RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 ARL2P36404 184 aa11.27□□□□□ -0.6
HDAC9-210ENST00000428307 MATR3P43243 847 aaKnown RBP eCLIP11.27□□□□□ -0.6
HDAC9-210ENST00000428307 CELF3Q5SZQ8 465 aaKnown RBP11.27□□□□□ -0.6
HDAC9-210ENST00000428307 FAM160B1Q5W0V3 765 aa11.27□□□□□ -0.6
HDAC9-210ENST00000428307 LMBRD2Q68DH5 695 aaPredicted RBP11.27□□□□□ -0.6
HDAC9-210ENST00000428307 KRT39Q6A163 491 aa11.27□□□□□ -0.6
HDAC9-210ENST00000428307 DHX37Q8IY37 1157 aaKnown RBP11.27□□□□□ -0.6
HDAC9-210ENST00000428307 GPD1LQ8N335 351 aa11.27□□□□□ -0.6
HDAC9-210ENST00000428307 TAS1R2Q8TE23 839 aa11.27□□□□□ -0.6
HDAC9-210ENST00000428307 FBXL18Q96ME1 805 aa11.27□□□□□ -0.6
HDAC9-210ENST00000428307 CEP89Q96ST8 783 aa11.27□□□□□ -0.6
HDAC9-210ENST00000428307 HINFPQ9BQA5 517 aa11.27□□□□□ -0.6
HDAC9-210ENST00000428307 ACP6Q9NPH0 428 aa11.27□□□□□ -0.6
HDAC9-210ENST00000428307 PDHXO00330 501 aa11.27□□□□□ -0.61
HDAC9-210ENST00000428307 ECM2O94769 699 aaPredicted RBP11.27□□□□□ -0.61
HDAC9-210ENST00000428307 H2AFZP0C0S5 128 aa11.27□□□□□ -0.61
HDAC9-210ENST00000428307 ABCB4P21439 1286 aa11.27□□□□□ -0.61
HDAC9-210ENST00000428307 CYP24A1Q07973 514 aa11.27□□□□□ -0.61
HDAC9-210ENST00000428307 TARBP2Q15633 366 aaKnown RBP11.27□□□□□ -0.61
HDAC9-210ENST00000428307 H2AFVQ71UI9 128 aa11.27□□□□□ -0.61
HDAC9-210ENST00000428307 SV2AQ7L0J3 742 aa11.27□□□□□ -0.61
HDAC9-210ENST00000428307 PALB2Q86YC2 1186 aa11.27□□□□□ -0.61
HDAC9-210ENST00000428307 PRPF31Q8WWY3 499 aaKnown RBP11.27□□□□□ -0.61
HDAC9-210ENST00000428307 MFSD14AQ96MC6 490 aa11.27□□□□□ -0.61
HDAC9-210ENST00000428307 GPR20Q99678 358 aa11.27□□□□□ -0.61
HDAC9-210ENST00000428307 TARS2Q9BW92 718 aaKnown RBP11.27□□□□□ -0.61
HDAC9-210ENST00000428307 ANKFY1Q9P2R3 1169 aa11.27□□□□□ -0.61
HDAC9-210ENST00000428307 HYOU1Q9Y4L1 999 aa11.27□□□□□ -0.61
HDAC9-210ENST00000428307 LCTP09848 1927 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 LOXHD1Q8IVV2 1947 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 GRID2IPA4D2P6 1211 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 ZNF233A6NK53 670 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 H0YCG3 227 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 CCDC172P0C7W6 258 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 TCP1P17987 556 aaKnown RBP11.26□□□□□ -0.61
HDAC9-210ENST00000428307 TNFAIP3P21580 790 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 GARTP22102 1010 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 NAMPTP43490 491 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 GALCP54803 685 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 CKAP4Q07065 602 aaKnown RBP11.26□□□□□ -0.61
HDAC9-210ENST00000428307 C2orf54Q08AI8 447 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 SEZ6Q53EL9 994 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 GJC2Q5T442 439 aaPredicted RBP11.26□□□□□ -0.61
HDAC9-210ENST00000428307 CC2D1AQ6P1N0 951 aaPredicted RBP11.26□□□□□ -0.61
HDAC9-210ENST00000428307 LRRC71Q8N4P6 559 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 GPRC5AQ8NFJ5 357 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 SLC30A5Q8TAD4 765 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 OLIG1Q8TAK6 271 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 SLC20A1Q8WUM9 679 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 ZBTB10Q96DT7 871 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 MS4A14Q96JA4 679 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 ZNF668Q96K58 619 aaPredicted RBP11.26□□□□□ -0.61
HDAC9-210ENST00000428307 PI4K2AQ9BTU6 479 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 ARFGAP3Q9NP61 516 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 TAS2R14Q9NYV8 317 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 PCDHGC5Q9Y5F6 944 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 CCL15-CCL14A0A0B4J2E2 113 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 BTBD19C9JJ37 291 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 ZMYND10O75800 440 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 EDN1P05305 212 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 SRGAP2CP0DJJ0 459 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 HARSP12081 509 aaKnown RBP11.26□□□□□ -0.61
HDAC9-210ENST00000428307 PRLRP16471 622 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 COPB2P35606 906 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 NLRP11P59045 1033 aaKnown RBP11.26□□□□□ -0.61
HDAC9-210ENST00000428307 RNASE9P60153 205 aaKnown RBP11.26□□□□□ -0.61
HDAC9-210ENST00000428307 VSNL1P62760 191 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 TUBB4BP68371 445 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 MRPS25P82663 173 aaKnown RBP11.26□□□□□ -0.61
HDAC9-210ENST00000428307 CAPSQ13938 189 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 CCL15Q16663 113 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 CCDC181Q5TID7 509 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 MSANTD4Q8NCY6 345 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 FBXL13Q8NEE6 735 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 AFAP1L1Q8TED9 768 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 TRAPPC12Q8WVT3 735 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 ZBTB9Q96C00 473 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 KREMEN1Q96MU8 473 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 HAPLN2Q9GZV7 340 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 TMEM8AQ9HCN3 771 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 OGFRQ9NZT2 677 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 KCNG1Q9UIX4 513 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 AGO2Q9UKV8 859 aaKnown RBP11.26□□□□□ -0.61
HDAC9-210ENST00000428307 PNMA3Q9UL41 463 aa11.26□□□□□ -0.61
HDAC9-210ENST00000428307 TTLL13PA6NNM8 815 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 CYP26A1O43174 497 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 ZRANB2O95218 330 aaKnown RBP eCLIP11.25□□□□□ -0.61
HDAC9-210ENST00000428307 TNNI1P19237 187 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 RFX1P22670 979 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 ANXA13P27216 316 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 RFC5P40937 340 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 WNT7BP56706 349 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 ZBTB41Q5SVQ8 909 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 CCDC62Q6P9F0 684 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 KCNV1Q6PIU1 500 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 USP37Q86T82 979 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 TMC2Q8TDI7 906 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 MS4A4AQ96JQ5 239 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 SYT11Q9BT88 431 aa11.25□□□□□ -0.61
HDAC9-210ENST00000428307 PDE11AQ9HCR9 933 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms