RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 LRRC15Q8TF66 581 aa20.27■□□□□ 0.84
SMARCAL1-205ENST00000425815 IGSF21Q96ID5 467 aa20.27■□□□□ 0.84
SMARCAL1-205ENST00000425815 PRIMPOLQ96LW4 560 aa20.27■□□□□ 0.84
SMARCAL1-205ENST00000425815 GAD1Q99259 594 aa20.27■□□□□ 0.84
SMARCAL1-205ENST00000425815 PLIN2Q99541 437 aa20.27■□□□□ 0.84
SMARCAL1-205ENST00000425815 VN1R3Q9BXE9 311 aa20.27■□□□□ 0.84
SMARCAL1-205ENST00000425815 GBP3Q9H0R5 595 aa20.27■□□□□ 0.84
SMARCAL1-205ENST00000425815 NXF3Q9H4D5 531 aaKnown RBP20.27■□□□□ 0.84
SMARCAL1-205ENST00000425815 UBN1Q9NPG3 1134 aa20.27■□□□□ 0.84
SMARCAL1-205ENST00000425815 FOXD4L1Q9NU39 408 aa20.27■□□□□ 0.84
SMARCAL1-205ENST00000425815 BRWD1Q9NSI6 2320 aa20.27■□□□□ 0.84
SMARCAL1-205ENST00000425815 PLXNA4Q9HCM2 1894 aa20.26■□□□□ 0.83
SMARCAL1-205ENST00000425815 VPS37CA5D8V6 355 aaPredicted RBP20.26■□□□□ 0.83
SMARCAL1-205ENST00000425815 ARL5CA6NH57 179 aa20.26■□□□□ 0.83
SMARCAL1-205ENST00000425815 K7ELQ4 463 aaPredicted RBP20.26■□□□□ 0.83
SMARCAL1-205ENST00000425815 ACKR2O00590 384 aa20.26■□□□□ 0.83
SMARCAL1-205ENST00000425815 NPTXRO95502 500 aa20.26■□□□□ 0.83
SMARCAL1-205ENST00000425815 AKAP5P24588 427 aa20.26■□□□□ 0.83
SMARCAL1-205ENST00000425815 RNASELQ05823 741 aaKnown RBP20.26■□□□□ 0.83
SMARCAL1-205ENST00000425815 RESTQ13127 1097 aa20.26■□□□□ 0.83
SMARCAL1-205ENST00000425815 SF3A1Q15459 793 aaKnown RBP20.26■□□□□ 0.83
SMARCAL1-205ENST00000425815 CLUL1Q15846 466 aa20.26■□□□□ 0.83
SMARCAL1-205ENST00000425815 PUS10Q3MIT2 529 aaKnown RBP20.26■□□□□ 0.83
SMARCAL1-205ENST00000425815 FAM178BQ8IXR5 827 aa20.26■□□□□ 0.83
SMARCAL1-205ENST00000425815 MRPL43Q8N983 215 aaKnown RBP20.26■□□□□ 0.83
SMARCAL1-205ENST00000425815 DEPTORQ8TB45 409 aa20.26■□□□□ 0.83
SMARCAL1-205ENST00000425815 URGCPQ8TCY9 931 aa20.26■□□□□ 0.83
SMARCAL1-205ENST00000425815 KIFAP3Q92845 792 aa20.26■□□□□ 0.83
SMARCAL1-205ENST00000425815 PPP2R3CQ969Q6 453 aa20.26■□□□□ 0.83
SMARCAL1-205ENST00000425815 ZFP42Q96MM3 310 aa20.26■□□□□ 0.83
SMARCAL1-205ENST00000425815 C2orf40Q9H1Z8 148 aa20.26■□□□□ 0.83
SMARCAL1-205ENST00000425815 PDZD7Q9H5P4 517 aa20.26■□□□□ 0.83
SMARCAL1-205ENST00000425815 NGRNQ9NPE2 291 aaKnown RBP20.26■□□□□ 0.83
SMARCAL1-205ENST00000425815 KANSL3Q9P2N6 904 aa20.26■□□□□ 0.83
SMARCAL1-205ENST00000425815 GIT1Q9Y2X7 761 aa20.26■□□□□ 0.83
SMARCAL1-205ENST00000425815 TCF20Q9UGU0 1960 aaKnown RBP20.25■□□□□ 0.83
SMARCAL1-205ENST00000425815 HIP1RO75146 1068 aa20.25■□□□□ 0.83
SMARCAL1-205ENST00000425815 PRKCBP05771 671 aa20.25■□□□□ 0.83
SMARCAL1-205ENST00000425815 PDCP20941 246 aa20.25■□□□□ 0.83
SMARCAL1-205ENST00000425815 MLH1P40692 756 aa20.25■□□□□ 0.83
SMARCAL1-205ENST00000425815 PPP2R5AQ15172 486 aa20.25■□□□□ 0.83
SMARCAL1-205ENST00000425815 PTPAQ15257 358 aa20.25■□□□□ 0.83
SMARCAL1-205ENST00000425815 ZRSR1Q15695 479 aaKnown RBP20.25■□□□□ 0.83
SMARCAL1-205ENST00000425815 MAPK6Q16659 721 aa20.25■□□□□ 0.83
SMARCAL1-205ENST00000425815 TMEM119Q4V9L6 283 aa20.25■□□□□ 0.83
SMARCAL1-205ENST00000425815 NT5DC1Q5TFE4 455 aa20.25■□□□□ 0.83
SMARCAL1-205ENST00000425815 FAM173BQ6P4H8 233 aa20.25■□□□□ 0.83
SMARCAL1-205ENST00000425815 TMC7Q7Z402 723 aa20.25■□□□□ 0.83
SMARCAL1-205ENST00000425815 DDX53Q86TM3 631 aaKnown RBP20.25■□□□□ 0.83
SMARCAL1-205ENST00000425815 COLGALT2Q8IYK4 626 aa20.25■□□□□ 0.83
SMARCAL1-205ENST00000425815 SNX21Q969T3 373 aa20.25■□□□□ 0.83
SMARCAL1-205ENST00000425815 APOL6Q9BWW8 343 aa20.25■□□□□ 0.83
SMARCAL1-205ENST00000425815 ENTPD7Q9NQZ7 604 aa20.25■□□□□ 0.83
SMARCAL1-205ENST00000425815 CLIC4Q9Y696 253 aa20.25■□□□□ 0.83
SMARCAL1-205ENST00000425815 C2orf71A6NGG8 1288 aa20.24■□□□□ 0.83
SMARCAL1-205ENST00000425815 NRP1O14786 923 aa20.24■□□□□ 0.83
SMARCAL1-205ENST00000425815 MBTPS2O43462 519 aa20.24■□□□□ 0.83
SMARCAL1-205ENST00000425815 ALDH2P05091 517 aa20.24■□□□□ 0.83
SMARCAL1-205ENST00000425815 NPTX2P47972 431 aa20.24■□□□□ 0.83
SMARCAL1-205ENST00000425815 SCNN1GP51170 649 aa20.24■□□□□ 0.83
SMARCAL1-205ENST00000425815 SLC12A3P55017 1021 aa20.24■□□□□ 0.83
SMARCAL1-205ENST00000425815 DSC1Q08554 894 aa20.24■□□□□ 0.83
SMARCAL1-205ENST00000425815 PRPF4BQ13523 1007 aaKnown RBP20.24■□□□□ 0.83
SMARCAL1-205ENST00000425815 EEF1DP3Q658K8 133 aa20.24■□□□□ 0.83
SMARCAL1-205ENST00000425815 CABP7Q86V35 215 aa20.24■□□□□ 0.83
SMARCAL1-205ENST00000425815 VPS52Q8N1B4 723 aa20.24■□□□□ 0.83
SMARCAL1-205ENST00000425815 SYT2Q8N9I0 419 aaPredicted RBP20.24■□□□□ 0.83
SMARCAL1-205ENST00000425815 KHSRPQ92945 711 aaKnown RBP eCLIP20.24■□□□□ 0.83
SMARCAL1-205ENST00000425815 TMEM169Q96HH4 297 aa20.24■□□□□ 0.83
SMARCAL1-205ENST00000425815 IFT74Q96LB3 600 aa20.24■□□□□ 0.83
SMARCAL1-205ENST00000425815 CDCA3Q99618 268 aaPredicted RBP20.24■□□□□ 0.83
SMARCAL1-205ENST00000425815 TMEM175Q9BSA9 504 aa20.24■□□□□ 0.83
SMARCAL1-205ENST00000425815 ZBP1Q9H171 429 aa20.24■□□□□ 0.83
SMARCAL1-205ENST00000425815 CXCL16Q9H2A7 254 aa20.24■□□□□ 0.83
SMARCAL1-205ENST00000425815 CD207Q9UJ71 328 aa20.24■□□□□ 0.83
SMARCAL1-205ENST00000425815 BARX2Q9UMQ3 279 aaPredicted RBP20.24■□□□□ 0.83
SMARCAL1-205ENST00000425815 MTMR6Q9Y217 621 aa20.24■□□□□ 0.83
SMARCAL1-205ENST00000425815 SFI1A8K8P3 1242 aa20.23■□□□□ 0.83
SMARCAL1-205ENST00000425815 CXCL14O95715 111 aa20.23■□□□□ 0.83
SMARCAL1-205ENST00000425815 LIG1P18858 919 aa20.23■□□□□ 0.83
SMARCAL1-205ENST00000425815 GUCY2CP25092 1073 aa20.23■□□□□ 0.83
SMARCAL1-205ENST00000425815 NDUFV1P49821 464 aa20.23■□□□□ 0.83
SMARCAL1-205ENST00000425815 PEX3P56589 373 aa20.23■□□□□ 0.83
SMARCAL1-205ENST00000425815 COASYQ13057 564 aa20.23■□□□□ 0.83
SMARCAL1-205ENST00000425815 ARSHQ5FYA8 562 aa20.23■□□□□ 0.83
SMARCAL1-205ENST00000425815 TMEM184AQ6ZMB5 413 aa20.23■□□□□ 0.83
SMARCAL1-205ENST00000425815 TAS1R3Q7RTX0 852 aa20.23■□□□□ 0.83
SMARCAL1-205ENST00000425815 KCTD17Q8N5Z5 321 aa20.23■□□□□ 0.83
SMARCAL1-205ENST00000425815 AUTS2Q8WXX7 1259 aa20.23■□□□□ 0.83
SMARCAL1-205ENST00000425815 AK8Q96MA6 479 aa20.23■□□□□ 0.83
SMARCAL1-205ENST00000425815 TRIM6Q9C030 488 aaPredicted RBP20.23■□□□□ 0.83
SMARCAL1-205ENST00000425815 KLK14Q9P0G3 267 aa20.23■□□□□ 0.83
SMARCAL1-205ENST00000425815 EFEMP2O95967 443 aa20.22■□□□□ 0.83
SMARCAL1-205ENST00000425815 BMP15O95972 392 aa20.22■□□□□ 0.83
SMARCAL1-205ENST00000425815 PLA2G4BP0C869 781 aa20.22■□□□□ 0.83
SMARCAL1-205ENST00000425815 CTSAP10619 480 aa20.22■□□□□ 0.83
SMARCAL1-205ENST00000425815 EFNA5P52803 228 aa20.22■□□□□ 0.83
SMARCAL1-205ENST00000425815 SMC1AQ14683 1233 aaKnown RBP20.22■□□□□ 0.83
SMARCAL1-205ENST00000425815 SMAD2Q15796 467 aaKnown RBP20.22■□□□□ 0.83
SMARCAL1-205ENST00000425815 NTPCRQ9BSD7 190 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms