RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 PAK6Q9NQU5 681 aaPredicted RBP13.18□□□□□ -0.3
RFC4-206ENST00000427785 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.18□□□□□ -0.3
RFC4-206ENST00000427785 CENPFP49454 3210 aa13.18□□□□□ -0.3
RFC4-206ENST00000427785 CNTNAP2Q9UHC6 1331 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 SCN5AQ14524 2016 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 GPR32O75388 356 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 CABYRO75952 493 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 CTSHP09668 335 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 TRIM49P0CI25 452 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 TRIM49CP0CI26 452 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 GARTP22102 1010 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 PBX1P40424 430 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 KLK7P49862 253 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 PRPF4BQ13523 1007 aaKnown RBP13.17□□□□□ -0.3
RFC4-206ENST00000427785 ITGA7Q13683 1181 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 MYBPC2Q14324 1141 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 AMHR2Q16671 573 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 ZNF568Q3ZCX4 644 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 VWA3BQ502W6 1294 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 ZBTB41Q5SVQ8 909 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 FKBP15Q5T1M5 1219 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 ATF7IP2Q5U623 682 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 EEF1DP3Q658K8 133 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 SESTD1Q86VW0 696 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 CDR2LQ86X02 465 aaPredicted RBP13.17□□□□□ -0.3
RFC4-206ENST00000427785 CCDC155Q8N6L0 562 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 BORCS6Q96GS4 357 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 CPB2Q96IY4 423 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 GLT1D1Q96MS3 346 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 ACO2Q99798 780 aaKnown RBP13.17□□□□□ -0.3
RFC4-206ENST00000427785 TSEN34Q9BSV6 310 aaKnown RBP13.17□□□□□ -0.3
RFC4-206ENST00000427785 MSTO1Q9BUK6 570 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 RNF208Q9H0X6 261 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 NDST4Q9H3R1 872 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 FZD8Q9H461 694 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 MMRN2Q9H8L6 949 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 CDHR5Q9HBB8 845 aa13.17□□□□□ -0.3
RFC4-206ENST00000427785 PRMT7Q9NVM4 692 aaPredicted RBP13.17□□□□□ -0.3
RFC4-206ENST00000427785 KIAA0100Q14667 2235 aaKnown RBP13.17□□□□□ -0.3
RFC4-206ENST00000427785 LRRC10BA6NIK2 292 aa13.16□□□□□ -0.3
RFC4-206ENST00000427785 TULP1O00294 542 aaPredicted RBP13.16□□□□□ -0.3
RFC4-206ENST00000427785 ACKR2O00590 384 aa13.16□□□□□ -0.3
RFC4-206ENST00000427785 ABLIM1O14639 778 aa13.16□□□□□ -0.3
RFC4-206ENST00000427785 TSPAN1O60635 241 aa13.16□□□□□ -0.3
RFC4-206ENST00000427785 ERLIN2O94905 339 aa13.16□□□□□ -0.3
RFC4-206ENST00000427785 MRPS6P82932 125 aaKnown RBP13.16□□□□□ -0.3
RFC4-206ENST00000427785 POU5F1BQ06416 359 aa13.16□□□□□ -0.3
RFC4-206ENST00000427785 GOLGA8FQ08AF8 430 aa13.16□□□□□ -0.3
RFC4-206ENST00000427785 GOLGA8DPQ0D2H9 430 aa13.16□□□□□ -0.3
RFC4-206ENST00000427785 BFSP1Q12934 665 aa13.16□□□□□ -0.3
RFC4-206ENST00000427785 NOLC1Q14978 699 aaKnown RBP eCLIP13.16□□□□□ -0.3
RFC4-206ENST00000427785 SNRNP35Q16560 246 aaKnown RBP13.16□□□□□ -0.3
RFC4-206ENST00000427785 PTGISQ16647 500 aa13.16□□□□□ -0.3
RFC4-206ENST00000427785 TAF2Q6P1X5 1199 aa13.16□□□□□ -0.3
RFC4-206ENST00000427785 FBXO46Q6PJ61 603 aaPredicted RBP13.16□□□□□ -0.3
RFC4-206ENST00000427785 ZPBP2Q6X784 338 aa13.16□□□□□ -0.3
RFC4-206ENST00000427785 SRGAP1Q7Z6B7 1085 aa13.16□□□□□ -0.3
RFC4-206ENST00000427785 SERINC5Q86VE9 423 aa13.16□□□□□ -0.3
RFC4-206ENST00000427785 GPD1LQ8N335 351 aa13.16□□□□□ -0.3
RFC4-206ENST00000427785 ARRDC4Q8NCT1 418 aa13.16□□□□□ -0.3
RFC4-206ENST00000427785 PLEKHO2Q8TD55 490 aa13.16□□□□□ -0.3
RFC4-206ENST00000427785 SLC35C1Q96A29 364 aa13.16□□□□□ -0.3
RFC4-206ENST00000427785 FAM213AQ9BRX8 229 aa13.16□□□□□ -0.3
RFC4-206ENST00000427785 GCOM2Q9BZD3 368 aaPredicted RBP13.16□□□□□ -0.3
RFC4-206ENST00000427785 METTL14Q9HCE5 456 aaKnown RBP13.16□□□□□ -0.3
RFC4-206ENST00000427785 STARD7Q9NQZ5 370 aa13.16□□□□□ -0.3
RFC4-206ENST00000427785 TRMT13Q9NUP7 481 aaKnown RBP13.16□□□□□ -0.3
RFC4-206ENST00000427785 AGO2Q9UKV8 859 aaKnown RBP13.16□□□□□ -0.3
RFC4-206ENST00000427785 PHF24Q9UPV7 400 aa13.16□□□□□ -0.3
RFC4-206ENST00000427785 STYXL1Q9Y6J8 313 aa13.16□□□□□ -0.3
RFC4-206ENST00000427785 A0A0U1RQG5 324 aaPredicted RBP13.15□□□□□ -0.3
RFC4-206ENST00000427785 GOLGA6L6A8MZA4 724 aa13.15□□□□□ -0.3
RFC4-206ENST00000427785 EXTL3O43909 919 aa13.15□□□□□ -0.3
RFC4-206ENST00000427785 AFPP02771 609 aaKnown RBP13.15□□□□□ -0.3
RFC4-206ENST00000427785 KRT13P13646 458 aa13.15□□□□□ -0.3
RFC4-206ENST00000427785 DARSP14868 501 aaKnown RBP13.15□□□□□ -0.3
RFC4-206ENST00000427785 CTCFP49711 727 aaPredicted RBP13.15□□□□□ -0.3
RFC4-206ENST00000427785 KCNH2Q12809 1159 aa13.15□□□□□ -0.3
RFC4-206ENST00000427785 ARID5BQ14865 1188 aa13.15□□□□□ -0.3
RFC4-206ENST00000427785 SNX17Q15036 470 aa13.15□□□□□ -0.3
RFC4-206ENST00000427785 SYCP1Q15431 976 aa13.15□□□□□ -0.3
RFC4-206ENST00000427785 FAM187BQ17R55 369 aa13.15□□□□□ -0.3
RFC4-206ENST00000427785 SEZ6Q53EL9 994 aa13.15□□□□□ -0.3
RFC4-206ENST00000427785 SPECC1LQ69YQ0 1117 aa13.15□□□□□ -0.3
RFC4-206ENST00000427785 SLFN12LQ6IEE8 588 aa13.15□□□□□ -0.3
RFC4-206ENST00000427785 MPZL3Q6UWV2 235 aa13.15□□□□□ -0.3
RFC4-206ENST00000427785 TMEM40Q8WWA1 233 aa13.15□□□□□ -0.3
RFC4-206ENST00000427785 DHX38Q92620 1227 aaKnown RBP13.15□□□□□ -0.3
RFC4-206ENST00000427785 ZNF333Q96JL9 665 aa13.15□□□□□ -0.3
RFC4-206ENST00000427785 CDT1Q9H211 546 aa13.15□□□□□ -0.3
RFC4-206ENST00000427785 PDZD7Q9H5P4 517 aa13.15□□□□□ -0.3
RFC4-206ENST00000427785 TOPORSQ9NS56 1045 aaPredicted RBP13.15□□□□□ -0.3
RFC4-206ENST00000427785 TRPV2Q9Y5S1 764 aa13.15□□□□□ -0.3
RFC4-206ENST00000427785 CDY2AQ9Y6F7 541 aa13.15□□□□□ -0.3
RFC4-206ENST00000427785 ITIH6Q6UXX5 1313 aa13.14□□□□□ -0.31
RFC4-206ENST00000427785 A0A0B4J269 797 aa13.14□□□□□ -0.31
RFC4-206ENST00000427785 M0QZ92 97 aa13.14□□□□□ -0.31
RFC4-206ENST00000427785 DNM1LO00429 736 aa13.14□□□□□ -0.31
RFC4-206ENST00000427785 TOM1L1O75674 476 aa13.14□□□□□ -0.31
RFC4-206ENST00000427785 ARF4P18085 180 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms