RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 SYT2Q8N9I0 419 aaPredicted RBP16.04■□□□□ 0.16
NCKIPSD-205ENST00000426678 ADPGKQ9BRR6 497 aa16.04■□□□□ 0.16
NCKIPSD-205ENST00000426678 CCDC113Q9H0I3 377 aa16.04■□□□□ 0.16
NCKIPSD-205ENST00000426678 NRDE2Q9H7Z3 1164 aa16.04■□□□□ 0.16
NCKIPSD-205ENST00000426678 HES2Q9Y543 173 aa16.04■□□□□ 0.16
NCKIPSD-205ENST00000426678 PCDHGC5Q9Y5F6 944 aa16.04■□□□□ 0.16
NCKIPSD-205ENST00000426678 TCF20Q9UGU0 1960 aaKnown RBP16.04■□□□□ 0.16
NCKIPSD-205ENST00000426678 PHLPP2Q6ZVD8 1323 aa16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 NT5C1B-RDH14C9J2C7 533 aa16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 H3BQ06 376 aaPredicted RBP16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 ACKR2O00590 384 aa16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 POMCP01189 267 aa16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 BMP1P13497 986 aa16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 GUCY2CP25092 1073 aa16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 MARCKSP29966 332 aaPredicted RBP16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 MLH1P40692 756 aa16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 NPTX2P47972 431 aa16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 NRIP1P48552 1158 aa16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 ERVFC1P60507 584 aa16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 CEBPZQ03701 1054 aaKnown RBP16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 RAD51AP2Q09MP3 1159 aa16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 BMS1Q14692 1282 aaKnown RBP16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 COL19A1Q14993 1142 aa16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 PTPAQ15257 358 aa16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 PLPP4Q5VZY2 271 aa16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 DAW1Q8N136 415 aa16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 UHRF1Q96T88 793 aaPredicted RBP16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 GAD1Q99259 594 aa16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 TCF25Q9BQ70 676 aa16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 RNF39Q9H2S5 420 aa16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 PDZD7Q9H5P4 517 aa16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 TLE6Q9H808 572 aa16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 NGRNQ9NPE2 291 aaKnown RBP16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 KMT5AQ9NQR1 393 aa16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 KCND2Q9NZV8 630 aa16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 PARP2Q9UGN5 583 aa16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 GIT1Q9Y2X7 761 aa16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 MYH11P35749 1972 aa16.03■□□□□ 0.16
NCKIPSD-205ENST00000426678 ZMYM2Q9UBW7 1377 aa16.02■□□□□ 0.16
NCKIPSD-205ENST00000426678 TDRD15B5MCY1 1934 aaKnown RBP16.02■□□□□ 0.16
NCKIPSD-205ENST00000426678 MYH15Q9Y2K3 1946 aa16.02■□□□□ 0.16
NCKIPSD-205ENST00000426678 FSD2A1L4K1 749 aa16.02■□□□□ 0.16
NCKIPSD-205ENST00000426678 ARL5CA6NH57 179 aa16.02■□□□□ 0.16
NCKIPSD-205ENST00000426678 K7ERI5 159 aa16.02■□□□□ 0.16
NCKIPSD-205ENST00000426678 FSCN2O14926 492 aa16.02■□□□□ 0.16
NCKIPSD-205ENST00000426678 GALTP07902 379 aa16.02■□□□□ 0.16
NCKIPSD-205ENST00000426678 CA8P35219 290 aa16.02■□□□□ 0.16
NCKIPSD-205ENST00000426678 GTF2F1P35269 517 aaKnown RBP eCLIP16.02■□□□□ 0.16
NCKIPSD-205ENST00000426678 SLC12A3P55017 1021 aa16.02■□□□□ 0.16
NCKIPSD-205ENST00000426678 GRIN1Q05586 938 aa16.02■□□□□ 0.16
NCKIPSD-205ENST00000426678 MAPK7Q13164 816 aa16.02■□□□□ 0.16
NCKIPSD-205ENST00000426678 KARSQ15046 597 aaKnown RBP16.02■□□□□ 0.16
NCKIPSD-205ENST00000426678 PUS10Q3MIT2 529 aaKnown RBP16.02■□□□□ 0.16
NCKIPSD-205ENST00000426678 TMC7Q7Z402 723 aa16.02■□□□□ 0.16
NCKIPSD-205ENST00000426678 RBM23Q86U06 439 aaKnown RBP16.02■□□□□ 0.16
NCKIPSD-205ENST00000426678 ZNF280BQ86YH2 543 aa16.02■□□□□ 0.16
NCKIPSD-205ENST00000426678 RPS6KC1Q96S38 1066 aa16.02■□□□□ 0.16
NCKIPSD-205ENST00000426678 TMEM175Q9BSA9 504 aa16.02■□□□□ 0.16
NCKIPSD-205ENST00000426678 C17orf75Q9HAS0 396 aa16.02■□□□□ 0.16
NCKIPSD-205ENST00000426678 DNAJB4Q9UDY4 337 aa16.02■□□□□ 0.16
NCKIPSD-205ENST00000426678 CUL9Q8IWT3 2517 aa16.02■□□□□ 0.15
NCKIPSD-205ENST00000426678 TTLL13PA6NNM8 815 aa16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 INPPL1O15357 1258 aa16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 DDHD2O94830 711 aa16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 PDIA4P13667 645 aaKnown RBP16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 PLCG1P19174 1290 aa16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 AKAP5P24588 427 aa16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 TXLNAP40222 546 aa16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 SLC11A1P49279 550 aa16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 NDUFV1P49821 464 aa16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 SCNN1GP51170 649 aa16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 AFF1P51825 1210 aaKnown RBP16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 DHX8Q14562 1220 aaKnown RBP16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 SMC1AQ14683 1233 aaKnown RBP16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 CTC1Q2NKJ3 1217 aa16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 DCAF4L1Q3SXM0 396 aa16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 PTCRAQ6ISU1 281 aaPredicted RBP16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 APBB1IPQ7Z5R6 666 aaPredicted RBP16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 GPBP1Q86WP2 473 aa16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 TMEM173Q86WV6 379 aaPredicted RBP16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 EFHBQ8N7U6 833 aa16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 IGSF21Q96ID5 467 aa16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 ZFP42Q96MM3 310 aa16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 USP28Q96RU2 1077 aa16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 CDCA3Q99618 268 aaPredicted RBP16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 ARHGAP28Q9P2N2 729 aa16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 DAXXQ9UER7 740 aaPredicted RBP16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 KCNG1Q9UIX4 513 aa16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 FBXO2Q9UK22 296 aaPredicted RBP16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 FAM50BQ9Y247 325 aa16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 USP20Q9Y2K6 914 aa16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 RBM19Q9Y4C8 960 aaKnown RBP16.01■□□□□ 0.15
NCKIPSD-205ENST00000426678 SFI1A8K8P3 1242 aa16■□□□□ 0.15
NCKIPSD-205ENST00000426678 LINC01565O15544 149 aa16■□□□□ 0.15
NCKIPSD-205ENST00000426678 B4GALT3O60512 393 aa16■□□□□ 0.15
NCKIPSD-205ENST00000426678 ALDH2P05091 517 aa16■□□□□ 0.15
NCKIPSD-205ENST00000426678 KRT18P05783 430 aaKnown RBP16■□□□□ 0.15
NCKIPSD-205ENST00000426678 PLS3P13797 630 aa16■□□□□ 0.15
NCKIPSD-205ENST00000426678 LTBRP36941 435 aa16■□□□□ 0.15
NCKIPSD-205ENST00000426678 SMTNP53814 917 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms