RNA–Protein interactions for RNA: ENST00000427487.5

HDLBP-215, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 924 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-215ENST00000427487 THAP9Q9H5L6 903 aa13.2□□□□□ -0.3
HDLBP-215ENST00000427487 CBX8Q9HC52 389 aa13.2□□□□□ -0.3
HDLBP-215ENST00000427487 AGPAT5Q9NUQ2 364 aa13.2□□□□□ -0.3
HDLBP-215ENST00000427487 CTNND2Q9UQB3 1225 aa13.2□□□□□ -0.3
HDLBP-215ENST00000427487 MAPK8IP1Q9UQF2 711 aa13.2□□□□□ -0.3
HDLBP-215ENST00000427487 DNAH12Q6ZR08 3092 aa13.2□□□□□ -0.3
HDLBP-215ENST00000427487 A0A0B4J269 797 aa13.19□□□□□ -0.3
HDLBP-215ENST00000427487 ABLIM1O14639 778 aa13.19□□□□□ -0.3
HDLBP-215ENST00000427487 CETN3O15182 167 aa13.19□□□□□ -0.3
HDLBP-215ENST00000427487 SLC16A3O15427 465 aaKnown RBP13.19□□□□□ -0.3
HDLBP-215ENST00000427487 TSPAN1O60635 241 aa13.19□□□□□ -0.3
HDLBP-215ENST00000427487 CXCL10P02778 98 aa13.19□□□□□ -0.3
HDLBP-215ENST00000427487 ARF4P18085 180 aaPredicted RBP13.19□□□□□ -0.3
HDLBP-215ENST00000427487 MARSP56192 900 aaKnown RBP13.19□□□□□ -0.3
HDLBP-215ENST00000427487 TPM4P67936 248 aa13.19□□□□□ -0.3
HDLBP-215ENST00000427487 SPAG1Q07617 926 aa13.19□□□□□ -0.3
HDLBP-215ENST00000427487 UVSSAQ2YD98 709 aa13.19□□□□□ -0.3
HDLBP-215ENST00000427487 DCAF4L1Q3SXM0 396 aa13.19□□□□□ -0.3
HDLBP-215ENST00000427487 ATF7IP2Q5U623 682 aa13.19□□□□□ -0.3
HDLBP-215ENST00000427487 MPZL3Q6UWV2 235 aa13.19□□□□□ -0.3
HDLBP-215ENST00000427487 LRRC55Q6ZSA7 311 aa13.19□□□□□ -0.3
HDLBP-215ENST00000427487 CATSPER4Q7RTX7 472 aa13.19□□□□□ -0.3
HDLBP-215ENST00000427487 FAM114A1Q8IWE2 563 aa13.19□□□□□ -0.3
HDLBP-215ENST00000427487 DHX40Q8IX18 779 aaKnown RBP13.19□□□□□ -0.3
HDLBP-215ENST00000427487 CSGALNACT2Q8N6G5 542 aa13.19□□□□□ -0.3
HDLBP-215ENST00000427487 TMEM40Q8WWA1 233 aa13.19□□□□□ -0.3
HDLBP-215ENST00000427487 BICD1Q96G01 975 aa13.19□□□□□ -0.3
HDLBP-215ENST00000427487 DUSP9Q99956 384 aaKnown RBP13.19□□□□□ -0.3
HDLBP-215ENST00000427487 HTATIP2Q9BUP3 242 aa13.19□□□□□ -0.3
HDLBP-215ENST00000427487 TARS2Q9BW92 718 aaKnown RBP13.19□□□□□ -0.3
HDLBP-215ENST00000427487 FTHL17Q9BXU8 183 aa13.19□□□□□ -0.3
HDLBP-215ENST00000427487 HIPK3Q9H422 1215 aa13.19□□□□□ -0.3
HDLBP-215ENST00000427487 CDHR5Q9HBB8 845 aa13.19□□□□□ -0.3
HDLBP-215ENST00000427487 TANC1Q9C0D5 1861 aa13.19□□□□□ -0.3
HDLBP-215ENST00000427487 CLDN3O15551 220 aa13.18□□□□□ -0.3
HDLBP-215ENST00000427487 NR3C1P04150 777 aa13.18□□□□□ -0.3
HDLBP-215ENST00000427487 MCF2P10911 925 aa13.18□□□□□ -0.3
HDLBP-215ENST00000427487 ZNF18P17022 549 aa13.18□□□□□ -0.3
HDLBP-215ENST00000427487 NR2F2P24468 414 aa13.18□□□□□ -0.3
HDLBP-215ENST00000427487 ADSSP30520 456 aa13.18□□□□□ -0.3
HDLBP-215ENST00000427487 HOXA11P31270 313 aaPredicted RBP13.18□□□□□ -0.3
HDLBP-215ENST00000427487 PMS1P54277 932 aaKnown RBP13.18□□□□□ -0.3
HDLBP-215ENST00000427487 TMEM62Q0P6H9 643 aa13.18□□□□□ -0.3
HDLBP-215ENST00000427487 ADAM9Q13443 819 aa13.18□□□□□ -0.3
HDLBP-215ENST00000427487 LPIN1Q14693 890 aa13.18□□□□□ -0.3
HDLBP-215ENST00000427487 ARMCX5Q6P1M9 558 aa13.18□□□□□ -0.3
HDLBP-215ENST00000427487 SLC39A4Q6P5W5 647 aa13.18□□□□□ -0.3
HDLBP-215ENST00000427487 FAM228AQ86W67 206 aa13.18□□□□□ -0.3
HDLBP-215ENST00000427487 XXYLT1Q8NBI6 393 aa13.18□□□□□ -0.3
HDLBP-215ENST00000427487 ADPGKQ9BRR6 497 aa13.18□□□□□ -0.3
HDLBP-215ENST00000427487 METTL14Q9HCE5 456 aaKnown RBP13.18□□□□□ -0.3
HDLBP-215ENST00000427487 ERVK-5Q9HDB9 667 aa13.18□□□□□ -0.3
HDLBP-215ENST00000427487 TMEM39AQ9NV64 488 aa13.18□□□□□ -0.3
HDLBP-215ENST00000427487 GINS2Q9Y248 185 aa13.18□□□□□ -0.3
HDLBP-215ENST00000427487 ATP11BQ9Y2G3 1177 aa13.18□□□□□ -0.3
HDLBP-215ENST00000427487 NOC2LQ9Y3T9 749 aaKnown RBP13.18□□□□□ -0.3
HDLBP-215ENST00000427487 NFE2L3Q9Y4A8 694 aa13.18□□□□□ -0.3
HDLBP-215ENST00000427487 TRIM49BA6NDI0 452 aa13.17□□□□□ -0.3
HDLBP-215ENST00000427487 LRRC10BA6NIK2 292 aa13.17□□□□□ -0.3
HDLBP-215ENST00000427487 GOLGA6L19H0YKK7 550 aa13.17□□□□□ -0.3
HDLBP-215ENST00000427487 OGTO15294 1046 aa13.17□□□□□ -0.3
HDLBP-215ENST00000427487 EXTL3O43909 919 aa13.17□□□□□ -0.3
HDLBP-215ENST00000427487 TIMP1P01033 207 aa13.17□□□□□ -0.3
HDLBP-215ENST00000427487 PFKMP08237 780 aa13.17□□□□□ -0.3
HDLBP-215ENST00000427487 CTSHP09668 335 aa13.17□□□□□ -0.3
HDLBP-215ENST00000427487 SKIP12755 728 aa13.17□□□□□ -0.3
HDLBP-215ENST00000427487 EEF1GP26641 437 aaKnown RBP13.17□□□□□ -0.3
HDLBP-215ENST00000427487 RAB27AP51159 221 aa13.17□□□□□ -0.3
HDLBP-215ENST00000427487 PPP2R3AQ06190 1150 aa13.17□□□□□ -0.3
HDLBP-215ENST00000427487 PAK2Q13177 524 aa13.17□□□□□ -0.3
HDLBP-215ENST00000427487 NOLC1Q14978 699 aaKnown RBP eCLIP13.17□□□□□ -0.39e-6■□□□□ 9.6
HDLBP-215ENST00000427487 TPD52L1Q16890 204 aaPredicted RBP13.17□□□□□ -0.3
HDLBP-215ENST00000427487 CDKAL1Q5VV42 579 aa13.17□□□□□ -0.3
HDLBP-215ENST00000427487 SLC27A1Q6PCB7 646 aa13.17□□□□□ -0.3
HDLBP-215ENST00000427487 FRMD5Q7Z6J6 570 aa13.17□□□□□ -0.3
HDLBP-215ENST00000427487 USP37Q86T82 979 aa13.17□□□□□ -0.3
HDLBP-215ENST00000427487 GAS2L3Q86XJ1 694 aa13.17□□□□□ -0.3
HDLBP-215ENST00000427487 AOPEPQ8N6M6 819 aa13.17□□□□□ -0.3
HDLBP-215ENST00000427487 RSPH1Q8WYR4 309 aa13.17□□□□□ -0.3
HDLBP-215ENST00000427487 POMGNT1Q8WZA1 660 aa13.17□□□□□ -0.3
HDLBP-215ENST00000427487 TSPAN18Q96SJ8 248 aa13.17□□□□□ -0.3
HDLBP-215ENST00000427487 PDZD7Q9H5P4 517 aa13.17□□□□□ -0.3
HDLBP-215ENST00000427487 RNF216Q9NWF9 866 aaPredicted RBP13.17□□□□□ -0.3
HDLBP-215ENST00000427487 HSPBP1Q9NZL4 362 aa13.17□□□□□ -0.3
HDLBP-215ENST00000427487 AGO2Q9UKV8 859 aaKnown RBP13.17□□□□□ -0.3
HDLBP-215ENST00000427487 PADI3Q9ULW8 664 aa13.17□□□□□ -0.3
HDLBP-215ENST00000427487 ST3GAL5Q9UNP4 418 aa13.17□□□□□ -0.3
HDLBP-215ENST00000427487 FRMD4BQ9Y2L6 1034 aa13.17□□□□□ -0.3
HDLBP-215ENST00000427487 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.17□□□□□ -0.3
HDLBP-215ENST00000427487 ANKRD63C9JTQ0 380 aa13.16□□□□□ -0.3
HDLBP-215ENST00000427487 ZNF623O75123 536 aa13.16□□□□□ -0.3
HDLBP-215ENST00000427487 EDN1P05305 212 aa13.16□□□□□ -0.3
HDLBP-215ENST00000427487 EPB41P11171 864 aaKnown RBP13.16□□□□□ -0.3
HDLBP-215ENST00000427487 PSMC2P35998 433 aaKnown RBP13.16□□□□□ -0.3
HDLBP-215ENST00000427487 STX17P56962 302 aa13.16□□□□□ -0.3
HDLBP-215ENST00000427487 DSC3Q14574 896 aa13.16□□□□□ -0.3
HDLBP-215ENST00000427487 MBTPS1Q14703 1052 aa13.16□□□□□ -0.3
HDLBP-215ENST00000427487 PLEKHG4Q58EX7 1191 aa13.16□□□□□ -0.3
HDLBP-215ENST00000427487 INTS8Q75QN2 995 aaKnown RBP13.16□□□□□ -0.3
HDLBP-215ENST00000427487 GPD1LQ8N335 351 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms