RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 LZTS1Q9Y250 596 aa19■□□□□ 0.63
LMCD1-204ENST00000426878 ZMYM2Q9UBW7 1377 aa18.99■□□□□ 0.63
LMCD1-204ENST00000426878 TTLL13PA6NNM8 815 aa18.99■□□□□ 0.63
LMCD1-204ENST00000426878 CCDC169A6NNP5 214 aa18.99■□□□□ 0.63
LMCD1-204ENST00000426878 FGF18O76093 207 aa18.99■□□□□ 0.63
LMCD1-204ENST00000426878 FOXD4L5Q5VV16 416 aaPredicted RBP18.99■□□□□ 0.63
LMCD1-204ENST00000426878 URGCPQ8TCY9 931 aa18.99■□□□□ 0.63
LMCD1-204ENST00000426878 POF1BQ8WVV4 589 aa18.99■□□□□ 0.63
LMCD1-204ENST00000426878 ATXN2LQ8WWM7 1075 aaKnown RBP18.99■□□□□ 0.63
LMCD1-204ENST00000426878 FOXD4L4Q8WXT5 416 aaPredicted RBP18.99■□□□□ 0.63
LMCD1-204ENST00000426878 LARP4BQ92615 738 aaKnown RBP18.99■□□□□ 0.63
LMCD1-204ENST00000426878 PDZD7Q9H5P4 517 aa18.99■□□□□ 0.63
LMCD1-204ENST00000426878 NSUN3Q9H649 340 aaKnown RBP18.99■□□□□ 0.63
LMCD1-204ENST00000426878 KMT5AQ9NQR1 393 aa18.99■□□□□ 0.63
LMCD1-204ENST00000426878 PRDM6Q9NQX0 595 aa18.99■□□□□ 0.63
LMCD1-204ENST00000426878 THEGQ9P2T0 379 aa18.99■□□□□ 0.63
LMCD1-204ENST00000426878 COG5Q9UP83 839 aa18.99■□□□□ 0.63
LMCD1-204ENST00000426878 GIT1Q9Y2X7 761 aa18.99■□□□□ 0.63
LMCD1-204ENST00000426878 MYH11P35749 1972 aa18.98■□□□□ 0.63
LMCD1-204ENST00000426878 SFI1A8K8P3 1242 aa18.98■□□□□ 0.63
LMCD1-204ENST00000426878 EDN1P05305 212 aa18.98■□□□□ 0.63
LMCD1-204ENST00000426878 DNAJB1P25685 340 aa18.98■□□□□ 0.63
LMCD1-204ENST00000426878 ALDH7A1P49419 539 aaKnown RBP18.98■□□□□ 0.63
LMCD1-204ENST00000426878 SMTNP53814 917 aa18.98■□□□□ 0.63
LMCD1-204ENST00000426878 RAD51AP2Q09MP3 1159 aa18.98■□□□□ 0.63
LMCD1-204ENST00000426878 MCM6Q14566 821 aa18.98■□□□□ 0.63
LMCD1-204ENST00000426878 GPBP1Q86WP2 473 aa18.98■□□□□ 0.63
LMCD1-204ENST00000426878 THNSL1Q8IYQ7 743 aa18.98■□□□□ 0.63
LMCD1-204ENST00000426878 RNF39Q9H2S5 420 aa18.98■□□□□ 0.63
LMCD1-204ENST00000426878 SPG21Q9NZD8 308 aa18.98■□□□□ 0.63
LMCD1-204ENST00000426878 LARSQ9P2J5 1176 aaKnown RBP18.98■□□□□ 0.63
LMCD1-204ENST00000426878 PLXNA4Q9HCM2 1894 aa18.97■□□□□ 0.63
LMCD1-204ENST00000426878 VCANP13611 3396 aa18.97■□□□□ 0.63
LMCD1-204ENST00000426878 BRWD1Q9NSI6 2320 aa18.97■□□□□ 0.63
LMCD1-204ENST00000426878 NPTXRO95502 500 aa18.97■□□□□ 0.63
LMCD1-204ENST00000426878 BRD1O95696 1058 aa18.97■□□□□ 0.63
LMCD1-204ENST00000426878 ZNF131P52739 623 aa18.97■□□□□ 0.63
LMCD1-204ENST00000426878 BCAR1P56945 870 aa18.97■□□□□ 0.63
LMCD1-204ENST00000426878 BECN1Q14457 450 aa18.97■□□□□ 0.63
LMCD1-204ENST00000426878 COL19A1Q14993 1142 aa18.97■□□□□ 0.63
LMCD1-204ENST00000426878 SKIV2LQ15477 1246 aaKnown RBP18.97■□□□□ 0.63
LMCD1-204ENST00000426878 NT5DC1Q5TFE4 455 aa18.97■□□□□ 0.63
LMCD1-204ENST00000426878 RRAGBQ5VZM2 374 aa18.97■□□□□ 0.63
LMCD1-204ENST00000426878 CDR2LQ86X02 465 aaPredicted RBP18.97■□□□□ 0.63
LMCD1-204ENST00000426878 SLC39A11Q8N1S5 342 aa18.97■□□□□ 0.63
LMCD1-204ENST00000426878 REEP2Q9BRK0 252 aa18.97■□□□□ 0.63
LMCD1-204ENST00000426878 NXF3Q9H4D5 531 aaKnown RBP18.97■□□□□ 0.63
LMCD1-204ENST00000426878 NRDE2Q9H7Z3 1164 aa18.97■□□□□ 0.63
LMCD1-204ENST00000426878 INPP5FQ9Y2H2 1132 aa18.97■□□□□ 0.63
LMCD1-204ENST00000426878 HES2Q9Y543 173 aa18.97■□□□□ 0.63
LMCD1-204ENST00000426878 ATG2AQ2TAZ0 1938 aa18.96■□□□□ 0.63
LMCD1-204ENST00000426878 NPHP3-ACAD11A0A0J9YXS1 232 aa18.96■□□□□ 0.63
LMCD1-204ENST00000426878 ARL5CA6NH57 179 aa18.96■□□□□ 0.63
LMCD1-204ENST00000426878 SCP2P22307 547 aa18.96■□□□□ 0.63
LMCD1-204ENST00000426878 AFF1P51825 1210 aaKnown RBP18.96■□□□□ 0.63
LMCD1-204ENST00000426878 GIT2Q14161 759 aa18.96■□□□□ 0.63
LMCD1-204ENST00000426878 TCEAL5Q5H9L2 206 aa18.96■□□□□ 0.63
LMCD1-204ENST00000426878 ATF7IP2Q5U623 682 aa18.96■□□□□ 0.63
LMCD1-204ENST00000426878 PDE12Q6L8Q7 609 aaKnown RBP18.96■□□□□ 0.63
LMCD1-204ENST00000426878 CCDC73Q6ZRK6 1079 aa18.96■□□□□ 0.63
LMCD1-204ENST00000426878 TAS1R3Q7RTX0 852 aa18.96■□□□□ 0.63
LMCD1-204ENST00000426878 TMEM161BQ8NDZ6 487 aa18.96■□□□□ 0.63
LMCD1-204ENST00000426878 KCNG4Q8TDN1 519 aa18.96■□□□□ 0.63
LMCD1-204ENST00000426878 MRPS27Q92552 414 aaKnown RBP18.96■□□□□ 0.63
LMCD1-204ENST00000426878 HLA-CQ95604 372 aa18.96■□□□□ 0.63
LMCD1-204ENST00000426878 ADPGKQ9BRR6 497 aa18.96■□□□□ 0.63
LMCD1-204ENST00000426878 PUF60Q9UHX1 559 aaKnown RBP18.96■□□□□ 0.63
LMCD1-204ENST00000426878 CFAP45Q9UL16 551 aa18.96■□□□□ 0.63
LMCD1-204ENST00000426878 TNFSF13BQ9Y275 285 aa18.96■□□□□ 0.63
LMCD1-204ENST00000426878 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.95■□□□□ 0.62
LMCD1-204ENST00000426878 H0YCG3 227 aa18.95■□□□□ 0.62
LMCD1-204ENST00000426878 SLC16A4O15374 487 aa18.95■□□□□ 0.62
LMCD1-204ENST00000426878 NCK2O43639 380 aa18.95■□□□□ 0.62
LMCD1-204ENST00000426878 GALTP07902 379 aa18.95■□□□□ 0.62
LMCD1-204ENST00000426878 LIG1P18858 919 aa18.95■□□□□ 0.62
LMCD1-204ENST00000426878 NCKAP1LP55160 1127 aa18.95■□□□□ 0.62
LMCD1-204ENST00000426878 KRT17Q04695 432 aa18.95■□□□□ 0.62
LMCD1-204ENST00000426878 RNASELQ05823 741 aaKnown RBP18.95■□□□□ 0.62
LMCD1-204ENST00000426878 DHX8Q14562 1220 aaKnown RBP18.95■□□□□ 0.62
LMCD1-204ENST00000426878 DCAF4L1Q3SXM0 396 aa18.95■□□□□ 0.62
LMCD1-204ENST00000426878 APBB1IPQ7Z5R6 666 aaPredicted RBP18.95■□□□□ 0.62
LMCD1-204ENST00000426878 GAD1Q99259 594 aa18.95■□□□□ 0.62
LMCD1-204ENST00000426878 ACO2Q99798 780 aaKnown RBP18.95■□□□□ 0.62
LMCD1-204ENST00000426878 MRPL4Q9BYD3 311 aaKnown RBP18.95■□□□□ 0.62
LMCD1-204ENST00000426878 PTPRHQ9HD43 1115 aa18.95■□□□□ 0.62
LMCD1-204ENST00000426878 TLR9Q9NR96 1032 aa18.95■□□□□ 0.62
LMCD1-204ENST00000426878 USP20Q9Y2K6 914 aa18.95■□□□□ 0.62
LMCD1-204ENST00000426878 ZDHHC9Q9Y397 364 aa18.95■□□□□ 0.62
LMCD1-204ENST00000426878 CUTAO60888 179 aa18.94■□□□□ 0.62
LMCD1-204ENST00000426878 ZC3H11AO75152 810 aaKnown RBP eCLIP18.94■□□□□ 0.62
LMCD1-204ENST00000426878 DDHD2O94830 711 aa18.94■□□□□ 0.62
LMCD1-204ENST00000426878 MAPTP10636 758 aaKnown RBP18.94■□□□□ 0.62
LMCD1-204ENST00000426878 PBX3P40426 434 aa18.94■□□□□ 0.62
LMCD1-204ENST00000426878 MLH1P40692 756 aa18.94■□□□□ 0.62
LMCD1-204ENST00000426878 MRPS5P82675 430 aaKnown RBP18.94■□□□□ 0.62
LMCD1-204ENST00000426878 TMEM132AQ24JP5 1023 aa18.94■□□□□ 0.62
LMCD1-204ENST00000426878 EEF1DP3Q658K8 133 aa18.94■□□□□ 0.62
LMCD1-204ENST00000426878 ZNF280BQ86YH2 543 aa18.94■□□□□ 0.62
LMCD1-204ENST00000426878 GSTCDQ8NEC7 633 aa18.94■□□□□ 0.62
LMCD1-204ENST00000426878 PPP2R3CQ969Q6 453 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms