-201ENST00000428678 GLYCTKQ8IVS8 523 aa20.4■□□□□ 0.86
UPK3BP1-201ENST00000428678 C4orf19Q8IY42 314 aa20.4■□□□□ 0.86
UPK3BP1-201ENST00000428678 RIN2Q8WYP3 895 aaPredicted RBP20.4■□□□□ 0.86
UPK3BP1-201ENST00000428678 NXPE3Q969Y0 559 aa20.4■□□□□ 0.86
UPK3BP1-201ENST00000428678 CCDC51Q96ER9 411 aa20.4■□□□□ 0.86
UPK3BP1-201ENST00000428678 B3GALT6Q96L58 329 aa20.4■□□□□ 0.86
UPK3BP1-201ENST00000428678 MTRQ99707 1265 aa20.4■□□□□ 0.86
UPK3BP1-201ENST00000428678 COLEC11Q9BWP8 271 aa20.4■□□□□ 0.86
UPK3BP1-201ENST00000428678 TRIM6Q9C030 488 aaPredicted RBP20.4■□□□□ 0.86
UPK3BP1-201ENST00000428678 MIOSQ9NXC5 875 aa20.4■□□□□ 0.86
UPK3BP1-201ENST00000428678 R4GN57 208 aa20.4■□□□□ 0.86
UPK3BP1-201ENST00000428678 INO80B-WBP1J3KQ70 363 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms